RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 FXYD3Q14802 87 aa16.85■□□□□ 0.29
SHANK1-203ENST00000391813 PSMG4Q5JS54 123 aa16.85■□□□□ 0.29
SHANK1-203ENST00000391813 RAB37Q96AX2 223 aa16.85■□□□□ 0.29
SHANK1-203ENST00000391813 SPSB2Q99619 263 aa16.85■□□□□ 0.29
SHANK1-203ENST00000391813 C2orf88Q9BSF0 95 aa16.85■□□□□ 0.29
SHANK1-203ENST00000391813 GNG7O60262 68 aa16.85■□□□□ 0.29
SHANK1-203ENST00000391813 ZG16O60844 167 aa16.85■□□□□ 0.29
SHANK1-203ENST00000391813 GCHFRP30047 84 aa16.85■□□□□ 0.29
SHANK1-203ENST00000391813 NPBWR2P48146 333 aa16.85■□□□□ 0.29
SHANK1-203ENST00000391813 ATP5IP56385 69 aaPredicted RBP16.85■□□□□ 0.29
SHANK1-203ENST00000391813 RPL23P62829 140 aaKnown RBP16.85■□□□□ 0.29
SHANK1-203ENST00000391813 KIR2DL2P43627 348 aaPredicted RBP16.85■□□□□ 0.29
SHANK1-203ENST00000391813 ZNF83P51522 516 aa16.85■□□□□ 0.29
SHANK1-203ENST00000391813 RPL31P62899 125 aaKnown RBP16.85■□□□□ 0.29
SHANK1-203ENST00000391813 HES7Q9BYE0 225 aa16.85■□□□□ 0.29
SHANK1-203ENST00000391813 MGST3O14880 152 aa16.84■□□□□ 0.29
SHANK1-203ENST00000391813 ARID2Q68CP9 1835 aa16.84■□□□□ 0.29
SHANK1-203ENST00000391813 TBX6O95947 436 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-203ENST00000391813 CEACAM3P40198 252 aa16.84■□□□□ 0.29
SHANK1-203ENST00000391813 FZR1Q9UM11 496 aa16.84■□□□□ 0.29
SHANK1-203ENST00000391813 ZNF716A6NP11 495 aa16.84■□□□□ 0.29
SHANK1-203ENST00000391813 OR4A8P0C604 315 aa16.84■□□□□ 0.29
SHANK1-203ENST00000391813 HSPE1P61604 102 aaKnown RBP16.84■□□□□ 0.29
SHANK1-203ENST00000391813 TMEM136Q6ZRR5 245 aa16.84■□□□□ 0.29
SHANK1-203ENST00000391813 ASCL3Q9NQ33 180 aa16.84■□□□□ 0.29
SHANK1-203ENST00000391813 OR2H2O95918 312 aa16.84■□□□□ 0.29
SHANK1-203ENST00000391813 INO80CQ6PI98 192 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-203ENST00000391813 C14orf144Q96I85 54 aa16.84■□□□□ 0.29
SHANK1-203ENST00000391813 HIGD1AQ9Y241 93 aa16.84■□□□□ 0.29
SHANK1-203ENST00000391813 A0A1B0GW64 132 aa16.83■□□□□ 0.29
SHANK1-203ENST00000391813 MARCH11A6NNE9 402 aa16.83■□□□□ 0.29
SHANK1-203ENST00000391813 CEACAM18A8MTB9 384 aa16.83■□□□□ 0.29
SHANK1-203ENST00000391813 NUDT3O95989 172 aa16.83■□□□□ 0.29
SHANK1-203ENST00000391813 SLC25A40Q8TBP6 338 aa16.83■□□□□ 0.29
SHANK1-203ENST00000391813 LINC00614P0C842 121 aa16.83■□□□□ 0.28
SHANK1-203ENST00000391813 MAGEA5P43359 124 aa16.83■□□□□ 0.28
SHANK1-203ENST00000391813 KCNMB1Q16558 191 aa16.83■□□□□ 0.28
SHANK1-203ENST00000391813 GRAMD2BQ96HH9 432 aa16.83■□□□□ 0.28
SHANK1-203ENST00000391813 SCNM1Q9BWG6 230 aa16.83■□□□□ 0.28
SHANK1-203ENST00000391813 CACNA1EQ15878 2313 aa16.83■□□□□ 0.28
SHANK1-203ENST00000391813 BMI1P35226 326 aa16.83■□□□□ 0.28
SHANK1-203ENST00000391813 RTP5Q14D33 572 aa16.83■□□□□ 0.28
SHANK1-203ENST00000391813 GPHA2Q96T91 129 aa16.83■□□□□ 0.28
SHANK1-203ENST00000391813 CENPWQ5EE01 88 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 PRNTQ86SH4 94 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 C1orf174Q8IYL3 243 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 MYO16Q9Y6X6 1858 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 A1L4Q6 167 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 SPINK2P20155 84 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 WNT10AQ9GZT5 417 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 PGPA6NDG6 321 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 SNAI3Q3KNW1 292 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 PYY3Q5JQD4 70 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 GATAD1Q8WUU5 269 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 MRPL32Q9BYC8 188 aaKnown RBP16.82■□□□□ 0.28
SHANK1-203ENST00000391813 CD3EP07766 207 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 CD40P25942 277 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 GPX4P36969 197 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-203ENST00000391813 NPCDR1Q9BY65 106 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 PRDM14Q9GZV8 571 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 RNF7Q9UBF6 113 aa16.82■□□□□ 0.28
SHANK1-203ENST00000391813 LOC389332A0A1B0GUA5 103 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 EGR1P18146 543 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 CKS2P33552 79 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 HOXA4Q00056 320 aaPredicted RBP16.81■□□□□ 0.28
SHANK1-203ENST00000391813 CALHM1Q8IU99 346 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 TMEM56-RWDD3S4R434 201 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 TMEM177Q53S58 311 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 FBXW9Q5XUX1 488 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 KCNS1Q96KK3 526 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 ZNF430Q9H8G1 570 aaPredicted RBP16.81■□□□□ 0.28
SHANK1-203ENST00000391813 DLEU1O43261 78 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 OTX1P32242 354 aaPredicted RBP16.81■□□□□ 0.28
SHANK1-203ENST00000391813 HBBP68871 147 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 TWIST1Q15672 202 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 TMEM189A5PLL7 270 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 C10orf128Q5T292 105 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 FAM222BQ8WU58 562 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 CYTL1Q9NRR1 136 aa16.81■□□□□ 0.28
SHANK1-203ENST00000391813 LOC107984156A0A0G2JMH3 177 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 AGFG2O95081 481 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 PRDX2P32119 198 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 IZUMO4Q1ZYL8 232 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 ZNF324BQ6AW86 544 aaPredicted RBP16.8■□□□□ 0.28
SHANK1-203ENST00000391813 ARL17AQ8IVW1 177 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 PRR7Q8TB68 274 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 NCOR1O75376 2440 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 NKX2-8O15522 239 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 ZNF256Q9Y2P7 627 aaPredicted RBP16.8■□□□□ 0.28
SHANK1-203ENST00000391813 IGHV1-45A0A0A0MS14 117 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 M0QZ24 198 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 AMBPP02760 352 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 SMIM13P0DJ93 91 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 COX5BP10606 129 aa16.8■□□□□ 0.28
SHANK1-203ENST00000391813 RSPO4Q2I0M5 234 aaPredicted RBP16.8■□□□□ 0.28
SHANK1-203ENST00000391813 SERF1AO75920 110 aa16.79■□□□□ 0.28
SHANK1-203ENST00000391813 C1QL2Q7Z5L3 287 aa16.79■□□□□ 0.28
SHANK1-203ENST00000391813 GCSAMQ8N6F7 178 aa16.79■□□□□ 0.28
SHANK1-203ENST00000391813 ZNF525Q8N782 197 aa16.79■□□□□ 0.28
SHANK1-203ENST00000391813 GFI1Q99684 422 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms