RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 OR4C12Q96R67 309 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 ELOVL1Q9BW60 279 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 RANGRFQ9HD47 186 aaPredicted RBP10.62□□□□□ -0.71
CXCL12-205ENST00000395794 COA4Q9NYJ1 87 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 SPATA2Q9UM82 520 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 CBX5P45973 191 aa10.61□□□□□ -0.71
CXCL12-205ENST00000395794 CDK10Q15131 360 aa10.61□□□□□ -0.71
CXCL12-205ENST00000395794 OR2B11Q5JQS5 317 aa10.61□□□□□ -0.71
CXCL12-205ENST00000395794 IDO2Q6ZQW0 420 aa10.61□□□□□ -0.71
CXCL12-205ENST00000395794 HOGA1Q86XE5 327 aa10.61□□□□□ -0.71
CXCL12-205ENST00000395794 MMD2Q8IY49 270 aa10.61□□□□□ -0.71
CXCL12-205ENST00000395794 OR6Q1Q8NGQ2 317 aa10.61□□□□□ -0.71
CXCL12-205ENST00000395794 VSTM2AQ8TAG5 236 aa10.61□□□□□ -0.71
CXCL12-205ENST00000395794 USMG5Q96IX5 58 aa10.61□□□□□ -0.71
CXCL12-205ENST00000395794 SPIN2AQ99865 258 aa10.61□□□□□ -0.71
CXCL12-205ENST00000395794 SPIN2BQ9BPZ2 258 aa10.61□□□□□ -0.71
CXCL12-205ENST00000395794 AUNIPQ9H7T9 357 aa10.61□□□□□ -0.71
CXCL12-205ENST00000395794 ANKRD34BA5PLL1 514 aa10.6□□□□□ -0.71
CXCL12-205ENST00000395794 BRI3O95415 125 aa10.6□□□□□ -0.71
CXCL12-205ENST00000395794 NHLRC4P0CG21 123 aaPredicted RBP10.6□□□□□ -0.71
CXCL12-205ENST00000395794 APELAP0DMC3 54 aa10.6□□□□□ -0.71
CXCL12-205ENST00000395794 FCGR2CP31995 323 aa10.6□□□□□ -0.71
CXCL12-205ENST00000395794 SSBP2P81877 361 aaPredicted RBP10.6□□□□□ -0.71
CXCL12-205ENST00000395794 ZNF66Q6ZN08 573 aa10.6□□□□□ -0.71
CXCL12-205ENST00000395794 OVCH2Q7RTZ1 564 aa10.6□□□□□ -0.71
CXCL12-205ENST00000395794 SECTM1Q8WVN6 248 aa10.6□□□□□ -0.71
CXCL12-205ENST00000395794 SRSF12Q8WXF0 261 aaKnown RBP10.6□□□□□ -0.71
CXCL12-205ENST00000395794 AIFM2Q9BRQ8 373 aa10.6□□□□□ -0.71
CXCL12-205ENST00000395794 TINAGL1Q9GZM7 467 aaPredicted RBP10.6□□□□□ -0.71
CXCL12-205ENST00000395794 IFT46Q9NQC8 304 aa10.6□□□□□ -0.71
CXCL12-205ENST00000395794 TAS2R8Q9NYW2 309 aa10.6□□□□□ -0.71
CXCL12-205ENST00000395794 IGKV1D-13A0A0B4J2D9 117 aa10.59□□□□□ -0.71
CXCL12-205ENST00000395794 XRCC3O43542 346 aa10.59□□□□□ -0.71
CXCL12-205ENST00000395794 OR9G9P0C7N8 305 aa10.59□□□□□ -0.71
CXCL12-205ENST00000395794 SAA1P0DJI8 122 aaPredicted RBP10.59□□□□□ -0.71
CXCL12-205ENST00000395794 IGKV1-13P0DP09 117 aa10.59□□□□□ -0.71
CXCL12-205ENST00000395794 KIR2DS2P43631 304 aa10.59□□□□□ -0.71
CXCL12-205ENST00000395794 LSM3P62310 102 aaKnown RBP10.59□□□□□ -0.71
CXCL12-205ENST00000395794 TATDN3Q17R31 274 aa10.59□□□□□ -0.71
CXCL12-205ENST00000395794 UBE2NLQ5JXB2 153 aa10.59□□□□□ -0.71
CXCL12-205ENST00000395794 ACSM6Q6P461 480 aa10.59□□□□□ -0.71
CXCL12-205ENST00000395794 MFSD4AQ8N468 514 aa10.59□□□□□ -0.71
CXCL12-205ENST00000395794 GVQW1Q8N7I0 195 aa10.59□□□□□ -0.71
CXCL12-205ENST00000395794 OR13F1Q8NGS4 319 aa10.59□□□□□ -0.71
CXCL12-205ENST00000395794 ZNF430Q9H8G1 570 aaPredicted RBP10.59□□□□□ -0.71
CXCL12-205ENST00000395794 LSM4Q9Y4Z0 139 aaKnown RBP10.59□□□□□ -0.71
CXCL12-205ENST00000395794 DPPA5A6NC42 116 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 OR2A4O95047 310 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 HRASP01112 189 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 PPYP01298 95 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 IGLV2-14P01704 120 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 FCER2P06734 321 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 RPS19P39019 145 aaKnown RBP10.58□□□□□ -0.72
CXCL12-205ENST00000395794 RPL30P62888 115 aaKnown RBP10.58□□□□□ -0.72
CXCL12-205ENST00000395794 MSMO1Q15800 293 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 TMEM69Q5SWH9 247 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 C11orf87Q6NUJ2 197 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 SLC25A42Q86VD7 318 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 ANKRD13BQ86YJ7 626 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 SAMD12Q8N8I0 201 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 ZBTB34Q8NCN2 500 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 OR5AP2Q8NGF4 316 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 BORCS5Q969J3 196 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 YIPF6Q96EC8 236 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 OR2A7Q96R45 310 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 RSRP1Q9BUV0 290 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 SLC5A7Q9GZV3 580 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 PEF1Q9UBV8 284 aaKnown RBP10.58□□□□□ -0.72
CXCL12-205ENST00000395794 SMAD5-AS1Q9Y6J3 95 aa10.58□□□□□ -0.72
CXCL12-205ENST00000395794 FAM223BA6NKX1 122 aa10.57□□□□□ -0.72
CXCL12-205ENST00000395794 FXYD4P59646 89 aa10.57□□□□□ -0.72
CXCL12-205ENST00000395794 HERV-K104P61576 105 aa10.57□□□□□ -0.72
CXCL12-205ENST00000395794 CATR1Q13166 79 aa10.57□□□□□ -0.72
CXCL12-205ENST00000395794 FAM223AQ8IWN6 122 aa10.57□□□□□ -0.72
CXCL12-205ENST00000395794 VKORC1L1Q8N0U8 176 aa10.57□□□□□ -0.72
CXCL12-205ENST00000395794 ADAD2Q8NCV1 583 aaKnown RBP10.57□□□□□ -0.72
CXCL12-205ENST00000395794 CCL28Q9NRJ3 127 aa10.57□□□□□ -0.72
CXCL12-205ENST00000395794 SMIM31A0A1B0GVY4 71 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 MEIS3P1A6NDR6 274 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 TNFSF12O43508 249 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 KBTBD11O94819 623 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 PTHLHP12272 177 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 SPNP16150 400 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 MAS1LP35410 378 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 TGFBR1P36897 503 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 RHOGP84095 191 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 ATP5G2Q06055 141 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 MRGPRG-AS1Q2M3A8 158 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 ZNF343Q6P1L6 599 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 SPAG16Q8N0X2 631 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 GIMAP1Q8WWP7 306 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 SNAPC3Q92966 411 aa10.56□□□□□ -0.72
CXCL12-205ENST00000395794 DHFRP00374 187 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 GP9P14770 177 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 RPL27AP46776 148 aaKnown RBP10.55□□□□□ -0.72
CXCL12-205ENST00000395794 TAS2R46P59540 309 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 TAS2R20P59543 309 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 DEFA5Q01523 94 aa10.55□□□□□ -0.72
CXCL12-205ENST00000395794 EIF4EBP1Q13541 118 aaPredicted RBP10.55□□□□□ -0.72
CXCL12-205ENST00000395794 DYRK1AQ13627 763 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms