RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CA6P23280 308 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 CLDN18P56856 261 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 LRRC75BQ2VPJ9 315 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 AP5S1Q9NUS5 200 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 A0A1W2PQD3 144 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 PRRT4C9JH25 899 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 GREM1O60565 184 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 FAM53BQ14153 422 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 PAXXQ9BUH6 204 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 CHODLQ9H9P2 273 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 HIGD1AQ9Y241 93 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 NEUROG3Q9Y4Z2 214 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 A6NCN8 305 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 H7C2G1 150 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 J3QT63 122 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 DLL1O00548 723 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 HYPMO75409 117 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 CENPWQ5EE01 88 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 AMMECR1LQ6DCA0 310 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 SSBP4Q9BWG4 385 aaPredicted RBP5.24□□□□□ -1.57
VPS13B-203ENST00000358544 hADV38S2A0JD32 116 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 F5H697 171 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 SPRED2Q7Z698 418 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 ODAMA1E959 279 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 CD160O95971 181 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 STPG3Q8N7X2 389 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 H1FXQ92522 213 aaKnown RBP5.24□□□□□ -1.57
VPS13B-203ENST00000358544 TNFRSF14Q92956 283 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 G6PC2Q9NQR9 355 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 CD207Q9UJ71 328 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 TRAV30A0A087WSZ9 112 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 M0R296 226 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 APOMO95445 188 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 TRA2AQ13595 282 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS13B-203ENST00000358544 EGLN1Q9GZT9 426 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 PPIAL4DF5H284 164 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 TSPOP30536 169 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 IGLV1-36A0A0B4J1U3 117 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 TMEM262E9PQX1 116 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 C8orf44Q96CB5 159 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 DECR2Q9NUI1 292 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 OR1N1Q8NGS0 311 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 SNAI2O43623 268 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 CD46P15529 392 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 HIST1H1AQ02539 215 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-203ENST00000358544 IZUMO4Q1ZYL8 232 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 TMEM177Q53S58 311 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 MYOZ3Q8TDC0 251 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 C18orf12Q96KH6 178 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 STAB1Q9NY15 2570 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 PGPEP1LA6NFU8 196 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 ZNF785A8K8V0 405 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 RPP21Q9H633 154 aaKnown RBP5.23□□□□□ -1.57
VPS13B-203ENST00000358544 ADMP35318 185 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 SRSF4Q08170 494 aaKnown RBP5.23□□□□□ -1.57
VPS13B-203ENST00000358544 TMEM230Q96A57 120 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 NGFP01138 241 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 ORM2P19652 201 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 GALNSP34059 522 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 OR13H1Q8NG92 308 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 GNRHR2Q96P88 292 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 DTX4Q9Y2E6 619 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 C19orf67A6NJJ6 358 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 H0Y8X5 98 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 OR51G1Q8NGK1 321 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 OBSL1O75147 1896 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 CXCL13O43927 109 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 CXorf67Q86X51 503 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-203ENST00000358544 ZBTB34Q8NCN2 500 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 MBD3L1Q8WWY6 194 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 ZNF32P17041 273 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 CDKN1BP46527 198 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 CYB561P49447 251 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 ZNF48Q96MX3 618 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-203ENST00000358544 TPSD1Q9BZJ3 242 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 CA7P43166 264 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 GFI1Q99684 422 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 ABHD14AQ9BUJ0 271 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 STRCP1A6NGW2 1772 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 K7ESF4 209 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 DLX1P56177 255 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 RPL11P62913 178 aaKnown RBP5.23□□□□□ -1.57
VPS13B-203ENST00000358544 UNC119Q13432 240 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 DEFB115Q30KQ5 88 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 LDLRAD1Q5T700 205 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 MGAMO43451 1857 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 HSD52Q0P140 79 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 TWIST1Q15672 202 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 COX6CP09669 75 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 MRPS11P82912 194 aaKnown RBP5.23□□□□□ -1.57
VPS13B-203ENST00000358544 TFF3Q07654 80 aa5.23□□□□□ -1.57
VPS13B-203ENST00000358544 MRPL43Q8N983 215 aaKnown RBP5.23□□□□□ -1.57
VPS13B-203ENST00000358544 A0A1W2PP11 408 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 HRKO00198 91 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 PTCRAQ6ISU1 281 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-203ENST00000358544 A0A087WV48 116 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 TNFRSF4P43489 277 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 RPL31P62899 125 aaKnown RBP5.22□□□□□ -1.57
VPS13B-203ENST00000358544 PLSCR2Q9NRY7 297 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 RPL23P62829 140 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms