RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 H1FXQ92522 213 aaKnown RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 CREB3L1Q96BA8 519 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 PRRT1Q99946 306 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 GINS4Q9BRT9 223 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 ZNF2Q9BSG1 426 aaPredicted RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 BEX2Q9BXY8 128 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 TOLLIPQ9H0E2 274 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 FXYD6Q9H0Q3 95 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 LINC00574Q9H8X3 128 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 BEX1Q9HBH7 125 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 NUDT15Q9NV35 164 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 CALYQ9NYX4 217 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 KCNIP1Q9NZI2 227 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 MGAT4AQ9UM21 535 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 NUBP2Q9Y5Y2 271 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 AUP1Q9Y679 476 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 YLPM1P49750 1951 aaKnown RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 ABCA2Q9BZC7 2435 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 TRGV10A0A0A0MS01 117 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 IGHV4-61A0A0C4DH41 118 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 KBTBD11-OT1A0A1B0GTJ5 212 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 hADV38S2A0JD32 116 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 F8WDY8 70 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 TOR1AO14656 332 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 PPYP01298 95 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 IGHV3-7P01780 117 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 CTXN2P0C2S0 81 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 PPP1CCP36873 323 aaKnown RBP2.88□□□□□ -1.95
MCF2-202ENST00000370573 HOXA1P49639 335 aaPredicted RBP2.88□□□□□ -1.95
MCF2-202ENST00000370573 FLI1Q01543 452 aaPredicted RBP2.88□□□□□ -1.95
MCF2-202ENST00000370573 PAX2Q02962 417 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 LTC4SQ16873 150 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 DEFB113Q30KQ7 82 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 PRAMEF5Q5TYX0 476 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 PRR27Q6MZM9 219 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 PLET1Q6UQ28 207 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 ZNF565Q8N9K5 539 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 OR8B3Q8NGG8 313 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 OR10V1Q8NGI7 309 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 OR52M1Q8NGK5 317 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 OR5M8Q8NGP6 311 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 OR6F1Q8NGZ6 308 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 OR10J5Q8NHC4 309 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 C8orf46Q8TAG6 207 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 TMEM230Q96A57 120 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 MOB3AQ96BX8 217 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 OR8B2Q96RD0 313 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 RTBDNQ9BSG5 229 aaPredicted RBP2.88□□□□□ -1.95
MCF2-202ENST00000370573 C20orf85Q9H1P6 137 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 C5orf66Q9H5L9 145 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 RDH8Q9NYR8 311 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 CLN8Q9UBY8 286 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 OPN4Q9UHM6 478 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 RPUSD1Q9UJJ7 312 aaKnown RBP2.88□□□□□ -1.95
MCF2-202ENST00000370573 SCP2D1Q9UJQ7 156 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 LINC00312Q9Y6C7 94 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 PRRC2AP48634 2157 aaKnown RBP2.88□□□□□ -1.95
MCF2-202ENST00000370573 CCDC168Q8NDH2 2452 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 LOC105371242A0A075B767 164 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 A0A096LNT2 108 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 LINC00862A6NCI5 91 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 ZNF729A6NN14 1252 aaPredicted RBP2.88□□□□□ -1.95
MCF2-202ENST00000370573 C17orf98A8MV24 154 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 NDUFS8O00217 210 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 SLC31A2O15432 143 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 SPINT2O43291 252 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 ZNF728P0DKX0 622 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 GNRHRP30968 328 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 CNN1P51911 297 aaKnown RBP2.88□□□□□ -1.95
MCF2-202ENST00000370573 DLX1P56177 255 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 FXYD4P59646 89 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 CD81P60033 236 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 DLK1P80370 383 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 PRB3Q04118 309 aaPredicted RBP2.88□□□□□ -1.95
MCF2-202ENST00000370573 RBMS2Q15434 407 aaKnown RBP2.88□□□□□ -1.95
MCF2-202ENST00000370573 CLEC12BQ2HXU8 276 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 ZFP69Q49AA0 526 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 MORN2Q502X0 79 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 MIDNQ504T8 468 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 CLEC2AQ6UVW9 174 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 SIGLEC15Q6ZMC9 328 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 SLC25A42Q86VD7 318 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 TMEM17Q86X19 198 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 ZDHHC22Q8N966 263 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 ZNF680Q8NEM1 530 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 LEAP2Q969E1 77 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 GALMQ96C23 342 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 SLC25A21Q9BQT8 299 aaPredicted RBP2.88□□□□□ -1.95
MCF2-202ENST00000370573 SEC22CQ9BRL7 303 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 ATG101Q9BSB4 218 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 GPN1Q9HCN4 374 aaPredicted RBP2.88□□□□□ -1.95
MCF2-202ENST00000370573 OR2S2Q9NQN1 319 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 CCL28Q9NRJ3 127 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 IDI2-AS1Q9NZ38 188 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 COPZ2Q9P299 210 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 UBQLN2Q9UHD9 624 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 OR2W1Q9Y3N9 320 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 ALG5Q9Y673 324 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 COX11Q9Y6N1 276 aa2.88□□□□□ -1.95
MCF2-202ENST00000370573 WNK2Q9Y3S1 2297 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms