RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CENPSQ8N2Z9 138 aa11.21□□□□□ -0.61
VPS25-201ENST00000253794 RBMXL1Q96E39 390 aaKnown RBP11.21□□□□□ -0.61
VPS25-201ENST00000253794 TP53RKQ96S44 253 aa11.21□□□□□ -0.61
VPS25-201ENST00000253794 TMEM222Q9H0R3 208 aa11.21□□□□□ -0.61
VPS25-201ENST00000253794 C16orf95Q9H693 158 aa11.21□□□□□ -0.61
VPS25-201ENST00000253794 FAM240BA0A1B0GVZ2 78 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 S1PR2O95136 353 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 HKR1P10072 659 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 NQO2P16083 231 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 RELBQ01201 579 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 DCTN2Q13561 401 aaKnown RBP11.2□□□□□ -0.62
VPS25-201ENST00000253794 SGPP2Q8IWX5 399 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 TEX45Q8NA69 505 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 GLYATL2Q8WU03 294 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 C20orf85Q9H1P6 137 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 ZNF702PQ9H963 129 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 KIAA1456Q9P272 454 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 ZNF580Q9UK33 172 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 NUBP2Q9Y5Y2 271 aa11.2□□□□□ -0.62
VPS25-201ENST00000253794 FBN1P35555 2871 aaKnown RBP11.19□□□□□ -0.62
VPS25-201ENST00000253794 TEX13DA0A0J9YY54 714 aaPredicted RBP11.19□□□□□ -0.62
VPS25-201ENST00000253794 NCBP2LA6PVI3 153 aaKnown RBP11.19□□□□□ -0.62
VPS25-201ENST00000253794 CDS2O95674 445 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 IGKV1-39P01597 117 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 IGHG2P01859 326 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 IGKV1D-39P04432 117 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 CRYBA1P05813 215 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 SAA1P0DJI8 122 aaPredicted RBP11.19□□□□□ -0.62
VPS25-201ENST00000253794 LPAR6P43657 344 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 BLCAPP62952 87 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 MRGPRG-AS1Q2M3A8 158 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 VMA21Q3ZAQ7 101 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 Q6ZSV7 163 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 NRARPQ7Z6K4 114 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 TMED4Q7Z7H5 227 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 VSTM2AQ8TAG5 236 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 IL22RA2Q969J5 263 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 RHOVQ96L33 236 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 TMEM56Q96MV1 263 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 RASL11BQ9BPW5 248 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 PRSS22Q9GZN4 317 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 BET1LQ9NYM9 111 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 METTL1Q9UBP6 276 aaKnown RBP11.19□□□□□ -0.62
VPS25-201ENST00000253794 FLVCR2Q9UPI3 526 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 KCNIP3Q9Y2W7 256 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 SIGLEC9Q9Y336 463 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 TMEM56-RWDD3S4R434 201 aa11.19□□□□□ -0.62
VPS25-201ENST00000253794 MARCH11A6NNE9 402 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 ARPC1BO15143 372 aaKnown RBP11.18□□□□□ -0.62
VPS25-201ENST00000253794 SLC25A17O43808 307 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 PTTG1O95997 202 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 SERPINE2P07093 398 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 OR5AC1P0C628 307 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 P0C879 139 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 AKR1C4P17516 323 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 RAG2P55895 527 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 SRPXP78539 464 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 SRSF2Q01130 221 aaKnown RBP11.18□□□□□ -0.62
VPS25-201ENST00000253794 TMEM187Q14656 261 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 LIN54Q6MZP7 749 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 PPP1R27Q86WC6 154 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 OR4A5Q8NH83 315 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 TMEM167AQ8TBQ9 72 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 ENKURQ8TC29 256 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 R3HDM4Q96D70 268 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 SEC22AQ96IW7 307 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 FBXL15Q9H469 300 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 NUDT15Q9NV35 164 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 MMP24Q9Y5R2 645 aa11.18□□□□□ -0.62
VPS25-201ENST00000253794 PIGBOS1A0A0B4J2F0 54 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 TMEM89A2RUT3 159 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 KCNAB3O43448 404 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 PEX14O75381 377 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 ATG12O94817 140 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 OR2A4O95047 310 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 SFT2D2O95562 160 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 ANXA3P12429 323 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 PPP1R1AQ13522 171 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 KRTAP24-1Q3LI83 254 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 OR4A47Q6IF82 309 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.17□□□□□ -0.62
VPS25-201ENST00000253794 LRTM2Q8N967 370 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 OR2A7Q96R45 310 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 MARVELD1Q9BSK0 173 aa11.17□□□□□ -0.62
VPS25-201ENST00000253794 IGHV7-81A0A0B4J1V7 117 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 A0A1B0GUS0 222 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 C9orf170A2RU37 121 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 CREBL2O60519 120 aaPredicted RBP11.16□□□□□ -0.62
VPS25-201ENST00000253794 KBTBD11O94819 623 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 IGF1P05019 195 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 H2AFB2P0C5Z0 115 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 OR4E1P0C645 316 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 CRIP2P52943 208 aaPredicted RBP11.16□□□□□ -0.62
VPS25-201ENST00000253794 SSBP2P81877 361 aaPredicted RBP11.16□□□□□ -0.62
VPS25-201ENST00000253794 PRSS8Q16651 343 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 KRTAP21-3Q3LHN1 58 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 SP6Q3SY56 376 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 ZNF562Q6V9R5 426 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 Q6ZS46 218 aa11.16□□□□□ -0.62
VPS25-201ENST00000253794 VKORC1L1Q8N0U8 176 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms