RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 PDLIM3Q53GG5 364 aaPredicted RBP13.91□□□□□ -0.18
NUP50-203ENST00000407019 STUMQ69YW2 141 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 C1orf87Q8N0U7 546 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 OR4S2Q8NH73 311 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 DDB2Q92466 427 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 LEAP2Q969E1 77 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 SMIM7Q9BQ49 75 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 TMEM140Q9NV12 185 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 TTC28Q96AY4 2481 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 TRGV10A0A0A0MS01 117 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 A8MXE2 369 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 TMEM250H0YL14 139 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 TM4SF5O14894 197 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 CD40P25942 277 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 VDAC2P45880 294 aaPredicted RBP13.91□□□□□ -0.18
NUP50-203ENST00000407019 RELBQ01201 579 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 CYP2G1PQ6ZSU1 146 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.91□□□□□ -0.18
NUP50-203ENST00000407019 DIRC2Q96SL1 478 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 ZNF251Q9BRH9 671 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 CTDSP1Q9GZU7 261 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 HEYLQ9NQ87 328 aaPredicted RBP13.91□□□□□ -0.18
NUP50-203ENST00000407019 NDUFS6O75380 124 aaKnown RBP13.9□□□□□ -0.18
NUP50-203ENST00000407019 KBTBD11O94819 623 aa13.9□□□□□ -0.18
NUP50-203ENST00000407019 BMP5P22003 454 aa13.9□□□□□ -0.18
NUP50-203ENST00000407019 TNFSF4P23510 183 aa13.9□□□□□ -0.18
NUP50-203ENST00000407019 CDC34P49427 236 aaPredicted RBP13.9□□□□□ -0.18
NUP50-203ENST00000407019 CT45A1Q5HYN5 189 aa13.9□□□□□ -0.18
NUP50-203ENST00000407019 DUX4L9Q6RFH8 374 aaPredicted RBP13.9□□□□□ -0.18
NUP50-203ENST00000407019 Q8N7P7 452 aa13.9□□□□□ -0.18
NUP50-203ENST00000407019 CT45A3Q8NHU0 189 aa13.9□□□□□ -0.18
NUP50-203ENST00000407019 SPENQ96T58 3664 aaKnown RBP13.9□□□□□ -0.18
NUP50-203ENST00000407019 TRAV3A0A0B4J244 114 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 UTF1Q5T230 341 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 C1orf229Q6ZS94 237 aaPredicted RBP13.89□□□□□ -0.19
NUP50-203ENST00000407019 C22orf34Q6ZV56 151 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 GAFA1Q96PS6 74 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 SAA2-SAA4A0A096LPE2 208 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 SMCO3A2RU48 225 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 SOX15O60248 233 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 MPDU1O75352 247 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 SAA2P0DJI9 122 aaPredicted RBP13.89□□□□□ -0.19
NUP50-203ENST00000407019 THBS3P49746 956 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 TMEM241Q24JQ0 296 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 OR4F5Q8NH21 305 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 GATAD1Q8WUU5 269 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 RPUSD4Q96CM3 377 aaKnown RBP13.89□□□□□ -0.19
NUP50-203ENST00000407019 OR4F4Q96R69 305 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 GGACTQ9BVM4 153 aa13.89□□□□□ -0.19
NUP50-203ENST00000407019 TRGV8A0A0C4DH27 118 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 SEC14L6B5MCN3 397 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 RRHO14718 337 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 GFRA3O60609 400 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 S100A12P80511 92 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 ADIRFQ15847 76 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 NCMAPQ5T1S8 102 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 SLC16A13Q7RTY0 426 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 DEFB108BQ8NET1 73 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 NUP37Q8NFH4 326 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 OR13D1Q8NGV5 346 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 NANPQ8TBE9 248 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 FAM210BQ96KR6 192 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 TCF19Q9Y242 345 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 CFAP47Q6ZTR5 3102 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 SVILO95425 2214 aa13.88□□□□□ -0.19
NUP50-203ENST00000407019 CLN5O75503 358 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 OPN1MWP04001 364 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 OPN1MW2P0DN77 364 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 OPN1MW3P0DN78 364 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 CCKARP32238 428 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 TCF23Q7RTU1 214 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 PRSS33Q8NF86 280 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 CCL13Q99616 98 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 PARLQ9H300 379 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 IDI2-AS1Q9NZ38 188 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 ZNF729A6NN14 1252 aaPredicted RBP13.87□□□□□ -0.19
NUP50-203ENST00000407019 C15orf61A6NNL5 157 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 PRSS46E5RG02 174 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 PAGE4O60829 102 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 GYPAP02724 150 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 DEFA4P12838 97 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 IRF2P14316 349 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 MRPS11P82912 194 aaKnown RBP13.87□□□□□ -0.19
NUP50-203ENST00000407019 ZNF788Q6ZQV5 615 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 ZNF439Q8NDP4 499 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 ADTRPQ96IZ2 230 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 SSX3Q99909 188 aa13.87□□□□□ -0.19
NUP50-203ENST00000407019 ZFHX4Q86UP3 3567 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 TGOLN2O43493 480 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 HOXA5P20719 270 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 NDUFA6P56556 154 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 TMPRSS3P57727 454 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 TMEM108Q6UXF1 575 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 TREML4Q6UXN2 200 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 LYG1Q8N1E2 194 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 FAM216BQ8N7L0 139 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 NEIL1Q96FI4 390 aaPredicted RBP13.86□□□□□ -0.19
NUP50-203ENST00000407019 DOCK11Q5JSL3 2073 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 TRBV24-1A0A075B6N3 115 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 MKRN2OSH3BPM6 223 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms