RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 MIXL1Q9H2W2 232 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 FOXA2Q9Y261 457 aaPredicted RBP13.55□□□□□ -0.24
SHANK3-201ENST00000262795 NUP214P35658 2090 aaPredicted RBP13.55□□□□□ -0.24
SHANK3-201ENST00000262795 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.55□□□□□ -0.24
SHANK3-201ENST00000262795 ZNF98A6NK75 572 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 ISLRO14498 428 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 PRB1P04280 392 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 CD99P14209 185 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 HIST1H1BP16401 226 aaKnown RBP13.55□□□□□ -0.24
SHANK3-201ENST00000262795 GEMIN7Q9H840 131 aaKnown RBP13.55□□□□□ -0.24
SHANK3-201ENST00000262795 HSPB7Q9UBY9 170 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 F11RQ9Y624 299 aaKnown RBP13.55□□□□□ -0.24
SHANK3-201ENST00000262795 DOCK3Q8IZD9 2030 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 S1PR2O95136 353 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 IL4P05112 153 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 EFNB1P98172 346 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 TIMM23BQ5SRD1 257 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 FAM216BQ8N7L0 139 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 MARVELD1Q9BSK0 173 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 FOCADQ5VW36 1801 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 H0YL77 283 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 RAMP1O60894 148 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 OR2A4O95047 310 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 OTX1P32242 354 aaPredicted RBP13.54□□□□□ -0.24
SHANK3-201ENST00000262795 AQP10Q96PS8 301 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 OR2A7Q96R45 310 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 ST6GALNAC2Q9UJ37 374 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 TFF1P04155 84 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 RCC1P18754 421 aaPredicted RBP13.54□□□□□ -0.24
SHANK3-201ENST00000262795 TNFSF10P50591 281 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 C2orf83Q53S99 150 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 BRD3OSQ6XYD6 125 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 ARHGEF17Q96PE2 2063 aaPredicted RBP13.54□□□□□ -0.24
SHANK3-201ENST00000262795 FABP2P12104 132 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 RAB9AP51151 201 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 FXYD7P58549 80 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 RPL39P5Q59GN2 51 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 PET117Q6UWS5 81 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 RAB33BQ9H082 229 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 CDC42EP3Q9UKI2 254 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 QSER1Q2KHR3 1735 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 PGPA6NDG6 321 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 ARAP2Q8WZ64 1704 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 RBFOX3A6NFN3 312 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 OR5AU1Q8NGC0 362 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 WDR34Q96EX3 536 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 MARS2Q96GW9 593 aaKnown RBP13.54□□□□□ -0.24
SHANK3-201ENST00000262795 SPSB2Q99619 263 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 CHST5Q9GZS9 411 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 TMEM191AQ9H0A3 160 aa13.54□□□□□ -0.24
SHANK3-201ENST00000262795 IGKV1-8A0A0C4DH67 115 aa13.53□□□□□ -0.24
SHANK3-201ENST00000262795 PLPP2O43688 288 aa13.53□□□□□ -0.24
SHANK3-201ENST00000262795 Q6ZT83 130 aa13.53□□□□□ -0.24
SHANK3-201ENST00000262795 OR9G4Q8NGQ1 327 aa13.53□□□□□ -0.24
SHANK3-201ENST00000262795 IFITM3Q01628 133 aa13.53□□□□□ -0.24
SHANK3-201ENST00000262795 KIAA0040Q15053 153 aa13.53□□□□□ -0.24
SHANK3-201ENST00000262795 ZNF343Q6P1L6 599 aa13.53□□□□□ -0.24
SHANK3-201ENST00000262795 OR13A1Q8NGR1 328 aa13.53□□□□□ -0.24
SHANK3-201ENST00000262795 Q9N2K0 584 aa13.53□□□□□ -0.24
SHANK3-201ENST00000262795 SPATA45Q537H7 98 aa13.53□□□□□ -0.24
SHANK3-201ENST00000262795 ST6GALNAC3Q8NDV1 305 aa13.53□□□□□ -0.24
SHANK3-201ENST00000262795 KIAA1551Q9HCM1 1747 aa13.53□□□□□ -0.24
SHANK3-201ENST00000262795 FAM74A7A6NL05 159 aa13.52□□□□□ -0.24
SHANK3-201ENST00000262795 EFEMP2O95967 443 aa13.52□□□□□ -0.24
SHANK3-201ENST00000262795 SMIM6P0DI80 62 aa13.52□□□□□ -0.24
SHANK3-201ENST00000262795 SSBP1Q04837 148 aaKnown RBP13.52□□□□□ -0.24
SHANK3-201ENST00000262795 FAM74A3Q4VXF1 159 aa13.52□□□□□ -0.24
SHANK3-201ENST00000262795 ZNF253O75346 499 aa13.52□□□□□ -0.24
SHANK3-201ENST00000262795 CD1AP06126 327 aa13.52□□□□□ -0.24
SHANK3-201ENST00000262795 TMEM95Q3KNT9 176 aa13.52□□□□□ -0.24
SHANK3-201ENST00000262795 FAM27BQ5VT28 67 aa13.52□□□□□ -0.24
SHANK3-201ENST00000262795 TBL2Q9Y4P3 447 aaKnown RBP13.52□□□□□ -0.24
SHANK3-201ENST00000262795 IGHV1-2P23083 117 aa13.52□□□□□ -0.24
SHANK3-201ENST00000262795 SEC11CQ9BY50 192 aa13.52□□□□□ -0.25
SHANK3-201ENST00000262795 TNFRSF18Q9Y5U5 241 aa13.52□□□□□ -0.25
SHANK3-201ENST00000262795 PXMP4Q9Y6I8 212 aa13.52□□□□□ -0.25
SHANK3-201ENST00000262795 RP1P56715 2156 aa13.52□□□□□ -0.25
SHANK3-201ENST00000262795 CXorf1O96002 111 aa13.52□□□□□ -0.25
SHANK3-201ENST00000262795 IL13RA2Q14627 380 aa13.52□□□□□ -0.25
SHANK3-201ENST00000262795 SPTBP11277 2137 aa13.52□□□□□ -0.25
SHANK3-201ENST00000262795 M0R381 172 aa13.52□□□□□ -0.25
SHANK3-201ENST00000262795 PTP4A3O75365 173 aa13.52□□□□□ -0.25
SHANK3-201ENST00000262795 MBNL2Q5VZF2 373 aaKnown RBP13.52□□□□□ -0.25
SHANK3-201ENST00000262795 QTRT1Q9BXR0 403 aaKnown RBP13.52□□□□□ -0.25
SHANK3-201ENST00000262795 PGPEP1Q9NXJ5 209 aa13.52□□□□□ -0.25
SHANK3-201ENST00000262795 ERVH48-1M5A8F1 160 aa13.51□□□□□ -0.25
SHANK3-201ENST00000262795 IER3P46695 156 aa13.51□□□□□ -0.25
SHANK3-201ENST00000262795 FGF12P61328 243 aa13.51□□□□□ -0.25
SHANK3-201ENST00000262795 WFIKKN1Q96NZ8 548 aa13.51□□□□□ -0.25
SHANK3-201ENST00000262795 CITED1Q99966 193 aa13.51□□□□□ -0.25
SHANK3-201ENST00000262795 COL11A2P13942 1736 aaPredicted RBP13.51□□□□□ -0.25
SHANK3-201ENST00000262795 WDFY2Q96P53 400 aa13.51□□□□□ -0.25
SHANK3-201ENST00000262795 TNS1Q9HBL0 1735 aaKnown RBP13.51□□□□□ -0.25
SHANK3-201ENST00000262795 A0A1W2PR77 199 aa13.51□□□□□ -0.25
SHANK3-201ENST00000262795 CD59P13987 128 aa13.51□□□□□ -0.25
SHANK3-201ENST00000262795 CKS2P33552 79 aa13.51□□□□□ -0.25
SHANK3-201ENST00000262795 CLEC18BQ6UXF7 455 aa13.51□□□□□ -0.25
SHANK3-201ENST00000262795 TRGV4A0A0C4DH28 118 aa13.51□□□□□ -0.25
SHANK3-201ENST00000262795 A0A1B0GV72 72 aa13.51□□□□□ -0.25
SHANK3-201ENST00000262795 NPBWR2P48146 333 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms