RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ms4a6dQ99N07 247 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 CsQ9CZU6 464 aaKnown RBP11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Wbp2nlQ9D529 359 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Chst1Q9EQC0 411 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Celsr3Q91ZI0 3301 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Trav12-1A0N8R1 115 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Chek1O35280 476 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 NrasP08556 189 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Rab19P35294 217 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 RorcP51450 516 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 AgaQ64191 346 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Lefty1Q64280 368 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Tbl1xr1Q8BHJ5 514 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm10600Q8BQ57 223 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 FarsaQ8C0C7 508 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Coro2aQ8C0P5 524 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 FrkQ922K9 512 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 NpffQ9WVA8 114 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Cldn14Q9Z0S3 239 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Prr12E9PYL2 2035 aaKnown RBP11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Mn1D3YWE6 1297 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Fkbp2P45878 140 aaKnown RBP11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Pramel5Q7TPY4 500 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr1290Q7TQX8 312 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr782Q7TRI2 314 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Cdk3Q80YP0 303 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Aqp11Q8BHH1 271 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Angptl6Q8R0Z6 457 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Mus81Q91ZJ0 551 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Tbl1xQ9QXE7 527 aa11.59□□□□□ -0.55
Nup88-201ENSMUST00000035283 Ighv1-78A0A0G2JGN3 117 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr1089A0A1L1SRK6 311 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gm13769A2ATW2 309 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr555E9Q547 315 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Pitx3O35160 302 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 PomcP01193 235 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Cxcl1P12850 96 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Hhipl1Q14DK5 791 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Slc34a1Q60825 637 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 AI987944Q7TPX5 406 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 LgalslbQ7TPX9 165 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr921Q7TRC0 313 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Crispld2Q8BZQ2 495 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Ssxb2Q8C5Z3 165 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Nectin4Q8R007 508 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr1030Q8VFL5 318 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Ighv1-42A0A0A6YY38 117 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Trbv5A0A0B4J1G9 113 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gm4950D3YUM8 205 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gm10638F6QEG2 257 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gm10097J3KMK7 105 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr893K7N678 312 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Saa1P05366 122 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 CtseP70269 397 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr142Q60881 305 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Dll1Q61483 722 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Smap2Q7TN29 428 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Lrtm1Q8BXQ3 356 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Fam110cQ8VE94 421 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr1377Q8VGH1 307 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Cyc1Q9D0M3 325 aaKnown RBP11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Cd5lQ9QWK4 352 aa11.58□□□□□ -0.56
Nup88-201ENSMUST00000035283 Igkv1-135A0A0B4J1H7 120 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Vmn1r204I7HIK1 302 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Vmn1r128L7N2B4 307 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Pdcd6P12815 191 aaKnown RBP11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 SellP18337 372 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 PpicP30412 212 aaKnown RBP11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Mas1P30554 324 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gsc2P56916 198 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Rnf224Q3UIW8 156 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr11Q60890 313 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 SlaQ60898 281 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr1137Q7TR40 310 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Sirt7Q8BKJ9 402 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Exosc6Q8BTW3 273 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 SptssaQ8R207 71 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Sco2Q8VCL2 255 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr1393Q8VFA7 311 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Olfr1298Q8VGE6 312 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Slc25a2Q99ML6 265 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Bcl2l14Q9CPT0 328 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Mansc1Q9CR33 414 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Hspb9Q9DAM3 168 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 GrinaQ9ESF4 345 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Sp5Q9JHX2 398 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 RprmQ9JJ72 109 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 MgaA2AWL7 3003 aaKnown RBP11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Igkv14-126A0A075B5K0 117 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Rpl23a-ps3A0A140T8M7 156 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Foxh1O88621 401 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Rims4P60191 269 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Rpl23aP62751 156 aaKnown RBP11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Vamp2P63044 116 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Tsr3Q5HZH2 323 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Mtch2Q791V5 303 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 ErasQ7TN89 227 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Plcxd3Q8BLJ3 321 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Gpr84Q8CIM5 396 aa11.57□□□□□ -0.56
Nup88-201ENSMUST00000035283 Vrk3Q8K3G5 453 aa11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms