RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ZNF816Q0VGE8 651 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 AKIRIN2Q53H80 203 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 CLEC9AQ6UXN8 241 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 H2BFWTQ7Z2G1 175 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 OR1L4Q8NGR5 311 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 ERGIC1Q969X5 290 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM71F1Q96KD3 344 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 PURGQ9UJV8 347 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 C1orf196B1AJZ1 125 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 TXNL1O43396 289 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 EIF3GO75821 320 aaKnown RBP eCLIP4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 OMGP23515 440 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 PRDX4Q13162 271 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 STPG2Q8N412 459 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 DEFB108BQ8NET1 73 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 ELOVL5Q9NYP7 299 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 TRAV38-1A0A0B4J264 116 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 RAB4AP20338 218 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 AKR1C1Q04828 323 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 MRGPRGQ86SM5 289 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 SLC30A7Q8NEW0 376 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 PXT1Q8NFP0 134 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 OR8B3Q8NGG8 313 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 OR4D5Q8NGN0 318 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 OR10X1Q8NGY0 326 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 CXorf58Q96LI9 332 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 OR8B2Q96RD0 313 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 ARV1Q9H2C2 271 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 EHFQ9NZC4 300 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 SIX6O95475 246 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 CCL3L1P16619 93 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 CD200P41217 278 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 GPR12P47775 334 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 EFNB3Q15768 340 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 HFEQ30201 348 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 RNASE12Q5GAN4 147 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF585AQ6P3V2 769 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 OR13D1Q8NGV5 346 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 RNASE6Q93091 150 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 SEC22AQ96IW7 307 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 CHIAQ9BZP6 476 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 WDR61Q9GZS3 305 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 PIGLQ9Y2B2 252 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 POLR3KQ9Y2Y1 108 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 K7EPK0 472 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 NDUFB6O95139 128 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 GLRA1P23415 457 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF93P35789 620 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 CMC4P56277 68 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 CFHR3Q02985 330 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF616Q08AN1 781 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 SURF2Q15527 256 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM71E2Q8N5Q1 922 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF383Q8NA42 475 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 POC1AQ8NBT0 407 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 MRPL24Q96A35 216 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 GALMQ96C23 342 aa4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 THAP7Q9BT49 309 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-201ENST00000260810 IGHV4-30-2A0A087WSY4 118 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 GOSR2O14653 212 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 SPP1P10451 314 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 RPA2P15927 270 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 HIST1H1DP16402 221 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 RND1Q92730 232 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 IGHV4-61A0A0C4DH41 118 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A18PA6NE21 464 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A16PA6NEW6 464 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A20PA6NIJ5 464 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A9PA6NNJ1 464 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 SNRPGP15A8MWD9 76 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A12PA8MX19 464 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A5PA8MXJ8 464 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 UMAD1C9J7I0 102 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 KRBOX1C9JBD0 128 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 TMEM178BH3BS89 294 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 OR2F2O95006 317 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A15PP0C7V4 464 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A13PP0C7W8 464 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A14PP0C7W9 464 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A24PP0C7X0 464 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 COX6B1P14854 86 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 GIFP27352 417 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 HRH1P35367 487 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 ID1P41134 155 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 PPP1R1AQ13522 171 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 OR2F1Q13607 317 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF672Q499Z4 452 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 C1orf185Q5T7R7 199 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 C8orf46Q8TAG6 207 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 RNF141Q8WVD5 230 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 DHRS9Q9BPW9 319 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 TRAF4Q9BUZ4 470 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 ACTR3CQ9C0K3 210 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 SIRPDQ9H106 197 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 OR51J1Q9H342 316 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 K7N7A8 449 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 MGMTP16455 207 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 SRP14P37108 136 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 DSCR9P59020 149 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 FGF12P61328 243 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms