RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 C20orf24Q9BUV8 137 aa16.66■□□□□ 0.26
RIPPLY3-201ENST00000329553 PRB1P04280 392 aa16.66■□□□□ 0.26
RIPPLY3-201ENST00000329553 DUTP33316 252 aaKnown RBP16.66■□□□□ 0.26
RIPPLY3-201ENST00000329553 DYNLT3P51808 116 aa16.66■□□□□ 0.26
RIPPLY3-201ENST00000329553 CCL20P78556 96 aa16.66■□□□□ 0.26
RIPPLY3-201ENST00000329553 ZNF439Q8NDP4 499 aa16.66■□□□□ 0.26
RIPPLY3-201ENST00000329553 RARRES2Q99969 163 aa16.66■□□□□ 0.26
RIPPLY3-201ENST00000329553 RPUSD1Q9UJJ7 312 aaKnown RBP16.66■□□□□ 0.26
RIPPLY3-201ENST00000329553 A0A1B0GV50 99 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 GPR37O15354 613 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 CHST1O43916 411 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 CST7O76096 145 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 IGFBP2P18065 325 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 RAB7AP51149 207 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 PAX9P55771 341 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 DTX2Q86UW9 622 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 ISOC2Q96AB3 205 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 GNPNAT1Q96EK6 184 aaPredicted RBP16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 ZNF714Q96N38 554 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 GAL3ST2Q9H3Q3 398 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 CACNG5Q9UF02 275 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 LAMP3Q9UQV4 416 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 DCHS2Q6V1P9 2916 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 BTBD17A6NE02 478 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 M0R1X1 148 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 S1PR2O95136 353 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 IGHV2-70P01814 119 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 OR13C7P0DN81 318 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 DAOP14920 347 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 TCTEX1D1Q8N7M0 179 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 CD300LFQ8TDQ1 290 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 GAB2Q9UQC2 676 aa16.65■□□□□ 0.26
RIPPLY3-201ENST00000329553 RBFOX3A6NFN3 312 aa16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 KIAA1324LA8MWY0 1029 aaPredicted RBP16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 FSTL3O95633 263 aa16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 KRASP01116 189 aa16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 G6PCP35575 357 aa16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 GNG10P50151 68 aa16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 SULT1A1P50225 295 aa16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 HIPK2Q9H2X6 1198 aa16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 A0A1W2PPH5 198 aa16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 C5orf52A6NGY3 159 aa16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 MEOX2P50222 304 aa16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 SNRPEP62304 92 aaKnown RBP16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 TMEM30BQ3MIR4 351 aa16.64■□□□□ 0.25
RIPPLY3-201ENST00000329553 SOHLH1Q5JUK2 328 aa16.63■□□□□ 0.25
RIPPLY3-201ENST00000329553 HEPN1Q6WQI6 88 aa16.63■□□□□ 0.25
RIPPLY3-201ENST00000329553 TMEM217Q8N7C4 229 aa16.63■□□□□ 0.25
RIPPLY3-201ENST00000329553 OR10A7Q8NGE5 316 aa16.63■□□□□ 0.25
RIPPLY3-201ENST00000329553 KIAA1456Q9P272 454 aa16.63■□□□□ 0.25
RIPPLY3-201ENST00000329553 MMP24Q9Y5R2 645 aa16.63■□□□□ 0.25
RIPPLY3-201ENST00000329553 LYG1Q8N1E2 194 aa16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 NEU4Q8WWR8 484 aaPredicted RBP16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 ATP5SQ99766 215 aa16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 ZNF251Q9BRH9 671 aa16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 DOCK11Q5JSL3 2073 aa16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 SAA2-SAA4A0A096LPE2 208 aa16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 WRBO00258 174 aa16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 RAB29O14966 203 aa16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 EIF3GO75821 320 aaKnown RBP eCLIP16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 SAA2P0DJI9 122 aaPredicted RBP16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 RAB5AP20339 215 aa16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 MAS1LP35410 378 aa16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 ZNF841Q6ZN19 808 aa16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 ZNF295-AS1Q8N0V1 137 aa16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 ZNRD1Q9P1U0 126 aa16.62■□□□□ 0.25
RIPPLY3-201ENST00000329553 UBE2CO00762 179 aa16.61■□□□□ 0.25
RIPPLY3-201ENST00000329553 FCGR3BO75015 233 aa16.61■□□□□ 0.25
RIPPLY3-201ENST00000329553 P0C879 139 aa16.61■□□□□ 0.25
RIPPLY3-201ENST00000329553 MRPS11P82912 194 aaKnown RBP16.61■□□□□ 0.25
RIPPLY3-201ENST00000329553 SLC25A48Q6ZT89 311 aaKnown RBP16.61■□□□□ 0.25
RIPPLY3-201ENST00000329553 MALSU1Q96EH3 234 aa16.61■□□□□ 0.25
RIPPLY3-201ENST00000329553 UBTD1Q9HAC8 227 aa16.61■□□□□ 0.25
RIPPLY3-201ENST00000329553 RUNX1Q01196 453 aa16.61■□□□□ 0.25
RIPPLY3-201ENST00000329553 DPPA3Q6W0C5 159 aa16.61■□□□□ 0.25
RIPPLY3-201ENST00000329553 A0A1W2PPE2 198 aa16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 TXNL1O43396 289 aa16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 ARG1P05089 322 aa16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 TAS2R30P59541 319 aa16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 FAM24BQ8N5W8 94 aa16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 UNKLQ9H9P5 680 aaKnown RBP16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 A6NNC1 897 aa16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 SRP19P09132 144 aaKnown RBP16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 DLX6P56179 175 aa16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 TMEM155Q4W5P6 130 aa16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 DDB2Q92466 427 aa16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 YPEL4Q96NS1 127 aa16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 PUS1Q9Y606 427 aaKnown RBP eCLIP16.6■□□□□ 0.25
RIPPLY3-201ENST00000329553 hCG_1809904A0A1W2PP81 198 aa16.59■□□□□ 0.25
RIPPLY3-201ENST00000329553 A0A1W2PR64 198 aa16.59■□□□□ 0.25
RIPPLY3-201ENST00000329553 A0A1W2PRV1 198 aa16.59■□□□□ 0.25
RIPPLY3-201ENST00000329553 DFFBO76075 338 aa16.59■□□□□ 0.25
RIPPLY3-201ENST00000329553 CDKN1AP38936 164 aa16.59■□□□□ 0.25
RIPPLY3-201ENST00000329553 AKR1C8PQ5T2L2 129 aa16.59■□□□□ 0.25
RIPPLY3-201ENST00000329553 STX12Q86Y82 276 aa16.59■□□□□ 0.25
RIPPLY3-201ENST00000329553 RAB40CQ96S21 281 aa16.59■□□□□ 0.25
RIPPLY3-201ENST00000329553 MALRD1Q5VYJ5 2156 aa16.59■□□□□ 0.25
RIPPLY3-201ENST00000329553 PPIHO43447 177 aaKnown RBP16.58■□□□□ 0.25
RIPPLY3-201ENST00000329553 S1PR3Q99500 378 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms