RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 VWA1Q6PCB0 445 aa16.54■□□□□ 0.24
CRLF3-201ENST00000324238 MDS2Q8NDY4 140 aa16.54■□□□□ 0.24
CRLF3-201ENST00000324238 IGHV3OR15-7A0A075B7D8 119 aa16.54■□□□□ 0.24
CRLF3-201ENST00000324238 C21orf140B9A014 251 aa16.54■□□□□ 0.24
CRLF3-201ENST00000324238 RRHO14718 337 aa16.54■□□□□ 0.24
CRLF3-201ENST00000324238 PROP1O75360 226 aa16.54■□□□□ 0.24
CRLF3-201ENST00000324238 P0C879 139 aa16.54■□□□□ 0.24
CRLF3-201ENST00000324238 RPL39P5Q59GN2 51 aa16.54■□□□□ 0.24
CRLF3-201ENST00000324238 ATG101Q9BSB4 218 aa16.54■□□□□ 0.24
CRLF3-201ENST00000324238 C15orf62A8K5M9 175 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 CD82P27701 267 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 FOXF2Q12947 444 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 CATR1Q13166 79 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 DBX2Q6ZNG2 339 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 AKAP13Q12802 2813 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 OTOGLQ3ZCN5 2332 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 MIC13Q5XKP0 118 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 Q8IYB0 196 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 KMT2EQ8IZD2 1858 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 GRIFINA4D1Z8 144 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 TMEM250H0YL14 139 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 AQP7O14520 342 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 IL3RAP26951 378 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 FER1L6-AS2Q96M78 137 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 PYGO2Q9BRQ0 406 aa16.53■□□□□ 0.24
CRLF3-201ENST00000324238 PKDREJQ9NTG1 2253 aa16.52■□□□□ 0.24
CRLF3-201ENST00000324238 FAM90A26D6RGX4 464 aa16.52■□□□□ 0.24
CRLF3-201ENST00000324238 RBFOX2O43251 390 aaKnown RBP eCLIP16.52■□□□□ 0.24
CRLF3-201ENST00000324238 TIMM8AO60220 97 aaPredicted RBP16.52■□□□□ 0.24
CRLF3-201ENST00000324238 MYOD1P15172 320 aa16.52■□□□□ 0.24
CRLF3-201ENST00000324238 MRPL49Q13405 166 aaKnown RBP16.52■□□□□ 0.24
CRLF3-201ENST00000324238 R3HDM4Q96D70 268 aa16.52■□□□□ 0.24
CRLF3-201ENST00000324238 AGMATQ9BSE5 352 aa16.52■□□□□ 0.24
CRLF3-201ENST00000324238 OOEPA6NGQ2 149 aa16.52■□□□□ 0.23
CRLF3-201ENST00000324238 SSX2Q16385 188 aa16.52■□□□□ 0.23
CRLF3-201ENST00000324238 IMMP2LQ96T52 175 aa16.52■□□□□ 0.23
CRLF3-201ENST00000324238 TRBV20OR9-2A0A075B6H5 130 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 A0A1W2PPV4 95 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 CLDN14O95500 239 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 FRMD6-AS1P0C7T7 363 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 WDR82Q6UXN9 313 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 LINC01551Q86U37 167 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 Q8N7P7 452 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 FDCSPQ8NFU4 85 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 HEYLQ9NQ87 328 aaPredicted RBP16.51■□□□□ 0.23
CRLF3-201ENST00000324238 GNG12Q9UBI6 72 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 TIMM9Q9Y5J7 89 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 M0R296 226 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 CD1BP29016 333 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 EIF4EBP1Q13541 118 aaPredicted RBP16.51■□□□□ 0.23
CRLF3-201ENST00000324238 ACP7Q6ZNF0 438 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 OR6C3Q9NZP0 311 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 DUSP13Q9UII6 198 aa16.51■□□□□ 0.23
CRLF3-201ENST00000324238 SPRNQ5BIV9 151 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 FAM201AQ5SY85 155 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 Q8TCH9 128 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 SCGB1D1O95968 90 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 ARL14EPLP0DKL9 152 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 PRAMEF5Q5TYX0 476 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 SPATA31B1PQ5VZV4 182 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 CENPVQ7Z7K6 275 aaPredicted RBP16.5■□□□□ 0.23
CRLF3-201ENST00000324238 CD177Q8N6Q3 437 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 TMEM170AQ8WVE7 144 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 FAM122AQ96E09 287 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 HINT2Q9BX68 163 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 SPAARA0A1B0GVQ0 90 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 M0R1X1 148 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 SELLP14151 372 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 GCH1P30793 250 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 VHLLQ6RSH7 139 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 SGMS2Q8NHU3 365 aa16.5■□□□□ 0.23
CRLF3-201ENST00000324238 TET2Q6N021 2002 aaPredicted RBP16.49■□□□□ 0.23
CRLF3-201ENST00000324238 SCO2A0A1W2PP80 73 aa16.49■□□□□ 0.23
CRLF3-201ENST00000324238 A8MWP6 167 aa16.49■□□□□ 0.23
CRLF3-201ENST00000324238 ZNRF1Q8ND25 227 aa16.49■□□□□ 0.23
CRLF3-201ENST00000324238 MANBALQ9NQG1 85 aa16.49■□□□□ 0.23
CRLF3-201ENST00000324238 TRAPPC1Q9Y5R8 145 aa16.49■□□□□ 0.23
CRLF3-201ENST00000324238 SLC17A3O00476 420 aa16.49■□□□□ 0.23
CRLF3-201ENST00000324238 DVL1O14640 695 aa16.49■□□□□ 0.23
CRLF3-201ENST00000324238 WNT2P09544 360 aa16.49■□□□□ 0.23
CRLF3-201ENST00000324238 ACTL10Q5JWF8 245 aa16.49■□□□□ 0.23
CRLF3-201ENST00000324238 ASPHD1Q5U4P2 390 aa16.49■□□□□ 0.23
CRLF3-201ENST00000324238 ACACAQ13085 2346 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 PIGBOS1A0A0B4J2F0 54 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 IQCF6A8MYZ5 107 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 EREGO14944 169 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 TGOLN2O43493 480 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 SPINK4O60575 86 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 WT1P19544 449 aaPredicted RBP16.48■□□□□ 0.23
CRLF3-201ENST00000324238 GPR12P47775 334 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 ACOT6Q3I5F7 207 aaPredicted RBP16.48■□□□□ 0.23
CRLF3-201ENST00000324238 C1orf229Q6ZS94 237 aaPredicted RBP16.48■□□□□ 0.23
CRLF3-201ENST00000324238 LRRC29Q8WV35 223 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 MS4A5Q9H3V2 200 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 RAB29O14966 203 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 MBP02144 154 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 ZNF134P52741 427 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 ATP6V1FQ16864 119 aa16.48■□□□□ 0.23
CRLF3-201ENST00000324238 ACSF3Q4G176 576 aaPredicted RBP16.48■□□□□ 0.23
CRLF3-201ENST00000324238 TGIF2LXQ8IUE1 241 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms