RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 GNG2P59768 71 aa10.46□□□□□ -0.73
TNFRSF1A-202ENST00000366159 CDK10Q15131 360 aa10.46□□□□□ -0.73
TNFRSF1A-202ENST00000366159 OR6Q1Q8NGQ2 317 aa10.46□□□□□ -0.73
TNFRSF1A-202ENST00000366159 SRSF12Q8WXF0 261 aaKnown RBP10.46□□□□□ -0.73
TNFRSF1A-202ENST00000366159 USMG5Q96IX5 58 aa10.46□□□□□ -0.73
TNFRSF1A-202ENST00000366159 ZNF430Q9H8G1 570 aaPredicted RBP10.46□□□□□ -0.73
TNFRSF1A-202ENST00000366159 U3KQK5 164 aa10.46□□□□□ -0.73
TNFRSF1A-202ENST00000366159 FCGR3BO75015 233 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 TMEM127O75204 238 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ZP3P21754 424 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 DEFA5Q01523 94 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 NEDD8Q15843 81 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 TNXAQ16473 311 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 IDNKQ5T6J7 187 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 KCTD9Q7L273 389 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 HOGA1Q86XE5 327 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 Q8N1Y9 231 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 GVQW1Q8N7I0 195 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 HSD17B10Q99714 261 aaKnown RBP10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ASCL2Q99929 193 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 SPATA2Q9UM82 520 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 PRELID3BQ9Y3B1 194 aa10.45□□□□□ -0.74
TNFRSF1A-202ENST00000366159 TRAV18A0A075B6X5 111 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 LOC100506127A0A0U1RQW1 187 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ANKRD34BA5PLL1 514 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 LY86O95711 162 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 TRBV12-3P01733 135 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 OR9G9P0C7N8 305 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 APELAP0DMC3 54 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ZNF45Q02386 682 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 MSMO1Q15800 293 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 SBSPONQ8IVN8 264 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 MMD2Q8IY49 270 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 PUSL1Q8N0Z8 303 aaKnown RBP10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 MFSD4AQ8N468 514 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 TTC9CQ8N5M4 171 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 BEST4Q8NFU0 473 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 OR4C12Q96R67 309 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ELOVL1Q9BW60 279 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 AUNIPQ9H7T9 357 aa10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 PEF1Q9UBV8 284 aaKnown RBP10.44□□□□□ -0.74
TNFRSF1A-202ENST00000366159 A0A1B0GW64 132 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 TRIM64CA6NLI5 447 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 TEX22C9J3V5 150 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 E7EUB6 86 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 PTHLHP12272 177 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 TGFBR1P36897 503 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 KLK9Q2XQG4 91 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ZNF66Q6ZN08 573 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 HAPLN4Q86UW8 402 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 VKORC1L1Q8N0U8 176 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 TMEM167AQ8TBQ9 72 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 SNAPC3Q92966 411 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 YIPF6Q96EC8 236 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 PHB2Q99623 299 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 AKIP1Q9NQ31 210 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 COA4Q9NYJ1 87 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 SIGLEC8Q9NYZ4 499 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ADAM30Q9UKF2 790 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 KLK9Q9UKQ9 250 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 MRPS7Q9Y2R9 242 aaKnown RBP10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 DMRT1Q9Y5R6 373 aa10.43□□□□□ -0.74
TNFRSF1A-202ENST00000366159 A8MZ25 164 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 CREBL2O60519 120 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 KBTBD11O94819 623 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 OR2A4O95047 310 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 IL6RP08887 468 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 FRMD6-AS1P0C7T7 363 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 FCGR2CP31995 323 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 MECP2P51608 486 aaKnown RBP10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 OR2B11Q5JQS5 317 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 C10orf55Q5SWW7 151 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 OR9G4Q8NGQ1 327 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 OR4S2Q8NH73 311 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ACOT12Q8WYK0 555 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 OR2A7Q96R45 310 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 GPHA2Q96T91 129 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 SPIN2AQ99865 258 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 SPIN2BQ9BPZ2 258 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 THAP7Q9BT49 309 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 DCUN1D5Q9BTE7 237 aa10.42□□□□□ -0.74
TNFRSF1A-202ENST00000366159 FAM223BA6NKX1 122 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 XRCC3O43542 346 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 PPYP01298 95 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 PRH1P02810 166 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 CSN3P07498 182 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ZNF735P0CB33 412 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 RPS19P39019 145 aaKnown RBP10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 SYNJ2BPP57105 145 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 RHOGP84095 191 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 FAM223AQ8IWN6 122 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ZBTB34Q8NCN2 500 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 VSTM2AQ8TAG5 236 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 TCTEX1D2Q8WW35 142 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 GIMAP1Q8WWP7 306 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 DIABLOQ9NR28 239 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 CCL28Q9NRJ3 127 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 TAS2R8Q9NYW2 309 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ANAPC10Q9UM13 185 aa10.41□□□□□ -0.74
TNFRSF1A-202ENST00000366159 CSMD3Q7Z407 3707 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms