RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 LMO7DNF2Z398 122 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 RPL36A-HNRNPH2H7BZ11 118 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 FRMD6-AS1P0C7T7 363 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 MPZP25189 248 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 RPL31P62899 125 aaKnown RBP7.48□□□□□ -1.21
RTN4-206ENST00000394611 PRB3Q04118 309 aaPredicted RBP7.48□□□□□ -1.21
RTN4-206ENST00000394611 ABHD17BQ5VST6 288 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 DNM1P46Q6ZS02 220 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 TMEM147Q9BVK8 224 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 OR2H1Q9GZK4 316 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 PRR19A6NJB7 356 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 ZNF891A8MT65 544 aaPredicted RBP7.48□□□□□ -1.21
RTN4-206ENST00000394611 MT-CO2P00403 227 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 NBL1P41271 181 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 LEMD1Q68G75 181 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 ZNF525Q8N782 197 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 OR4D5Q8NGN0 318 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 CLEC5AQ9NY25 188 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 WNK1Q9H4A3 2382 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 IGHV3OR15-7A0A075B7D8 119 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 B4E171 279 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 FAM157AC9JC47 383 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 CLPSP04118 112 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 RFPL3SP0C7P2 107 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 REG1BP48304 166 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 SUCLG1P53597 346 aaKnown RBP7.47□□□□□ -1.21
RTN4-206ENST00000394611 CD81P60033 236 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 RPEL1Q2QD12 228 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 CYP2G1PQ6ZSU1 146 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 KMT5CQ86Y97 462 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 WFDC3Q8IUB2 231 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 ZNF114Q8NC26 417 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 C22orf15Q8WYQ4 148 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 ZNF501Q96CX3 271 aaPredicted RBP7.47□□□□□ -1.21
RTN4-206ENST00000394611 DAZAP1Q96EP5 407 aaKnown RBP7.47□□□□□ -1.21
RTN4-206ENST00000394611 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.47□□□□□ -1.21
RTN4-206ENST00000394611 ZNF835Q9Y2P0 537 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 GJE1A6NN92 205 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 LILRA1O75019 489 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 IGKV1D-33P01593 117 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 IGKV1-33P01594 117 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 EPHA8P29322 1005 aaPredicted RBP7.47□□□□□ -1.21
RTN4-206ENST00000394611 ZNF726P1Q15940 193 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 C20orf204Q6ZNR8 217 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 RABEPKQ7Z6M1 372 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 KIR3DL3Q8N743 410 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 SFRP2Q96HF1 295 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 EGLN1Q9GZT9 426 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 A0A0U1RQV5 110 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 A0A1W2PQD3 144 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 AGFG2O95081 481 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 SRSF4Q08170 494 aaKnown RBP7.47□□□□□ -1.21
RTN4-206ENST00000394611 CPEB3Q8NE35 698 aaKnown RBP7.47□□□□□ -1.21
RTN4-206ENST00000394611 SAP25Q8TEE9 199 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 ASCL2Q99929 193 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 TMEM106BQ9NUM4 274 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 TAAR3PQ9P1P4 343 aa7.47□□□□□ -1.21
RTN4-206ENST00000394611 ODAMA1E959 279 aa7.46□□□□□ -1.21
RTN4-206ENST00000394611 RRP8O43159 456 aaKnown RBP7.46□□□□□ -1.21
RTN4-206ENST00000394611 NEURL1O76050 574 aa7.46□□□□□ -1.21
RTN4-206ENST00000394611 KRTCAP3Q53RY4 240 aa7.46□□□□□ -1.21
RTN4-206ENST00000394611 SLC35E1Q96K37 410 aa7.46□□□□□ -1.21
RTN4-206ENST00000394611 TMEM38BQ9NVV0 291 aa7.46□□□□□ -1.21
RTN4-206ENST00000394611 WIPI2Q9Y4P8 454 aa7.46□□□□□ -1.21
RTN4-206ENST00000394611 LOC389332A0A1B0GUA5 103 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 MT-CO3P00414 261 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 CGAP01215 116 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 CTXN2P0C2S0 81 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 ORM2P19652 201 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 RANP62826 216 aaKnown RBP7.46□□□□□ -1.22
RTN4-206ENST00000394611 TMEM211Q6ICI0 200 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 MMD2Q8IY49 270 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 LYG1Q8N1E2 194 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 DRAM1Q8N682 238 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 OR8B2Q96RD0 313 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 ALKBH7Q9BT30 221 aaPredicted RBP7.46□□□□□ -1.22
RTN4-206ENST00000394611 MRPL13Q9BYD1 178 aaKnown RBP7.46□□□□□ -1.22
RTN4-206ENST00000394611 SLC45A2Q9UMX9 530 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 VAMP5O95183 116 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 CLDN14O95500 239 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 NUDT3O95989 172 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 CEACAM8P31997 349 aaPredicted RBP7.46□□□□□ -1.22
RTN4-206ENST00000394611 TSPAN7P41732 249 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 UBE2G1P62253 170 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 ACSF3Q4G176 576 aaPredicted RBP7.46□□□□□ -1.22
RTN4-206ENST00000394611 ASCL5Q7RTU5 278 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 TCTEX1D1Q8N7M0 179 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 RBMXL3Q8N7X1 1067 aaKnown RBP7.46□□□□□ -1.22
RTN4-206ENST00000394611 ZNF738Q8NE65 137 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 OR5R1Q8NH85 324 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 OR5P3Q8WZ94 311 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 FLYWCH2Q96CP2 140 aaKnown RBP7.46□□□□□ -1.22
RTN4-206ENST00000394611 ANAPC16Q96DE5 110 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 ZNF355PQ9NSJ1 428 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 PXMP4Q9Y6I8 212 aa7.46□□□□□ -1.22
RTN4-206ENST00000394611 A0A087WWC5 75 aa7.45□□□□□ -1.22
RTN4-206ENST00000394611 SH2D7A6NKC9 451 aaPredicted RBP7.45□□□□□ -1.22
RTN4-206ENST00000394611 C17orf98A8MV24 154 aa7.45□□□□□ -1.22
RTN4-206ENST00000394611 CDX4O14627 284 aaPredicted RBP7.45□□□□□ -1.22
RTN4-206ENST00000394611 CD1BP29016 333 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms