RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 GNG12Q9UBI6 72 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 FABP4P15090 132 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 GZMHP20718 246 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 BMP5P22003 454 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 LOXL3P58215 753 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 FAM57AQ8TBR7 257 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 SFXN3Q9BWM7 321 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 PRDM13Q9H4Q3 707 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 ADGRG4Q8IZF6 3080 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 PHOX2AO14813 284 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 IFNA1P01562 189 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 DUTP33316 252 aaKnown RBP16.66■□□□□ 0.26
SPG7-202ENST00000341316 GPR12P47775 334 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 EDDM3BP56851 147 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 WDR25Q64LD2 544 aaPredicted RBP16.66■□□□□ 0.26
SPG7-202ENST00000341316 DUX4L9Q6RFH8 374 aaPredicted RBP16.66■□□□□ 0.26
SPG7-202ENST00000341316 TCTEX1D1Q8N7M0 179 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 DTD1Q8TEA8 209 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 PINX1Q96BK5 328 aaKnown RBP16.66■□□□□ 0.26
SPG7-202ENST00000341316 PARD6GQ9BYG4 376 aaPredicted RBP16.66■□□□□ 0.26
SPG7-202ENST00000341316 MARCH11A6NNE9 402 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 A8MXE2 369 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 IGKV1D-33P01593 117 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 IGKV1-33P01594 117 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 OPN1MWP04001 364 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 OPN1MW2P0DN77 364 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 OPN1MW3P0DN78 364 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 C3orf36Q3SXR2 165 aa16.66■□□□□ 0.26
SPG7-202ENST00000341316 TRBV24-1A0A075B6N3 115 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 TGOLN2O43493 480 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 HIST1H1BP16401 226 aaKnown RBP16.65■□□□□ 0.26
SPG7-202ENST00000341316 TLE1Q04724 770 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 RPL39P5Q59GN2 51 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 LHX4Q969G2 390 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 JPT1Q9UK76 154 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 PCNX1Q96RV3 2341 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 OR9G9P0C7N8 305 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 CCKARP32238 428 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 ADIRFQ15847 76 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 C1orf229Q6ZS94 237 aaPredicted RBP16.65■□□□□ 0.26
SPG7-202ENST00000341316 RPP25LQ8N5L8 163 aaKnown RBP16.65■□□□□ 0.26
SPG7-202ENST00000341316 Q8TCH9 128 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 FAM234AQ9H0X4 552 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 SLC39A9Q9NUM3 307 aa16.65■□□□□ 0.26
SPG7-202ENST00000341316 FCGR3BO75015 233 aa16.64■□□□□ 0.25
SPG7-202ENST00000341316 RBMXL2O75526 392 aaKnown RBP16.64■□□□□ 0.25
SPG7-202ENST00000341316 CD81P60033 236 aa16.64■□□□□ 0.25
SPG7-202ENST00000341316 LEAP2Q969E1 77 aa16.64■□□□□ 0.25
SPG7-202ENST00000341316 R3HDM4Q96D70 268 aa16.64■□□□□ 0.25
SPG7-202ENST00000341316 SMIM7Q9BQ49 75 aa16.64■□□□□ 0.25
SPG7-202ENST00000341316 QTRT1Q9BXR0 403 aaKnown RBP16.64■□□□□ 0.25
SPG7-202ENST00000341316 CTDSP1Q9GZU7 261 aa16.64■□□□□ 0.25
SPG7-202ENST00000341316 GFOD1Q9NXC2 390 aa16.64■□□□□ 0.25
SPG7-202ENST00000341316 ROS1P08922 2347 aa16.64■□□□□ 0.25
SPG7-202ENST00000341316 HMGB3O15347 200 aaKnown RBP16.63■□□□□ 0.25
SPG7-202ENST00000341316 SLC31A2O15432 143 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 YPEL1O60688 119 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 PPP1R35Q8TAP8 253 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 YPEL2Q96QA6 119 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 IFI27L2Q9H2X8 130 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 GCM1Q9NP62 436 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 NAT8Q9UHE5 227 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 F2RL2O00254 374 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 NDUFS6O75380 124 aaKnown RBP16.63■□□□□ 0.25
SPG7-202ENST00000341316 LY86O95711 162 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 IGHV1-46P01743 117 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 CGB3P0DN86 165 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 CGB7P0DN87 165 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 NBL1P41271 181 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 KRTCAP3Q53RY4 240 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 ACSM6Q6P461 480 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 C16orf82Q7Z2V1 217 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 ZGRF1Q86YA3 2104 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 TGIF2LYQ8IUE0 185 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 LAMP3Q9UQV4 416 aa16.63■□□□□ 0.25
SPG7-202ENST00000341316 M0R1X1 148 aa16.62■□□□□ 0.25
SPG7-202ENST00000341316 CD40P25942 277 aa16.62■□□□□ 0.25
SPG7-202ENST00000341316 GATA4P43694 442 aa16.62■□□□□ 0.25
SPG7-202ENST00000341316 DEFA6Q01524 100 aa16.62■□□□□ 0.25
SPG7-202ENST00000341316 GAMTQ14353 236 aa16.62■□□□□ 0.25
SPG7-202ENST00000341316 C17orf58Q2M2W7 97 aa16.62■□□□□ 0.25
SPG7-202ENST00000341316 VKORC1L1Q8N0U8 176 aa16.62■□□□□ 0.25
SPG7-202ENST00000341316 CALYQ9NYX4 217 aa16.62■□□□□ 0.25
SPG7-202ENST00000341316 DOCK11Q5JSL3 2073 aa16.62■□□□□ 0.25
SPG7-202ENST00000341316 GPX4P36969 197 aaPredicted RBP16.62■□□□□ 0.25
SPG7-202ENST00000341316 MEF2BQ02080 365 aaPredicted RBP16.62■□□□□ 0.25
SPG7-202ENST00000341316 SSX9Q7RTT3 188 aa16.62■□□□□ 0.25
SPG7-202ENST00000341316 CENPVQ7Z7K6 275 aaPredicted RBP16.62■□□□□ 0.25
SPG7-202ENST00000341316 FAM222BQ8WU58 562 aa16.62■□□□□ 0.25
SPG7-202ENST00000341316 SLC25A22Q9H936 323 aa16.62■□□□□ 0.25
SPG7-202ENST00000341316 TFF3Q07654 80 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 CYP2G1PQ6ZSU1 146 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 DOLPP1Q86YN1 238 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 NECAP1Q8NC96 275 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 OR10A7Q8NGE5 316 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 OR4X1Q8NH49 305 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 RPUSD4Q96CM3 377 aaKnown RBP16.61■□□□□ 0.25
SPG7-202ENST00000341316 ABHD17AQ96GS6 310 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 RHOVQ96L33 236 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 PACRGQ96M98 296 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms