RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 CXCL9Q07325 125 aa15.6■□□□□ 0.09
PHGDH-220ENST00000641570 DACT2Q5SW24 774 aa15.6■□□□□ 0.09
PHGDH-220ENST00000641570 AIDAQ96BJ3 306 aa15.6■□□□□ 0.09
PHGDH-220ENST00000641570 EDC3Q96F86 508 aaKnown RBP15.6■□□□□ 0.09
PHGDH-220ENST00000641570 DDRGK1Q96HY6 314 aa15.6■□□□□ 0.09
PHGDH-220ENST00000641570 ANTXR1Q9H6X2 564 aa15.6■□□□□ 0.09
PHGDH-220ENST00000641570 PIH1D3Q9NQM4 214 aaKnown RBP15.6■□□□□ 0.09
PHGDH-220ENST00000641570 TMOD2Q9NZR1 351 aa15.6■□□□□ 0.09
PHGDH-220ENST00000641570 MYO1BO43795 1136 aa15.59■□□□□ 0.09
PHGDH-220ENST00000641570 VIL1P09327 827 aaKnown RBP15.59■□□□□ 0.09
PHGDH-220ENST00000641570 USP17L8P0C7I0 530 aa15.59■□□□□ 0.09
PHGDH-220ENST00000641570 PRDX5P30044 214 aa15.59■□□□□ 0.09
PHGDH-220ENST00000641570 KIAA1211Q6ZU35 1233 aa15.59■□□□□ 0.09
PHGDH-220ENST00000641570 COL1A1P02452 1464 aaPredicted RBP15.59■□□□□ 0.09
PHGDH-220ENST00000641570 PDE6AP16499 860 aa15.58■□□□□ 0.08
PHGDH-220ENST00000641570 PLCG2P16885 1265 aa15.58■□□□□ 0.08
PHGDH-220ENST00000641570 MECOMQ03112 1051 aa15.58■□□□□ 0.08
PHGDH-220ENST00000641570 UPF2Q9HAU5 1272 aaKnown RBP15.58■□□□□ 0.08
PHGDH-220ENST00000641570 ZNF541Q9H0D2 1346 aa15.58■□□□□ 0.08
PHGDH-220ENST00000641570 IQCA1LA6NCM1 817 aa15.57■□□□□ 0.08
PHGDH-220ENST00000641570 GMPSP49915 693 aaPredicted RBP15.57■□□□□ 0.08
PHGDH-220ENST00000641570 SCNN1DP51172 638 aa15.57■□□□□ 0.08
PHGDH-220ENST00000641570 UBE3CQ15386 1083 aa15.57■□□□□ 0.08
PHGDH-220ENST00000641570 DLGAP5Q15398 846 aa15.57■□□□□ 0.08
PHGDH-220ENST00000641570 CWC27Q6UX04 472 aaKnown RBP15.57■□□□□ 0.08
PHGDH-220ENST00000641570 APPBP2Q92624 585 aa15.57■□□□□ 0.08
PHGDH-220ENST00000641570 MXD3Q9BW11 206 aa15.57■□□□□ 0.08
PHGDH-220ENST00000641570 KCNQ5Q9NR82 932 aa15.57■□□□□ 0.08
PHGDH-220ENST00000641570 ZBTB12Q9Y330 459 aaPredicted RBP15.57■□□□□ 0.08
PHGDH-220ENST00000641570 ZNF532Q9HCE3 1301 aa15.57■□□□□ 0.08
PHGDH-220ENST00000641570 MYH13Q9UKX3 1938 aa15.56■□□□□ 0.08
PHGDH-220ENST00000641570 MAGEB6P1A0A0J9YX57 407 aa15.56■□□□□ 0.08
PHGDH-220ENST00000641570 ADD2P35612 726 aa15.56■□□□□ 0.08
PHGDH-220ENST00000641570 AMOTL1Q8IY63 956 aa15.56■□□□□ 0.08
PHGDH-220ENST00000641570 DPF2Q92785 391 aa15.56■□□□□ 0.08
PHGDH-220ENST00000641570 NSUN4Q96CB9 384 aaKnown RBP15.56■□□□□ 0.08
PHGDH-220ENST00000641570 HELLSQ9NRZ9 838 aa15.56■□□□□ 0.08
PHGDH-220ENST00000641570 SERPINA10Q9UK55 444 aa15.56■□□□□ 0.08
PHGDH-220ENST00000641570 MROH7-TTC4A0A0A0MT08 1334 aa15.56■□□□□ 0.08
PHGDH-220ENST00000641570 RAD50Q92878 1312 aa15.56■□□□□ 0.08
PHGDH-220ENST00000641570 CRKP46108 304 aa15.55■□□□□ 0.08
PHGDH-220ENST00000641570 HDLBPQ00341 1268 aaKnown RBP15.55■□□□□ 0.08
PHGDH-220ENST00000641570 MCMDC2Q4G0Z9 681 aa15.55■□□□□ 0.08
PHGDH-220ENST00000641570 MICALL2Q8IY33 904 aa15.55■□□□□ 0.08
PHGDH-220ENST00000641570 CRNKL1Q9BZJ0 848 aaKnown RBP15.55■□□□□ 0.08
PHGDH-220ENST00000641570 NACAP1Q9BZK3 213 aa15.55■□□□□ 0.08
PHGDH-220ENST00000641570 REC8O95072 547 aa15.54■□□□□ 0.08
PHGDH-220ENST00000641570 APPP05067 770 aa15.54■□□□□ 0.08
PHGDH-220ENST00000641570 GNAT2P19087 354 aa15.54■□□□□ 0.08
PHGDH-220ENST00000641570 BTDP43251 543 aa15.54■□□□□ 0.08
PHGDH-220ENST00000641570 PRELPP51888 382 aa15.54■□□□□ 0.08
PHGDH-220ENST00000641570 NMIQ13287 307 aaPredicted RBP15.54■□□□□ 0.08
PHGDH-220ENST00000641570 DIXDC1Q155Q3 683 aa15.54■□□□□ 0.08
PHGDH-220ENST00000641570 CFAP100Q494V2 611 aa15.54■□□□□ 0.08
PHGDH-220ENST00000641570 HHIPL2Q6UWX4 724 aa15.54■□□□□ 0.08
PHGDH-220ENST00000641570 CERS5Q8N5B7 392 aa15.54■□□□□ 0.08
PHGDH-220ENST00000641570 MIGA1Q8NAN2 632 aa15.54■□□□□ 0.08
PHGDH-220ENST00000641570 AATFQ9NY61 560 aaKnown RBP eCLIP15.54■□□□□ 0.08
PHGDH-220ENST00000641570 CNOT7Q9UIV1 285 aaKnown RBP15.54■□□□□ 0.08
PHGDH-220ENST00000641570 SRCAPQ6ZRS2 3230 aa15.53■□□□□ 0.08
PHGDH-220ENST00000641570 GLTPD2A6NH11 291 aa15.53■□□□□ 0.08
PHGDH-220ENST00000641570 DDNO94850 711 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-220ENST00000641570 CHMLP26374 656 aa15.53■□□□□ 0.08
PHGDH-220ENST00000641570 USP5P45974 858 aa15.53■□□□□ 0.08
PHGDH-220ENST00000641570 RBM26Q5T8P6 1007 aaKnown RBP15.53■□□□□ 0.08
PHGDH-220ENST00000641570 MYOZ2Q9NPC6 264 aa15.53■□□□□ 0.08
PHGDH-220ENST00000641570 HACL1Q9UJ83 578 aa15.53■□□□□ 0.08
PHGDH-220ENST00000641570 TIAM2Q8IVF5 1701 aa15.53■□□□□ 0.08
PHGDH-220ENST00000641570 COL4A5P29400 1685 aa15.52■□□□□ 0.08
PHGDH-220ENST00000641570 MBD4O95243 580 aa15.52■□□□□ 0.08
PHGDH-220ENST00000641570 MCCP23508 829 aa15.52■□□□□ 0.08
PHGDH-220ENST00000641570 KIF4BQ2VIQ3 1234 aa15.52■□□□□ 0.08
PHGDH-220ENST00000641570 ZMYM1Q5SVZ6 1142 aa15.52■□□□□ 0.08
PHGDH-220ENST00000641570 TEX11Q8IYF3 940 aa15.52■□□□□ 0.08
PHGDH-220ENST00000641570 MRIQ9BWK5 157 aa15.52■□□□□ 0.08
PHGDH-220ENST00000641570 ANO2Q9NQ90 1003 aa15.52■□□□□ 0.08
PHGDH-220ENST00000641570 CHD4Q14839 1912 aa15.51■□□□□ 0.07
PHGDH-220ENST00000641570 CCDC171Q6TFL3 1326 aa15.51■□□□□ 0.07
PHGDH-220ENST00000641570 GPAA1O43292 621 aa15.51■□□□□ 0.07
PHGDH-220ENST00000641570 TNNI2P48788 182 aa15.51■□□□□ 0.07
PHGDH-220ENST00000641570 FAM227BQ96M60 508 aa15.51■□□□□ 0.07
PHGDH-220ENST00000641570 ZDHHC15Q96MV8 337 aa15.51■□□□□ 0.07
PHGDH-220ENST00000641570 VEZTQ9HBM0 779 aa15.51■□□□□ 0.07
PHGDH-220ENST00000641570 ADARB2Q9NS39 739 aaKnown RBP15.51■□□□□ 0.07
PHGDH-220ENST00000641570 USP40Q9NVE5 1235 aa15.51■□□□□ 0.07
PHGDH-220ENST00000641570 GPRC5DQ9NZD1 345 aa15.51■□□□□ 0.07
PHGDH-220ENST00000641570 DAGLAQ9Y4D2 1042 aa15.51■□□□□ 0.07
PHGDH-220ENST00000641570 MAST2Q6P0Q8 1798 aa15.51■□□□□ 0.07
PHGDH-220ENST00000641570 GOLGB1Q14789 3259 aaKnown RBP15.5■□□□□ 0.07
PHGDH-220ENST00000641570 A0A0D9SFI3 127 aa15.5■□□□□ 0.07
PHGDH-220ENST00000641570 TDO2P48775 406 aa15.5■□□□□ 0.07
PHGDH-220ENST00000641570 TNFAIP1Q13829 316 aa15.5■□□□□ 0.07
PHGDH-220ENST00000641570 TBC1D10BQ4KMP7 808 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-220ENST00000641570 ESYT1Q9BSJ8 1104 aa15.5■□□□□ 0.07
PHGDH-220ENST00000641570 TRIM34Q9BYJ4 488 aa15.5■□□□□ 0.07
PHGDH-220ENST00000641570 ARMT1Q9H993 441 aa15.5■□□□□ 0.07
PHGDH-220ENST00000641570 SLC4A4Q9Y6R1 1079 aa15.5■□□□□ 0.07
PHGDH-220ENST00000641570 GAKO14976 1311 aa15.49■□□□□ 0.07
PHGDH-220ENST00000641570 ZNF280AP59817 542 aaPredicted RBP15.49■□□□□ 0.07
PHGDH-220ENST00000641570 GRIK5Q16478 980 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms