RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SSX9Q7RTT3 188 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 DIRC2Q96SL1 478 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 CTDSP1Q9GZU7 261 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 SLC25A22Q9H936 323 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 IFNA10P01566 189 aa18.39■□□□□ 0.53
NKX2-1-201ENST00000354822 CD81P60033 236 aa18.39■□□□□ 0.53
NKX2-1-201ENST00000354822 RELBQ01201 579 aa18.39■□□□□ 0.53
NKX2-1-201ENST00000354822 HNF4GQ14541 408 aa18.39■□□□□ 0.53
NKX2-1-201ENST00000354822 ADTRPQ96IZ2 230 aa18.39■□□□□ 0.53
NKX2-1-201ENST00000354822 HEYLQ9NQ87 328 aaPredicted RBP18.39■□□□□ 0.53
NKX2-1-201ENST00000354822 NAT8Q9UHE5 227 aa18.39■□□□□ 0.53
NKX2-1-201ENST00000354822 ZFHX4Q86UP3 3567 aa18.39■□□□□ 0.53
NKX2-1-201ENST00000354822 S100A9P06702 114 aaKnown RBP18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 BMP5P22003 454 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 THBS3P49746 956 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 ERVFRD-1P60508 538 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 RAB24Q969Q5 203 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 DOCK11Q5JSL3 2073 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 MUC6Q6W4X9 2439 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 IRF2P14316 349 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 VDAC2P45880 294 aaPredicted RBP18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 RND2P52198 227 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 TMPRSS3P57727 454 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 RPS16P62249 146 aaKnown RBP18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 FOXC1Q12948 553 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 CT45A1Q5HYN5 189 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 FAM201AQ5SY85 155 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 TMEM108Q6UXF1 575 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 IQCF2Q8IXL9 164 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 CT45A3Q8NHU0 189 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 COL25A1Q9BXS0 654 aaPredicted RBP18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 TMEM140Q9NV12 185 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 ELOVL5Q9NYP7 299 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 SSUH2Q9Y2M2 353 aa18.38■□□□□ 0.53
NKX2-1-201ENST00000354822 PCP4L1A6NKN8 68 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 ATXN7O15265 892 aaPredicted RBP18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 ZNF343Q6P1L6 599 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 LINC00574Q9H8X3 128 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 URGCP-MRPS24S4R325 110 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 TRGV8A0A0C4DH27 118 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 ZNF729A6NN14 1252 aaPredicted RBP18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 PRRG2O14669 202 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 SLC31A2O15432 143 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 TGOLN2O43493 480 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 CXCL1P09341 107 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 SMIM6P0DI80 62 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 TMEM241Q24JQ0 296 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 TMEM249Q2WGJ8 235 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 CYP2G1PQ6ZSU1 146 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 OR13D1Q8NGV5 346 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 CORO2AQ92828 525 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 SMIM7Q9BQ49 75 aa18.37■□□□□ 0.53
NKX2-1-201ENST00000354822 IGHV3-7P01780 117 aa18.36■□□□□ 0.53
NKX2-1-201ENST00000354822 TLE1Q04724 770 aa18.36■□□□□ 0.53
NKX2-1-201ENST00000354822 ZNF674Q2M3X9 581 aa18.36■□□□□ 0.53
NKX2-1-201ENST00000354822 ZNF788Q6ZQV5 615 aa18.36■□□□□ 0.53
NKX2-1-201ENST00000354822 GAFA1Q96PS6 74 aa18.36■□□□□ 0.53
NKX2-1-201ENST00000354822 CADP27708 2225 aa18.36■□□□□ 0.53
NKX2-1-201ENST00000354822 SEC14L6B5MCN3 397 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 KBTBD11O94819 623 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 CDC34P49427 236 aaPredicted RBP18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 KIAA0141Q14154 515 aaPredicted RBP18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 TEX36Q5VZQ5 186 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 C22orf34Q6ZV56 151 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 SSX8Q7RTT4 187 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 VKORC1L1Q8N0U8 176 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 RAB1CQ92928 201 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 TMPRSS5Q9H3S3 457 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 IDI2-AS1Q9NZ38 188 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 SMCO3A2RU48 225 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 C16orf97H3BN30 126 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 HMGB3O15347 200 aaKnown RBP18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 GFRA3O60609 400 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 OPN1MWP04001 364 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 OPN1MW2P0DN77 364 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 OPN1MW3P0DN78 364 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 SELLP14151 372 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 S100A12P80511 92 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 MRPS11P82912 194 aaKnown RBP18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 C1orf87Q8N0U7 546 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 ABHD17AQ96GS6 310 aa18.35■□□□□ 0.53
NKX2-1-201ENST00000354822 SAA2-SAA4A0A096LPE2 208 aa18.34■□□□□ 0.53
NKX2-1-201ENST00000354822 TGIF2-C20orf24A0A0A6YYL0 155 aa18.34■□□□□ 0.53
NKX2-1-201ENST00000354822 SAA2P0DJI9 122 aaPredicted RBP18.34■□□□□ 0.53
NKX2-1-201ENST00000354822 TNFRSF1AP19438 455 aa18.34■□□□□ 0.53
NKX2-1-201ENST00000354822 DOLPP1Q86YN1 238 aa18.34■□□□□ 0.53
NKX2-1-201ENST00000354822 Q8N7P7 452 aa18.34■□□□□ 0.53
NKX2-1-201ENST00000354822 TCF19Q9Y242 345 aa18.34■□□□□ 0.53
NKX2-1-201ENST00000354822 GVINP1Q7Z2Y8 2422 aa18.34■□□□□ 0.53
NKX2-1-201ENST00000354822 C15orf61A6NNL5 157 aa18.34■□□□□ 0.53
NKX2-1-201ENST00000354822 OPRK1P41145 380 aa18.34■□□□□ 0.53
NKX2-1-201ENST00000354822 DEFB108BQ8NET1 73 aa18.34■□□□□ 0.53
NKX2-1-201ENST00000354822 CCL13Q99616 98 aa18.34■□□□□ 0.53
NKX2-1-201ENST00000354822 SPENQ96T58 3664 aaKnown RBP18.33■□□□□ 0.53
NKX2-1-201ENST00000354822 HCFC1P51610 2035 aa18.33■□□□□ 0.53
NKX2-1-201ENST00000354822 HRASP01112 189 aa18.33■□□□□ 0.52
NKX2-1-201ENST00000354822 C1orf229Q6ZS94 237 aaPredicted RBP18.33■□□□□ 0.52
NKX2-1-201ENST00000354822 ZNF439Q8NDP4 499 aa18.33■□□□□ 0.52
NKX2-1-201ENST00000354822 FAM210BQ96KR6 192 aa18.33■□□□□ 0.52
NKX2-1-201ENST00000354822 RHOVQ96L33 236 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms