RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TAS2R8Q9NYW2 309 aa13.03□□□□□ -0.32
HMGN4-201ENST00000377575 TNCP24821 2201 aa13.03□□□□□ -0.32
HMGN4-201ENST00000377575 C13orf42A0A1B0GVH6 325 aa13.02□□□□□ -0.33
HMGN4-201ENST00000377575 WI2-2373I1.2A0A1W2PRP0 233 aa13.02□□□□□ -0.33
HMGN4-201ENST00000377575 MEIS3P1A6NDR6 274 aa13.02□□□□□ -0.33
HMGN4-201ENST00000377575 IGHV3-11P01762 117 aa13.02□□□□□ -0.33
HMGN4-201ENST00000377575 KIR2DS2P43631 304 aa13.02□□□□□ -0.33
HMGN4-201ENST00000377575 INSL3P51460 131 aa13.02□□□□□ -0.33
HMGN4-201ENST00000377575 TAS2R20P59543 309 aa13.02□□□□□ -0.33
HMGN4-201ENST00000377575 VBP1P61758 197 aa13.02□□□□□ -0.33
HMGN4-201ENST00000377575 RPL30P62888 115 aaKnown RBP13.02□□□□□ -0.33
HMGN4-201ENST00000377575 EIF4EBP1Q13541 118 aaPredicted RBP13.02□□□□□ -0.33
HMGN4-201ENST00000377575 ZBTB34Q8NCN2 500 aa13.02□□□□□ -0.33
HMGN4-201ENST00000377575 OR5T1Q8NG75 326 aa13.02□□□□□ -0.33
HMGN4-201ENST00000377575 VSTM2AQ8TAG5 236 aa13.02□□□□□ -0.33
HMGN4-201ENST00000377575 ACOT12Q8WYK0 555 aa13.02□□□□□ -0.33
HMGN4-201ENST00000377575 IGHV4OR15-8A0A075B7B6 117 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 A0A087WW49 117 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 A0A0G2JLM5 398 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 OVOL1O14753 267 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 MPPED1O15442 326 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 HSPB1P04792 205 aaKnown RBP13.01□□□□□ -0.33
HMGN4-201ENST00000377575 FCER2P06734 321 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 SMIM18P0DKX4 95 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 HERV-K104P61576 105 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 MRGPRG-AS1Q2M3A8 158 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 MMD2Q8IY49 270 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 MFSD4AQ8N468 514 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 SRSF12Q8WXF0 261 aaKnown RBP13.01□□□□□ -0.33
HMGN4-201ENST00000377575 BORCS5Q969J3 196 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 RHOVQ96L33 236 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 CMTM3Q96MX0 182 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 SLC5A7Q9GZV3 580 aa13.01□□□□□ -0.33
HMGN4-201ENST00000377575 ZNF430Q9H8G1 570 aaPredicted RBP13.01□□□□□ -0.33
HMGN4-201ENST00000377575 SMIM31A0A1B0GVY4 71 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 BRI3O95415 125 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 APOA1P02647 267 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 PRSS3P35030 304 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 SLURP1P55000 103 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 TAS2R46P59540 309 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 FXYD4P59646 89 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 CATR1Q13166 79 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 DEFB121Q5J5C9 76 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 GIMAP1Q8WWP7 306 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 DCUN1D4Q92564 292 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 CCL28Q9NRJ3 127 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 COA4Q9NYJ1 87 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 EHFQ9NZC4 300 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 COMMD3Q9UBI1 195 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 ANAPC10Q9UM13 185 aa13□□□□□ -0.33
HMGN4-201ENST00000377575 MSGN1A6NI15 193 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 TNFSF12O43508 249 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 KBTBD11O94819 623 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 OR2A4O95047 310 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 GABARAPO95166 117 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 HRASP01112 189 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 EIF4EP06730 217 aaKnown RBP12.99□□□□□ -0.33
HMGN4-201ENST00000377575 ECI1P42126 302 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 RORCP51449 518 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 ZNF429Q86V71 674 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 TMEM17Q86X19 198 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 ANKRD13BQ86YJ7 626 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 OR5H2Q8NGV7 314 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 AP3S1Q92572 193 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 OR2A7Q96R45 310 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 SPIN2AQ99865 258 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 SPIN2BQ9BPZ2 258 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 MRPS26Q9BYN8 205 aaKnown RBP12.99□□□□□ -0.33
HMGN4-201ENST00000377575 TINAGL1Q9GZM7 467 aaPredicted RBP12.99□□□□□ -0.33
HMGN4-201ENST00000377575 SCOCQ9UIL1 159 aa12.99□□□□□ -0.33
HMGN4-201ENST00000377575 OR9G9P0C7N8 305 aa12.98□□□□□ -0.33
HMGN4-201ENST00000377575 APELAP0DMC3 54 aa12.98□□□□□ -0.33
HMGN4-201ENST00000377575 MZT2AQ6P582 158 aa12.98□□□□□ -0.33
HMGN4-201ENST00000377575 VKORC1L1Q8N0U8 176 aa12.98□□□□□ -0.33
HMGN4-201ENST00000377575 DLX4Q92988 240 aaPredicted RBP12.98□□□□□ -0.33
HMGN4-201ENST00000377575 USMG5Q96IX5 58 aa12.98□□□□□ -0.33
HMGN4-201ENST00000377575 AIFM2Q9BRQ8 373 aa12.98□□□□□ -0.33
HMGN4-201ENST00000377575 RANGRFQ9HD47 186 aaPredicted RBP12.98□□□□□ -0.33
HMGN4-201ENST00000377575 RBFOX2O43251 390 aaKnown RBP eCLIP12.97□□□□□ -0.33
HMGN4-201ENST00000377575 SAP30O75446 220 aa12.97□□□□□ -0.33
HMGN4-201ENST00000377575 NAT1P18440 290 aa12.97□□□□□ -0.33
HMGN4-201ENST00000377575 ZP3P21754 424 aa12.97□□□□□ -0.33
HMGN4-201ENST00000377575 MAS1LP35410 378 aa12.97□□□□□ -0.33
HMGN4-201ENST00000377575 DYRK1AQ13627 763 aa12.97□□□□□ -0.33
HMGN4-201ENST00000377575 ZNF818PQ6ZRF7 136 aa12.97□□□□□ -0.33
HMGN4-201ENST00000377575 SPAG16Q8N0X2 631 aa12.97□□□□□ -0.33
HMGN4-201ENST00000377575 PUSL1Q8N0Z8 303 aaKnown RBP12.97□□□□□ -0.33
HMGN4-201ENST00000377575 ADAD2Q8NCV1 583 aaKnown RBP12.97□□□□□ -0.33
HMGN4-201ENST00000377575 GPHA2Q96T91 129 aa12.97□□□□□ -0.33
HMGN4-201ENST00000377575 SCPEP1Q9HB40 452 aa12.97□□□□□ -0.33
HMGN4-201ENST00000377575 SULT1C2O00338 296 aa12.96□□□□□ -0.33
HMGN4-201ENST00000377575 PMP2P02689 132 aa12.96□□□□□ -0.33
HMGN4-201ENST00000377575 RFX2P48378 723 aa12.96□□□□□ -0.33
HMGN4-201ENST00000377575 BRWD1-AS2P59051 145 aa12.96□□□□□ -0.33
HMGN4-201ENST00000377575 CTF1Q16619 201 aa12.96□□□□□ -0.33
HMGN4-201ENST00000377575 AADACL3Q5VUY0 350 aa12.96□□□□□ -0.33
HMGN4-201ENST00000377575 SLC25A42Q86VD7 318 aa12.96□□□□□ -0.33
HMGN4-201ENST00000377575 TMEM167AQ8TBQ9 72 aa12.96□□□□□ -0.33
HMGN4-201ENST00000377575 CD300LFQ8TDQ1 290 aa12.96□□□□□ -0.33
HMGN4-201ENST00000377575 MOB3AQ96BX8 217 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms