RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 A3GALT2U3KPV4 340 aa4.8□□□□□ -1.64
TRAV1-2-201ENST00000390423 A0A1B0GVY2 172 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 A0A1W2PN81 502 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 MEIS3P1A6NDR6 274 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 CXorf65A6NEN9 183 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 SHOXO15266 292 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 GABARAPO95166 117 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 PTHLHP12272 177 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 PSMB8P28062 276 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 PPIFP30405 207 aaKnown RBP4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 DUTP33316 252 aaKnown RBP4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 CHRNA7P36544 502 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 CRIP2P52943 208 aaPredicted RBP4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 TAS2R20P59543 309 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 VBP1P61758 197 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 EWSR1Q01844 656 aaKnown RBP eCLIP4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 OR2B11Q5JQS5 317 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 TMEM69Q5SWH9 247 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 ZNF660Q6AZW8 331 aaPredicted RBP4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 ACSM6Q6P461 480 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 KCTD9Q7L273 389 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 HOGA1Q86XE5 327 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 ZNF645Q8N7E2 425 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 GVQW1Q8N7I0 195 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 TCTEX1D1Q8N7M0 179 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 SAMD12Q8N8I0 201 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 BVESQ8NE79 360 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 GRPEL2Q8TAA5 225 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 MYOZ3Q8TDC0 251 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 SLC25A46Q96AG3 418 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 FLYWCH2Q96CP2 140 aaKnown RBP4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 ADTRPQ96IZ2 230 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 RNF5Q99942 180 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 FAM103A1Q9BTL3 118 aaKnown RBP4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 MRPS26Q9BYN8 205 aaKnown RBP4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 AUNIPQ9H7T9 357 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 IFT46Q9NQC8 304 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 PLA2G2EQ9NZK7 142 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 GAB2Q9UQC2 676 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 FOXA2Q9Y261 457 aaPredicted RBP4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 OR2W1Q9Y3N9 320 aa4.79□□□□□ -1.64
TRAV1-2-201ENST00000390423 IGKV1D-13A0A0B4J2D9 117 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 LINC00473A8K010 186 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 FCN1O00602 326 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 XRCC3O43542 346 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 CRYZL1O95825 349 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 HLA-DQB1P01920 261 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 EIF4EP06730 217 aaKnown RBP4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 IGKV1-13P0DP09 117 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 RRASP10301 218 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 AADACP22760 399 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 CBX5P45973 191 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 TAGLNQ01995 201 aaKnown RBP4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 TMEM177Q53S58 311 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 C19orf54Q5BKX5 351 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 TMEM65Q6PI78 240 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 UNQ5815/PRO19632Q6UWF5 114 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 PPP1R27Q86WC6 154 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 CASTOR1Q8WTX7 329 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 SECTM1Q8WVN6 248 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 TCTEX1D2Q8WW35 142 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 SNAPC3Q92966 411 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 KCTD12Q96CX2 325 aaKnown RBP4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 S100A16Q96FQ6 103 aaKnown RBP4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 NAA50Q9GZZ1 169 aaKnown RBP4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 COMMD3Q9UBI1 195 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 MRPS7Q9Y2R9 242 aaKnown RBP4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 RBMX2Q9Y388 322 aaKnown RBP4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 PRELID3BQ9Y3B1 194 aa4.78□□□□□ -1.64
TRAV1-2-201ENST00000390423 IGHV4OR15-8A0A075B7B6 117 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 A0A087WW49 117 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 ARPC1BO15143 372 aaKnown RBP4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 SOX15O60248 233 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 FCGR3BO75015 233 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 TUSC2O75896 110 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 SLC22A5O76082 557 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 CNIH1O95406 144 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 PPYP01298 95 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 IGLV1-40P01703 118 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 IGLV2-14P01704 120 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 IGLV2-23P01705 113 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 SAA1P0DJI8 122 aaPredicted RBP4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 EGR2P11161 476 aaPredicted RBP4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 FCGR2CP31995 323 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 LGALS7P47929 136 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 TPPP2P59282 170 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 FXYD4P59646 89 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 HERV-K104P61576 105 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 RPL30P62888 115 aaKnown RBP4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 SSBP2P81877 361 aaPredicted RBP4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 RUNX1Q01196 453 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 TMEM267Q0VDI3 215 aaPredicted RBP4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 FXYD3Q14802 87 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 CDK10Q15131 360 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 TNXAQ16473 311 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 VMA21Q3ZAQ7 101 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 ACTBL2Q562R1 376 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 GPR107Q5VW38 600 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 PYHIN1Q6K0P9 492 aa4.77□□□□□ -1.65
TRAV1-2-201ENST00000390423 ZNF562Q6V9R5 426 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms