RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 SNAPC3Q92966 411 aa13.69□□□□□ -0.22
CKLF-202ENST00000345436 ELF5Q9UKW6 265 aaPredicted RBP13.69□□□□□ -0.22
CKLF-202ENST00000345436 COL7A1Q02388 2944 aa13.69□□□□□ -0.22
CKLF-202ENST00000345436 TRAV18A0A075B6X5 111 aa13.68□□□□□ -0.22
CKLF-202ENST00000345436 FAM223BA6NKX1 122 aa13.68□□□□□ -0.22
CKLF-202ENST00000345436 LINC00473A8K010 186 aa13.68□□□□□ -0.22
CKLF-202ENST00000345436 H0Y980 276 aa13.68□□□□□ -0.22
CKLF-202ENST00000345436 HRASP01112 189 aa13.68□□□□□ -0.22
CKLF-202ENST00000345436 KIR2DS2P43631 304 aa13.68□□□□□ -0.22
CKLF-202ENST00000345436 CBX5P45973 191 aa13.68□□□□□ -0.22
CKLF-202ENST00000345436 KCTD21Q4G0X4 260 aa13.68□□□□□ -0.22
CKLF-202ENST00000345436 ZNF66Q6ZN08 573 aa13.68□□□□□ -0.22
CKLF-202ENST00000345436 FAM223AQ8IWN6 122 aa13.68□□□□□ -0.22
CKLF-202ENST00000345436 TCTEX1D2Q8WW35 142 aa13.68□□□□□ -0.22
CKLF-202ENST00000345436 SRSF12Q8WXF0 261 aaKnown RBP13.68□□□□□ -0.22
CKLF-202ENST00000345436 DPPA5A6NC42 116 aa13.67□□□□□ -0.22
CKLF-202ENST00000345436 ATP5G2Q06055 141 aa13.67□□□□□ -0.22
CKLF-202ENST00000345436 KLF5Q13887 457 aaPredicted RBP13.67□□□□□ -0.22
CKLF-202ENST00000345436 NEDD8Q15843 81 aa13.67□□□□□ -0.22
CKLF-202ENST00000345436 RPEL1Q2QD12 228 aa13.67□□□□□ -0.22
CKLF-202ENST00000345436 ZNF343Q6P1L6 599 aa13.67□□□□□ -0.22
CKLF-202ENST00000345436 OVCH2Q7RTZ1 564 aa13.67□□□□□ -0.22
CKLF-202ENST00000345436 ZBTB34Q8NCN2 500 aa13.67□□□□□ -0.22
CKLF-202ENST00000345436 BEST4Q8NFU0 473 aa13.67□□□□□ -0.22
CKLF-202ENST00000345436 BORCS5Q969J3 196 aa13.67□□□□□ -0.22
CKLF-202ENST00000345436 C5orf30Q96GV9 206 aa13.67□□□□□ -0.22
CKLF-202ENST00000345436 ASCL2Q99929 193 aa13.67□□□□□ -0.22
CKLF-202ENST00000345436 ZMAT4Q9H898 229 aa13.67□□□□□ -0.22
CKLF-202ENST00000345436 OR2A4O95047 310 aa13.66□□□□□ -0.22
CKLF-202ENST00000345436 DHFRP00374 187 aa13.66□□□□□ -0.22
CKLF-202ENST00000345436 MAS1LP35410 378 aa13.66□□□□□ -0.22
CKLF-202ENST00000345436 SSBP2P81877 361 aaPredicted RBP13.66□□□□□ -0.22
CKLF-202ENST00000345436 MSMO1Q15800 293 aa13.66□□□□□ -0.22
CKLF-202ENST00000345436 IDO2Q6ZQW0 420 aa13.66□□□□□ -0.22
CKLF-202ENST00000345436 SGPP2Q8IWX5 399 aa13.66□□□□□ -0.22
CKLF-202ENST00000345436 ADAD2Q8NCV1 583 aaKnown RBP13.66□□□□□ -0.22
CKLF-202ENST00000345436 OR9G4Q8NGQ1 327 aa13.66□□□□□ -0.22
CKLF-202ENST00000345436 OR2A7Q96R45 310 aa13.66□□□□□ -0.22
CKLF-202ENST00000345436 ZNF430Q9H8G1 570 aaPredicted RBP13.66□□□□□ -0.22
CKLF-202ENST00000345436 PEMTQ9UBM1 199 aa13.66□□□□□ -0.22
CKLF-202ENST00000345436 SPATA2Q9UM82 520 aa13.66□□□□□ -0.22
CKLF-202ENST00000345436 SORL1Q92673 2214 aa13.66□□□□□ -0.22
CKLF-202ENST00000345436 AIREO43918 545 aa13.65□□□□□ -0.22
CKLF-202ENST00000345436 SAA1P0DJI8 122 aaPredicted RBP13.65□□□□□ -0.22
CKLF-202ENST00000345436 HOGA1Q86XE5 327 aa13.65□□□□□ -0.22
CKLF-202ENST00000345436 MFSD4AQ8N468 514 aa13.65□□□□□ -0.22
CKLF-202ENST00000345436 NECAP1Q8NC96 275 aa13.65□□□□□ -0.22
CKLF-202ENST00000345436 S100A16Q96FQ6 103 aaKnown RBP13.65□□□□□ -0.22
CKLF-202ENST00000345436 SSX5O60225 188 aa13.64□□□□□ -0.23
CKLF-202ENST00000345436 IGLV1-51P01701 117 aa13.64□□□□□ -0.23
CKLF-202ENST00000345436 APELAP0DMC3 54 aa13.64□□□□□ -0.23
CKLF-202ENST00000345436 FCGR2CP31995 323 aa13.64□□□□□ -0.23
CKLF-202ENST00000345436 SYNJ2BPP57105 145 aa13.64□□□□□ -0.23
CKLF-202ENST00000345436 RHOGP84095 191 aa13.64□□□□□ -0.23
CKLF-202ENST00000345436 CATR1Q13166 79 aa13.64□□□□□ -0.23
CKLF-202ENST00000345436 OR2B11Q5JQS5 317 aa13.64□□□□□ -0.23
CKLF-202ENST00000345436 TTC9CQ8N5M4 171 aa13.64□□□□□ -0.23
CKLF-202ENST00000345436 ZNF257Q9Y2Q1 563 aa13.64□□□□□ -0.23
CKLF-202ENST00000345436 CLEC2LP0C7M8 214 aa13.63□□□□□ -0.23
CKLF-202ENST00000345436 DYRK1AQ13627 763 aa13.63□□□□□ -0.23
CKLF-202ENST00000345436 LCN12Q6JVE5 192 aa13.63□□□□□ -0.23
CKLF-202ENST00000345436 OR4A5Q8NH83 315 aa13.63□□□□□ -0.23
CKLF-202ENST00000345436 CD300LFQ8TDQ1 290 aa13.63□□□□□ -0.23
CKLF-202ENST00000345436 SECTM1Q8WVN6 248 aa13.63□□□□□ -0.23
CKLF-202ENST00000345436 AUNIPQ9H7T9 357 aa13.63□□□□□ -0.23
CKLF-202ENST00000345436 IFT46Q9NQC8 304 aa13.63□□□□□ -0.23
CKLF-202ENST00000345436 TAS2R8Q9NYW2 309 aa13.63□□□□□ -0.23
CKLF-202ENST00000345436 SIGLEC8Q9NYZ4 499 aa13.63□□□□□ -0.23
CKLF-202ENST00000345436 TENM3Q9P273 2699 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 A0A087WXM4 84 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 IGKV1D-13A0A0B4J2D9 117 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 C3orf84H3BNL1 204 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 KBTBD11O94819 623 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 FRMD6-AS1P0C7T7 363 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 IGKV1-13P0DP09 117 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 RPL27AP46776 148 aaKnown RBP13.62□□□□□ -0.23
CKLF-202ENST00000345436 RPL30P62888 115 aaKnown RBP13.62□□□□□ -0.23
CKLF-202ENST00000345436 MRGPRG-AS1Q2M3A8 158 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 GTSCR1Q86UQ5 136 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 OR13F1Q8NGS4 319 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 OR5H6Q8NGV6 325 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 TMEM167AQ8TBQ9 72 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 KCTD12Q96CX2 325 aaKnown RBP13.62□□□□□ -0.23
CKLF-202ENST00000345436 SLC5A7Q9GZV3 580 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 AKIP1Q9NQ31 210 aa13.62□□□□□ -0.23
CKLF-202ENST00000345436 TRBV9A0A0B4J1U6 114 aa13.61□□□□□ -0.23
CKLF-202ENST00000345436 XRCC3O43542 346 aa13.61□□□□□ -0.23
CKLF-202ENST00000345436 PPYP01298 95 aa13.61□□□□□ -0.23
CKLF-202ENST00000345436 HIST1H1BP16401 226 aaKnown RBP13.61□□□□□ -0.23
CKLF-202ENST00000345436 EXOSC2Q13868 293 aaKnown RBP13.61□□□□□ -0.23
CKLF-202ENST00000345436 Q8N402 240 aa13.61□□□□□ -0.23
CKLF-202ENST00000345436 OR5AP2Q8NGF4 316 aa13.61□□□□□ -0.23
CKLF-202ENST00000345436 OR2K2Q8NGT1 345 aa13.61□□□□□ -0.23
CKLF-202ENST00000345436 GIMAP1Q8WWP7 306 aa13.61□□□□□ -0.23
CKLF-202ENST00000345436 SLC25A38Q96DW6 304 aa13.61□□□□□ -0.23
CKLF-202ENST00000345436 FYTTD1Q96QD9 318 aaKnown RBP13.61□□□□□ -0.23
CKLF-202ENST00000345436 RNF167Q9H6Y7 350 aa13.61□□□□□ -0.23
CKLF-202ENST00000345436 NPIPB5A8MRT5 1133 aa13.6□□□□□ -0.23
CKLF-202ENST00000345436 CYB5BO43169 146 aa13.6□□□□□ -0.23
CKLF-202ENST00000345436 RBFOX2O43251 390 aaKnown RBP eCLIP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms