RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 CEACAM4O75871 244 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 SCTP09683 121 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 WNT5AP41221 380 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 HCP5Q6MZN7 132 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 SELENOHQ8IZQ5 122 aaKnown RBP6.09□□□□□ -1.43
CCDC171-201ENST00000380701 TEX45Q8NA69 505 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 DCAF16Q9NXF7 216 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 FBXL7Q9UJT9 491 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 TRAV20A0A0B4J274 112 aa6.09□□□□□ -1.44
CCDC171-201ENST00000380701 CENPVL1A0A0U1RR11 272 aa6.09□□□□□ -1.44
CCDC171-201ENST00000380701 GDF9O60383 454 aa6.09□□□□□ -1.44
CCDC171-201ENST00000380701 CKS2P33552 79 aa6.09□□□□□ -1.44
CCDC171-201ENST00000380701 BMPERQ8N8U9 685 aa6.09□□□□□ -1.44
CCDC171-201ENST00000380701 NPDC1Q9NQX5 325 aaPredicted RBP6.09□□□□□ -1.44
CCDC171-201ENST00000380701 RPRMQ9NS64 109 aa6.09□□□□□ -1.44
CCDC171-201ENST00000380701 FBLN5Q9UBX5 448 aa6.09□□□□□ -1.44
CCDC171-201ENST00000380701 SCN10AQ9Y5Y9 1956 aa6.09□□□□□ -1.44
CCDC171-201ENST00000380701 CDK5RAP2Q96SN8 1893 aa6.09□□□□□ -1.44
CCDC171-201ENST00000380701 NBR2O15453 112 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 TIAF1O95411 115 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 IL11P20809 199 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 ASIPP42127 132 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 SUCLG1P53597 346 aaKnown RBP6.08□□□□□ -1.44
CCDC171-201ENST00000380701 IBA57Q5T440 356 aaKnown RBP6.08□□□□□ -1.44
CCDC171-201ENST00000380701 GPR146Q96CH1 333 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 VWCEQ96DN2 955 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 AQP10Q96PS8 301 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 IFI27L2Q9H2X8 130 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 RNF114Q9Y508 228 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 IGHV3-72A0A0B4J1Y9 119 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 CRXO43186 299 aaPredicted RBP6.08□□□□□ -1.44
CCDC171-201ENST00000380701 YPEL1O60688 119 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 ZNF324O75467 553 aaPredicted RBP6.08□□□□□ -1.44
CCDC171-201ENST00000380701 LHX2P50458 406 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 INSL4Q14641 139 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 IGSF11Q5DX21 431 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 C17orf82Q86X59 251 aaPredicted RBP6.08□□□□□ -1.44
CCDC171-201ENST00000380701 LRTM2Q8N967 370 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 YPEL2Q96QA6 119 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 MIXL1Q9H2W2 232 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 CBY1Q9Y3M2 126 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 NPIPB7O75200 414 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 UMODP07911 640 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 HKR1P10072 659 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 GLIPR1P48060 266 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 MFAP2P55001 183 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 UNC119Q13432 240 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 PDZD11Q5EBL8 140 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 LINC01590Q5TEZ4 76 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.08□□□□□ -1.44
CCDC171-201ENST00000380701 CXorf65A6NEN9 183 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 WNT2P09544 360 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 IGHV1-2P23083 117 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 PRSS12P56730 875 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 PMCHL1Q16048 86 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 SNAI3Q3KNW1 292 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 TPRX1Q8N7U7 411 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 SLC25A28Q96A46 364 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 TRAV39A0A0B4J263 110 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 TMEM250H0YL14 139 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 H3BRM9 83 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 PHOX2AO14813 284 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 CLEC12BQ2HXU8 276 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 LRRC75AQ8NAA5 344 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 PRELID3AQ96N28 172 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 GEMIN7Q9H840 131 aaKnown RBP6.08□□□□□ -1.44
CCDC171-201ENST00000380701 PLSCR4Q9NRQ2 329 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 SEMA5BQ9P283 1151 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 A0A1B0GVG6 124 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 ADIPOQQ15848 244 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 CYP2G1PQ6ZSU1 146 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 GTSCR1Q86UQ5 136 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 DRAM1Q8N682 238 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 C9orf106Q8NAJ2 232 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 FBLIM1Q8WUP2 373 aa6.08□□□□□ -1.44
CCDC171-201ENST00000380701 APC2O95996 2303 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 H3BQ15 152 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 VENTXO95231 258 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 CSN3P07498 182 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 AWAT1Q58HT5 328 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 ZNF600Q6ZNG1 722 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 CIARTQ8N365 385 aaPredicted RBP6.07□□□□□ -1.44
CCDC171-201ENST00000380701 RAB37Q96AX2 223 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 NRTNQ99748 197 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 RBM38Q9H0Z9 239 aaKnown RBP6.07□□□□□ -1.44
CCDC171-201ENST00000380701 TMEM133Q9H2Q1 129 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 KCNE5Q9UJ90 142 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 IL4P05112 153 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 PMS2P11Q13670 270 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 MRPL54Q6P161 138 aaKnown RBP6.07□□□□□ -1.44
CCDC171-201ENST00000380701 PPP1R3EQ9H7J1 279 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 ZNF256Q9Y2P7 627 aaPredicted RBP6.07□□□□□ -1.44
CCDC171-201ENST00000380701 TNFRSF18Q9Y5U5 241 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 J3KRW8 73 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 HIST1H1AQ02539 215 aaPredicted RBP6.07□□□□□ -1.44
CCDC171-201ENST00000380701 PMCHL2Q9BQD1 86 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 TRAV9-1A0A075B6T8 112 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 A1L4Q6 167 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 PROB1E7EW31 1015 aa6.07□□□□□ -1.44
CCDC171-201ENST00000380701 PTBP3O95758 552 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms