RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 FCN1O00602 326 aa15.16■□□□□ 0.02
HOXA9-202ENST00000396345 CRYGBP07316 175 aa15.16■□□□□ 0.02
HOXA9-202ENST00000396345 F2RP25116 425 aa15.16■□□□□ 0.02
HOXA9-202ENST00000396345 UBE2KP61086 200 aa15.16■□□□□ 0.02
HOXA9-202ENST00000396345 RND3P61587 244 aa15.16■□□□□ 0.02
HOXA9-202ENST00000396345 SRSF4Q08170 494 aaKnown RBP15.16■□□□□ 0.02
HOXA9-202ENST00000396345 SURF2Q15527 256 aaPredicted RBP15.16■□□□□ 0.02
HOXA9-202ENST00000396345 CENPVQ7Z7K6 275 aaPredicted RBP15.16■□□□□ 0.02
HOXA9-202ENST00000396345 TCTEX1D1Q8N7M0 179 aa15.16■□□□□ 0.02
HOXA9-202ENST00000396345 TEX45Q8NA69 505 aa15.16■□□□□ 0.02
HOXA9-202ENST00000396345 NOL4LQ96MY1 436 aaPredicted RBP15.16■□□□□ 0.02
HOXA9-202ENST00000396345 TPSG1Q9NRR2 321 aa15.16■□□□□ 0.02
HOXA9-202ENST00000396345 LINC00527Q9UJ94 153 aa15.16■□□□□ 0.02
HOXA9-202ENST00000396345 HPRT1P00492 218 aa15.15■□□□□ 0.02
HOXA9-202ENST00000396345 HRASP01112 189 aa15.15■□□□□ 0.02
HOXA9-202ENST00000396345 CTSDP07339 412 aaPredicted RBP15.15■□□□□ 0.02
HOXA9-202ENST00000396345 PIGPP57054 158 aa15.15■□□□□ 0.02
HOXA9-202ENST00000396345 SHISA2Q6UWI4 295 aa15.15■□□□□ 0.02
HOXA9-202ENST00000396345 PPP1R27Q86WC6 154 aa15.15■□□□□ 0.02
HOXA9-202ENST00000396345 CHPT1Q8WUD6 406 aa15.15■□□□□ 0.02
HOXA9-202ENST00000396345 OR51J1Q9H342 316 aa15.15■□□□□ 0.02
HOXA9-202ENST00000396345 C14orf166Q9Y224 244 aaKnown RBP15.15■□□□□ 0.02
HOXA9-202ENST00000396345 PLXNB1O43157 2135 aa15.14■□□□□ 0.01
HOXA9-202ENST00000396345 MPPED1O15442 326 aa15.14■□□□□ 0.01
HOXA9-202ENST00000396345 CA2P00918 260 aa15.14■□□□□ 0.01
HOXA9-202ENST00000396345 SAA1P0DJI8 122 aaPredicted RBP15.14■□□□□ 0.01
HOXA9-202ENST00000396345 IL7P13232 177 aa15.14■□□□□ 0.01
HOXA9-202ENST00000396345 CX3CL1P78423 397 aa15.14■□□□□ 0.01
HOXA9-202ENST00000396345 VKORC1L1Q8N0U8 176 aa15.14■□□□□ 0.01
HOXA9-202ENST00000396345 STPG2Q8N412 459 aa15.14■□□□□ 0.01
HOXA9-202ENST00000396345 CCDC71LQ8N9Z2 235 aa15.14■□□□□ 0.01
HOXA9-202ENST00000396345 AIFM2Q9BRQ8 373 aa15.14■□□□□ 0.01
HOXA9-202ENST00000396345 PARP11Q9NR21 331 aa15.14■□□□□ 0.01
HOXA9-202ENST00000396345 COPZ2Q9P299 210 aa15.14■□□□□ 0.01
HOXA9-202ENST00000396345 GPR132Q9UNW8 380 aa15.14■□□□□ 0.01
HOXA9-202ENST00000396345 S1PR2O95136 353 aa15.13■□□□□ 0.01
HOXA9-202ENST00000396345 LPAR6P43657 344 aa15.13■□□□□ 0.01
HOXA9-202ENST00000396345 TAS2R31P59538 309 aa15.13■□□□□ 0.01
HOXA9-202ENST00000396345 PJVKQ0ZLH3 352 aa15.13■□□□□ 0.01
HOXA9-202ENST00000396345 ZNF562Q6V9R5 426 aa15.13■□□□□ 0.01
HOXA9-202ENST00000396345 OR5AU1Q8NGC0 362 aa15.13■□□□□ 0.01
HOXA9-202ENST00000396345 WIPF2Q8TF74 440 aaPredicted RBP15.13■□□□□ 0.01
HOXA9-202ENST00000396345 RHOVQ96L33 236 aa15.13■□□□□ 0.01
HOXA9-202ENST00000396345 SCGB3A2Q96PL1 93 aa15.13■□□□□ 0.01
HOXA9-202ENST00000396345 CITED1Q99966 193 aa15.13■□□□□ 0.01
HOXA9-202ENST00000396345 RTBDNQ9BSG5 229 aaPredicted RBP15.13■□□□□ 0.01
HOXA9-202ENST00000396345 PLEKHA2Q9HB19 425 aa15.13■□□□□ 0.01
HOXA9-202ENST00000396345 LINC00854A0A1B0GVQ3 168 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 PSMB11A5LHX3 300 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 NAP1L6A6NFF2 107 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 ATP6V0E1O15342 81 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 OR2A4O95047 310 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 IGF1P05019 195 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 NQO2P16083 231 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 GNB1P62873 340 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 NDPQ00604 133 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 ZNF585BQ52M93 769 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 SSX9Q7RTT3 188 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 C11orf44Q8N8P7 122 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 VSTM2AQ8TAG5 236 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 ABHD5Q8WTS1 349 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 OR2A7Q96R45 310 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 CCDC32Q9BV29 185 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 GON7Q9BXV9 100 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 WDR12Q9GZL7 423 aaKnown RBP15.12■□□□□ 0.01
HOXA9-202ENST00000396345 C5orf66Q9H5L9 145 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 FAM212BQ9NTI7 297 aaPredicted RBP15.12■□□□□ 0.01
HOXA9-202ENST00000396345 COMMD9Q9P000 198 aa15.12■□□□□ 0.01
HOXA9-202ENST00000396345 CREBL2O60519 120 aaPredicted RBP15.11■□□□□ 0.01
HOXA9-202ENST00000396345 CNIH1O95406 144 aa15.11■□□□□ 0.01
HOXA9-202ENST00000396345 VDAC1P21796 283 aa15.11■□□□□ 0.01
HOXA9-202ENST00000396345 SLC35B1P78383 322 aa15.11■□□□□ 0.01
HOXA9-202ENST00000396345 ZNF846Q147U1 533 aa15.11■□□□□ 0.01
HOXA9-202ENST00000396345 FXYD3Q14802 87 aa15.11■□□□□ 0.01
HOXA9-202ENST00000396345 PRSS8Q16651 343 aa15.11■□□□□ 0.01
HOXA9-202ENST00000396345 MRGPRG-AS1Q2M3A8 158 aa15.11■□□□□ 0.01
HOXA9-202ENST00000396345 C10orf99Q6UWK7 81 aa15.11■□□□□ 0.01
HOXA9-202ENST00000396345 ZNF329Q86UD4 541 aa15.11■□□□□ 0.01
HOXA9-202ENST00000396345 PUSL1Q8N0Z8 303 aaKnown RBP15.11■□□□□ 0.01
HOXA9-202ENST00000396345 R3HDM4Q96D70 268 aa15.11■□□□□ 0.01
HOXA9-202ENST00000396345 ZNF580Q9UK33 172 aa15.11■□□□□ 0.01
HOXA9-202ENST00000396345 VSIG4Q9Y279 399 aa15.11■□□□□ 0.01
HOXA9-202ENST00000396345 C3orf85A0A1B0GTC6 90 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 CENPXA8MT69 81 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 H0Y980 276 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 ARPC1BO15143 372 aaKnown RBP15.1■□□□□ 0.01
HOXA9-202ENST00000396345 FBXO24O75426 580 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 CD28P10747 220 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 CD40LGP29965 261 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 ERVK-16P61578 105 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 POU2AF1Q16633 256 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 OR4A47Q6IF82 309 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 MMD2Q8IY49 270 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 DMBX1Q8NFW5 382 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 ARPC1AQ92747 370 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 C7orf50Q9BRJ6 194 aaKnown RBP15.1■□□□□ 0.01
HOXA9-202ENST00000396345 ZNF430Q9H8G1 570 aaPredicted RBP15.1■□□□□ 0.01
HOXA9-202ENST00000396345 FBXO7Q9Y3I1 522 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 WSB1Q9Y6I7 421 aa15.1■□□□□ 0.01
HOXA9-202ENST00000396345 TRAV41A0A0B4J266 112 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms