RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Dtx4Q6PDK8 616 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Sectm1bQ9JL59 212 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Zfp334A2A4U6 679 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Cldn34c3J3QJW5 233 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Fgfbp1O70514 251 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Klf16P58334 251 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Pebp1P70296 187 aaKnown RBP12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Gm10750Q3V0I0 133 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 1700034E13RikQ9D2T6 108 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Fbxl17Q9QZN1 701 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Fzr1Q9R1K5 493 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Gm10358A0A1D5RLD8 333 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 TfpiO54819 306 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Ccl1P10146 92 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 GapdhP16858 333 aaKnown RBP12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Olfr922Q8VG50 311 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Olfr916Q8VG53 310 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Q9D4G1 230 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Tex43Q9D9I1 141 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Vax2Q9WTP9 292 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Gm3839S4R1W1 333 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Cacna1sQ02789 1880 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Mia3Q8BI84 1930 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 C1qaP98086 245 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 MestQ07646 335 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Rpp21Q8R040 150 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Olfr1392Q8VFA6 311 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Wdr13Q91V09 485 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Sval2Q99N75 144 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Rnf2Q9CQJ4 336 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 IcaQ9DBD0 700 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Ackr1Q9QUI6 334 aa12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Tnrc6cQ3UHC0 1690 aaKnown RBP12.38□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Ca10P61215 328 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Gm21943Q5FWD5 227 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Znf235Q61116 645 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Cd55bQ61476 407 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Tspo2Q9CRZ8 162 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Ca14Q9WVT6 337 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Mesp2O08574 370 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Syngr2O55101 224 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Pcp2P12660 120 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Rab7aP51150 207 aaKnown RBP12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Ube2l3P68037 154 aaKnown RBP12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 H1fooQ8VIK3 304 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Il24Q925S4 181 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Fam219aQ9D772 157 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Mad2l1bpQ9DCX1 276 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Cldn13Q9Z0S4 211 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Zfp972A2AW65 139 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Cldn34c2J3QNM1 233 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Cldn34c1Q8K193 234 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Tex37Q9DAG4 180 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Igkv17-127A0A0G2JDN5 117 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Olfr1179A2AUS6 307 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Cnr2P47936 347 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Masp1P98064 704 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Klk8Q61955 260 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Aqp11Q8BHH1 271 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Henmt1Q8CAE2 395 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 SdhcQ9CZB0 169 aaKnown RBP12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Ttc32Q9DAC7 148 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Wwtr1Q9EPK5 395 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Igkv7-33P01632 114 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Parp11Q8CFF0 331 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Rtn4rl1Q8K0S5 445 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Fitm1Q91V79 292 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Akirin1Q99LF1 191 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Dppa2Q9CWH0 301 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Mpc2Q9D023 127 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Olfr632Q9EPN9 317 aa12.37□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Trbv5A0A0B4J1G9 113 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Vmn1r160E9Q346 307 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Gm5426J3QNM7 103 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Vmn1r123L7N270 307 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 C3ar1O09047 477 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 P01664 111 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Wnt1P04426 370 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Defa9P50707 93 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Acyp2P56375 106 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Lsm11Q8BUV6 361 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 SinhcafQ8C8M1 221 aaKnown RBP12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Xcr1Q9R0M1 322 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Esp4A8R0T8 117 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Cmc2Q8K199 79 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Slc6a8Q8VBW1 640 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Abhd17aQ99JW1 310 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Q9CYS6 286 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Ppil1Q9D0W5 166 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Il36aQ9JLA2 160 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 FocadA2AKG8 1798 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Gm29049A0A087WSM5 227 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Gm44596A0A0N4SVA0 210 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Tarm1B6A8R8 288 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Gm21118J3QPK8 227 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Vmn1r127K7N6J5 305 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Vmn1r115K7N6Y3 295 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Onecut1O08755 465 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Rasl12Q08AT1 266 aa12.36□□□□□ -0.43
Col3a1-201ENSMUST00000087883 Gm20909Q5FWB5 227 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 100.6 ms