RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 FSTP19883 344 aa9.25□□□□□ -0.93
PKNOX1-201ENST00000291547 NIT1Q86X76 327 aa9.25□□□□□ -0.93
PKNOX1-201ENST00000291547 FGFRL1Q8N441 504 aa9.25□□□□□ -0.93
PKNOX1-201ENST00000291547 SPSB4Q96A44 273 aa9.25□□□□□ -0.93
PKNOX1-201ENST00000291547 ZNF430Q9H8G1 570 aaPredicted RBP9.25□□□□□ -0.93
PKNOX1-201ENST00000291547 EP300Q09472 2414 aaPredicted RBP9.25□□□□□ -0.93
PKNOX1-201ENST00000291547 C1QTNF9BB2RNN3 333 aa9.25□□□□□ -0.93
PKNOX1-201ENST00000291547 PPP1R17O96001 155 aa9.25□□□□□ -0.93
PKNOX1-201ENST00000291547 C8orf88P0DMB2 117 aa9.25□□□□□ -0.93
PKNOX1-201ENST00000291547 ARF6P62330 175 aa9.25□□□□□ -0.93
PKNOX1-201ENST00000291547 TMEM92Q6UXU6 159 aa9.25□□□□□ -0.93
PKNOX1-201ENST00000291547 ARL14EPLP0DKL9 152 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 CBLN1P23435 193 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 GGTLC2Q14390 218 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 INO80CQ6PI98 192 aaPredicted RBP9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 MDP1Q86V88 176 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 ZNF418Q8TF45 676 aaPredicted RBP9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 COPS9Q8WXC6 57 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 SMIM8Q96KF7 97 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 SH3BGRL3Q9H299 93 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 UBTD1Q9HAC8 227 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 MRPS16Q9Y3D3 137 aaKnown RBP9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 DLX6P56179 175 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 RPL8P62917 257 aaKnown RBP9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 DDB2Q92466 427 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 SSBP3Q9BWW4 388 aaPredicted RBP9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 PRDM14Q9GZV8 571 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 LPAR2Q9HBW0 351 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 CENPVL1A0A0U1RR11 272 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 CDX4O14627 284 aaPredicted RBP9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 GDF9O60383 454 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 NXPH1P58417 271 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 RPS20P60866 119 aaKnown RBP9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 FGF12P61328 243 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 FBXW9Q5XUX1 488 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 HIST3H2BBQ8N257 126 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 SLC25A38Q96DW6 304 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 METTL26Q96S19 204 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 WNT10AQ9GZT5 417 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 MRPL16Q9NX20 251 aaKnown RBP9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 PPIAL4EA0A075B759 164 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 PPIAL4DF5H284 164 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 DANCRP0C864 163 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 PPIAL4FP0DN26 164 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 TDGF1P3P51864 188 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 FOXA3P55318 350 aaPredicted RBP9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 CX3CL1P78423 397 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 TGIF1Q15583 401 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 TTC9CQ8N5M4 171 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 OR13C6PQ8NH95 151 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 CT55Q8WUE5 264 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 GPHA2Q96T91 129 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 PPIAL4AQ9Y536 164 aa9.24□□□□□ -0.93
PKNOX1-201ENST00000291547 PDCD11Q14690 1871 aaKnown RBP9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 TRBV9A0A0B4J1U6 114 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 A0A0U1RQV5 110 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 DLL1O00548 723 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 NPIPB7O75200 414 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 PGLYRP1O75594 196 aaPredicted RBP9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 FCGR2BP31994 310 aaPredicted RBP9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 STPG3Q8N7X2 389 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 ZNF714Q96N38 554 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 GEMIN7Q9H840 131 aaKnown RBP9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 AHCTF1Q8WYP5 2266 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 H3BTX0 84 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 EGR1P18146 543 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 RPS11P62280 158 aaKnown RBP eCLIP9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 CCL8P80075 99 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 MEF2CQ06413 473 aaPredicted RBP9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 MESP2Q0VG99 397 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 C2orf68Q2NKX9 166 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 FAM27BQ5VT28 67 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 OR52M1Q8NGK5 317 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 OR4C13Q8NGP0 309 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 SFRP2Q96HF1 295 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 ZNF414Q96IQ9 312 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 LIPFP07098 398 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 MPV17P39210 176 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 CA7P43166 264 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 LIMS1P48059 325 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 CEACAM21Q3KPI0 293 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 CCL13Q99616 98 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 TMEM160Q9NX00 188 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 FAM206AQ9NX38 181 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 TRBV5-5A0A0J9YX44 114 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 SNAI2O43623 268 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 UPK3AO75631 287 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 MC5RP33032 325 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 RRN3P1Q2M238 152 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 C10orf91Q5T1B1 145 aa9.23□□□□□ -0.93
PKNOX1-201ENST00000291547 GVINP1Q7Z2Y8 2422 aa9.22□□□□□ -0.93
PKNOX1-201ENST00000291547 IGHV2-5P01817 119 aa9.22□□□□□ -0.93
PKNOX1-201ENST00000291547 SLC25A53Q5H9E4 307 aa9.22□□□□□ -0.93
PKNOX1-201ENST00000291547 HILPDAQ9Y5L2 63 aa9.22□□□□□ -0.93
PKNOX1-201ENST00000291547 IGHV3OR16-12A0A075B7B8 117 aa9.22□□□□□ -0.93
PKNOX1-201ENST00000291547 C17orf51A8MQB3 221 aa9.22□□□□□ -0.93
PKNOX1-201ENST00000291547 IGHV4-34P06331 123 aa9.22□□□□□ -0.93
PKNOX1-201ENST00000291547 HEPN1Q6WQI6 88 aa9.22□□□□□ -0.93
PKNOX1-201ENST00000291547 OR51G1Q8NGK1 321 aa9.22□□□□□ -0.93
PKNOX1-201ENST00000291547 GPR82Q96P67 336 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms