RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CGB3P0DN86 165 aa20.77■□□□□ 0.92
ROM1-201ENST00000278833 CGB7P0DN87 165 aa20.77■□□□□ 0.92
ROM1-201ENST00000278833 TFF3Q07654 80 aa20.77■□□□□ 0.92
ROM1-201ENST00000278833 SLC16A13Q7RTY0 426 aa20.77■□□□□ 0.92
ROM1-201ENST00000278833 ZNF709Q8N972 641 aa20.77■□□□□ 0.92
ROM1-201ENST00000278833 FAM222BQ8WU58 562 aa20.77■□□□□ 0.92
ROM1-201ENST00000278833 MEGF10Q96KG7 1140 aa20.77■□□□□ 0.92
ROM1-201ENST00000278833 FAM210BQ96KR6 192 aa20.77■□□□□ 0.92
ROM1-201ENST00000278833 OR9G9P0C7N8 305 aa20.77■□□□□ 0.92
ROM1-201ENST00000278833 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.77■□□□□ 0.92
ROM1-201ENST00000278833 RFESDQ8TAC1 157 aa20.77■□□□□ 0.92
ROM1-201ENST00000278833 QTRT1Q9BXR0 403 aaKnown RBP20.77■□□□□ 0.92
ROM1-201ENST00000278833 IFI27L2Q9H2X8 130 aa20.77■□□□□ 0.92
ROM1-201ENST00000278833 SLC25A22Q9H936 323 aa20.77■□□□□ 0.92
ROM1-201ENST00000278833 BOD1L1Q8NFC6 3051 aa20.77■□□□□ 0.91
ROM1-201ENST00000278833 SMCO3A2RU48 225 aa20.76■□□□□ 0.91
ROM1-201ENST00000278833 ACOT6Q3I5F7 207 aaPredicted RBP20.76■□□□□ 0.91
ROM1-201ENST00000278833 SMIM7Q9BQ49 75 aa20.76■□□□□ 0.91
ROM1-201ENST00000278833 PYGO2Q9BRQ0 406 aa20.76■□□□□ 0.91
ROM1-201ENST00000278833 DCTN5Q9BTE1 182 aa20.76■□□□□ 0.91
ROM1-201ENST00000278833 DOK5Q9P104 306 aa20.76■□□□□ 0.91
ROM1-201ENST00000278833 ELOA3CA0A087WX78 387 aaPredicted RBP20.75■□□□□ 0.91
ROM1-201ENST00000278833 CYB5BO43169 146 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 EDDM3AQ14507 147 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 TMEM241Q24JQ0 296 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 DDB2Q92466 427 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 OR51M1Q9H341 326 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 GNG12Q9UBI6 72 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 TRGV8A0A0C4DH27 118 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 ATXN7O15265 892 aaPredicted RBP20.75■□□□□ 0.91
ROM1-201ENST00000278833 HIST1H2BKO60814 126 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 HIST1H2BJP06899 126 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 HIST1H2BOP23527 126 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 HIST1H2BBP33778 126 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 RAB7AP51149 207 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 HIST1H2BDP58876 126 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 HIST1H2BCP62807 126 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 HIST2H2BEQ16778 126 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.75■□□□□ 0.91
ROM1-201ENST00000278833 HIST1H2BHQ93079 126 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 RAB24Q969Q5 203 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 HIST1H2BNQ99877 126 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 HIST1H2BMQ99879 126 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 DUSP13Q9UII6 198 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 URGCP-MRPS24S4R325 110 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 PIEZO2Q9H5I5 2752 aa20.75■□□□□ 0.91
ROM1-201ENST00000278833 PHOX2AO14813 284 aa20.74■□□□□ 0.91
ROM1-201ENST00000278833 VDAC2P45880 294 aaPredicted RBP20.74■□□□□ 0.91
ROM1-201ENST00000278833 KLF3P57682 345 aaPredicted RBP20.74■□□□□ 0.91
ROM1-201ENST00000278833 TBR1Q16650 682 aa20.74■□□□□ 0.91
ROM1-201ENST00000278833 TMEM30BQ3MIR4 351 aa20.74■□□□□ 0.91
ROM1-201ENST00000278833 INTS1Q8N201 2190 aaKnown RBP20.74■□□□□ 0.91
ROM1-201ENST00000278833 DEFB108AA8MXU0 73 aa20.73■□□□□ 0.91
ROM1-201ENST00000278833 PRSS46E5RG02 174 aa20.73■□□□□ 0.91
ROM1-201ENST00000278833 Q8TCH9 128 aa20.73■□□□□ 0.91
ROM1-201ENST00000278833 OR2V2Q96R30 315 aa20.73■□□□□ 0.91
ROM1-201ENST00000278833 FCGR3BO75015 233 aa20.73■□□□□ 0.91
ROM1-201ENST00000278833 RBMXL2O75526 392 aaKnown RBP20.73■□□□□ 0.91
ROM1-201ENST00000278833 VENTXO95231 258 aa20.73■□□□□ 0.91
ROM1-201ENST00000278833 TIMP3P35625 211 aa20.73■□□□□ 0.91
ROM1-201ENST00000278833 ERVK-16P61578 105 aa20.73■□□□□ 0.91
ROM1-201ENST00000278833 PRAMEF5Q5TYX0 476 aa20.73■□□□□ 0.91
ROM1-201ENST00000278833 ZNF474Q6S9Z5 364 aaPredicted RBP20.73■□□□□ 0.91
ROM1-201ENST00000278833 LRP11Q86VZ4 500 aa20.73■□□□□ 0.91
ROM1-201ENST00000278833 CALYQ9NYX4 217 aa20.73■□□□□ 0.91
ROM1-201ENST00000278833 CRYAAP02489 173 aa20.72■□□□□ 0.91
ROM1-201ENST00000278833 CD1BP29016 333 aa20.72■□□□□ 0.91
ROM1-201ENST00000278833 CDC34P49427 236 aaPredicted RBP20.72■□□□□ 0.91
ROM1-201ENST00000278833 NCMAPQ5T1S8 102 aa20.72■□□□□ 0.91
ROM1-201ENST00000278833 Q6ZS92 163 aa20.72■□□□□ 0.91
ROM1-201ENST00000278833 TGIF2LYQ8IUE0 185 aa20.72■□□□□ 0.91
ROM1-201ENST00000278833 FAM215AQ9Y5M1 114 aa20.72■□□□□ 0.91
ROM1-201ENST00000278833 M0R1X1 148 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 RPL23P62829 140 aaKnown RBP20.71■□□□□ 0.91
ROM1-201ENST00000278833 RELBQ01201 579 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 BSXQ3C1V8 233 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 C1orf185Q5T7R7 199 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 OR4A16Q8NH70 328 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 NEIL1Q96FI4 390 aaPredicted RBP20.71■□□□□ 0.91
ROM1-201ENST00000278833 SDSLQ96GA7 329 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 PARLQ9H300 379 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 NIT2Q9NQR4 276 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 KMT2BQ9UMN6 2715 aaPredicted RBP20.71■□□□□ 0.91
ROM1-201ENST00000278833 IFITM10A6NMD0 228 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 FABP1P07148 127 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 PFN1P07737 140 aaKnown RBP20.71■□□□□ 0.91
ROM1-201ENST00000278833 S100PP25815 95 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 OPRK1P41145 380 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 ZNF83P51522 516 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 OR4S2Q8NH73 311 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 GSN-AS1Q9NRJ2 163 aa20.71■□□□□ 0.91
ROM1-201ENST00000278833 BSNQ9UPA5 3926 aa20.7■□□□□ 0.9
ROM1-201ENST00000278833 TRGC2P03986 189 aa20.7■□□□□ 0.9
ROM1-201ENST00000278833 LINC00205P59089 165 aa20.7■□□□□ 0.9
ROM1-201ENST00000278833 DNLZQ5SXM8 178 aa20.7■□□□□ 0.9
ROM1-201ENST00000278833 MOGAT3Q86VF5 341 aa20.7■□□□□ 0.9
ROM1-201ENST00000278833 S1PR3Q99500 378 aa20.7■□□□□ 0.9
ROM1-201ENST00000278833 TXNDC17Q9BRA2 123 aa20.7■□□□□ 0.9
ROM1-201ENST00000278833 SFXN3Q9BWM7 321 aa20.7■□□□□ 0.9
ROM1-201ENST00000278833 LINC00574Q9H8X3 128 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms