RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 H3BTX0 84 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 C10orf111Q8N326 155 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 FAM57AQ8TBR7 257 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 FBXL7Q9UJT9 491 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 LHFPL6Q9Y693 200 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 GON4LQ3T8J9 2241 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 C11orf91Q3C1V1 193 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 COL5A1-AS1Q5SY13 56 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 NPIPB3Q92617 1050 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 OR5AC2Q9NZP5 309 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 GLRXP35754 106 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 EMP1P54849 157 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 C12orf54Q6X4T0 127 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 PLAC1Q9HBJ0 212 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 SHROOM3Q8TF72 1996 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 IGKV1-8A0A0C4DH67 115 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 OR10S1Q8NGN2 331 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 OR5P3Q8WZ94 311 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 SEMA5BQ9P283 1151 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 IGKV1D-33P01593 117 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 IGKV1-33P01594 117 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 SAMD13Q5VXD3 122 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 RFLNBQ8N5W9 214 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 LINC00470Q9BZP3 86 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 G6PC2Q9NQR9 355 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 TRGV2A0A075B6R0 118 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 ERGP11308 486 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 RPS11P62280 158 aaKnown RBP eCLIP13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 FAM206AQ9NX38 181 aa13.4□□□□□ -0.26
NUCKS1-201ENST00000367142 ZNF883P0CG24 379 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 NPFFR1Q9GZQ6 430 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 GPR132Q9UNW8 380 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 MOSP00540 346 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 NABP2Q9BQ15 211 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 ZNF703Q9H7S9 590 aaPredicted RBP13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 IGHV3-35A0A0C4DH35 117 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 TM4SF5O14894 197 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 LINC00305Q7Z4B0 112 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 PGPEP1Q9NXJ5 209 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 RGPD4Q7Z3J3 1758 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 A0A1W2PP11 408 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 CRYBB3P26998 211 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 TMEM136Q6ZRR5 245 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 K7ERU9 68 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 TDGF1P13385 188 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 LIMS1P48059 325 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 CYP2G1PQ6ZSU1 146 aa13.39□□□□□ -0.27
NUCKS1-201ENST00000367142 IGHV3-66A0A0C4DH42 116 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 FOLR2P14207 255 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 VKORC1L1Q8N0U8 176 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 IGHV3OR16-13A0A075B7E8 117 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 IGHV3-74A0A0B4J1X5 117 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 NPIPB9F8W1W9 429 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 NPIPB7O75200 414 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 PPP1R32Q7Z5V6 425 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 AQP3Q92482 292 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 ARPC1AQ92747 370 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 HLA-DRB1P01911 266 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 SMIM8Q96KF7 97 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 IGHMP01871 453 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 PAX1P15863 534 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 BSPH1Q075Z2 132 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 FAM27E3Q08E93 113 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 TTC3P53804 2025 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 RBMY1BA6NDE4 496 aaKnown RBP13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 RBMY1EA6NEQ0 496 aaKnown RBP13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 EFEMP2O95967 443 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 RBMY1DP0C7P1 496 aaKnown RBP13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 RBMY1A1P0DJD3 496 aaKnown RBP13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 RBMY1CP0DJD4 496 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 MALP21145 153 aa13.38□□□□□ -0.27
NUCKS1-201ENST00000367142 C1orf100Q5SVJ3 147 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 ABHD17AQ96GS6 310 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 BEX4Q9NWD9 120 aaPredicted RBP13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 C7orf66A4D0T2 115 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 EPOPA6NHQ4 379 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 SDF2L1Q9HCN8 221 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 METRNQ9UJH8 293 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 TMEM250H0YL14 139 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 PLP1P60201 277 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 STHQ8IWL8 128 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 NUDT10Q8NFP7 164 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 PRDM6Q9NQX0 595 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 TMEM170BQ5T4T1 132 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 Q96M66 194 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 PMCHL2Q9BQD1 86 aa13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 OSR1Q8TAX0 266 aaPredicted RBP13.37□□□□□ -0.27
NUCKS1-201ENST00000367142 PARLQ9H300 379 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 TAF1P21675 1872 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 TRBV9A0A0B4J1U6 114 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 MDKP21741 143 aaPredicted RBP13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 P2RY4P51582 365 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 SLC25A34Q6PIV7 304 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 TEX45Q8NA69 505 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 MARVELD3Q96A59 401 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 F11RQ9Y624 299 aaKnown RBP13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 TSPAN13O95857 204 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 MYOD1P15172 320 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 GATAD1Q8WUU5 269 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms