RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 PSMC4P43686 418 aa12.49□□□□□ -0.41
PHGDH-212ENST00000641247 KCNJ4P48050 445 aa12.49□□□□□ -0.41
PHGDH-212ENST00000641247 FKBP1AP62942 108 aaKnown RBP12.49□□□□□ -0.41
PHGDH-212ENST00000641247 KSR2Q6VAB6 950 aa12.49□□□□□ -0.41
PHGDH-212ENST00000641247 TSPYL6Q8N831 410 aa12.49□□□□□ -0.41
PHGDH-212ENST00000641247 U2AF1L4Q8WU68 220 aaKnown RBP12.49□□□□□ -0.41
PHGDH-212ENST00000641247 ZKSCAN4Q969J2 545 aaPredicted RBP12.49□□□□□ -0.41
PHGDH-212ENST00000641247 MPHOSPH8Q99549 860 aa12.49□□□□□ -0.41
PHGDH-212ENST00000641247 HTATIP2Q9BUP3 242 aa12.49□□□□□ -0.41
PHGDH-212ENST00000641247 RNF208Q9H0X6 261 aa12.49□□□□□ -0.41
PHGDH-212ENST00000641247 RIPOR2Q9Y4F9 1068 aa12.49□□□□□ -0.41
PHGDH-212ENST00000641247 GNRH1P01148 92 aa12.48□□□□□ -0.41
PHGDH-212ENST00000641247 CACNB3P54284 484 aa12.48□□□□□ -0.41
PHGDH-212ENST00000641247 PRMT2P55345 433 aa12.48□□□□□ -0.41
PHGDH-212ENST00000641247 DDX10Q13206 875 aaKnown RBP12.48□□□□□ -0.41
PHGDH-212ENST00000641247 KIF22Q14807 665 aa12.48□□□□□ -0.41
PHGDH-212ENST00000641247 G2E3Q7L622 706 aa12.48□□□□□ -0.41
PHGDH-212ENST00000641247 DZIP1LQ8IYY4 767 aaKnown RBP12.48□□□□□ -0.41
PHGDH-212ENST00000641247 RUNDC1Q96C34 613 aa12.48□□□□□ -0.41
PHGDH-212ENST00000641247 PLA2G12BQ9BX93 195 aa12.48□□□□□ -0.41
PHGDH-212ENST00000641247 UNC93B1Q9H1C4 597 aa12.48□□□□□ -0.41
PHGDH-212ENST00000641247 NR2E3Q9Y5X4 410 aa12.48□□□□□ -0.41
PHGDH-212ENST00000641247 LAMA3Q16787 3333 aa12.47□□□□□ -0.41
PHGDH-212ENST00000641247 ADGRA2Q96PE1 1338 aa12.47□□□□□ -0.41
PHGDH-212ENST00000641247 A0A1W2PPC1 479 aa12.47□□□□□ -0.41
PHGDH-212ENST00000641247 FARP2O94887 1054 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-212ENST00000641247 SGPL1O95470 568 aa12.47□□□□□ -0.41
PHGDH-212ENST00000641247 CETPP11597 493 aa12.47□□□□□ -0.41
PHGDH-212ENST00000641247 PRKCZQ05513 592 aa12.47□□□□□ -0.41
PHGDH-212ENST00000641247 NKX2-3Q8TAU0 364 aa12.47□□□□□ -0.41
PHGDH-212ENST00000641247 GABRQQ9UN88 632 aa12.47□□□□□ -0.41
PHGDH-212ENST00000641247 ADAMTS8Q9UP79 889 aa12.47□□□□□ -0.41
PHGDH-212ENST00000641247 OTOFQ9HC10 1997 aa12.47□□□□□ -0.41
PHGDH-212ENST00000641247 MYPNQ86TC9 1320 aa12.46□□□□□ -0.41
PHGDH-212ENST00000641247 FMNL1O95466 1100 aaPredicted RBP12.46□□□□□ -0.41
PHGDH-212ENST00000641247 DDX58O95786 925 aaKnown RBP12.46□□□□□ -0.41
PHGDH-212ENST00000641247 MOGSQ13724 837 aa12.46□□□□□ -0.41
PHGDH-212ENST00000641247 ERO1BQ86YB8 467 aa12.46□□□□□ -0.41
PHGDH-212ENST00000641247 DEFB123Q8N688 67 aa12.46□□□□□ -0.41
PHGDH-212ENST00000641247 RAET1EQ8TD07 263 aa12.46□□□□□ -0.41
PHGDH-212ENST00000641247 GDF15Q99988 308 aa12.46□□□□□ -0.41
PHGDH-212ENST00000641247 TTF2Q9UNY4 1162 aaKnown RBP12.46□□□□□ -0.41
PHGDH-212ENST00000641247 CSADQ9Y600 493 aa12.46□□□□□ -0.41
PHGDH-212ENST00000641247 FAM205AQ6ZU69 1335 aa12.45□□□□□ -0.42
PHGDH-212ENST00000641247 EVI5O60447 810 aa12.45□□□□□ -0.42
PHGDH-212ENST00000641247 CRKP46108 304 aa12.45□□□□□ -0.42
PHGDH-212ENST00000641247 TNFAIP1Q13829 316 aa12.45□□□□□ -0.42
PHGDH-212ENST00000641247 GCKRQ14397 625 aa12.45□□□□□ -0.42
PHGDH-212ENST00000641247 MFSD14BQ5SR56 506 aa12.45□□□□□ -0.42
PHGDH-212ENST00000641247 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-212ENST00000641247 TDRD7Q8NHU6 1098 aaKnown RBP12.45□□□□□ -0.42
PHGDH-212ENST00000641247 ZNF594Q96JF6 807 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-212ENST00000641247 ZCCHC17Q9NP64 241 aaKnown RBP12.45□□□□□ -0.42
PHGDH-212ENST00000641247 SERPINA10Q9UK55 444 aa12.45□□□□□ -0.42
PHGDH-212ENST00000641247 GTF3C3Q9Y5Q9 886 aa12.45□□□□□ -0.42
PHGDH-212ENST00000641247 A0A0C4DFX4 3053 aa12.44□□□□□ -0.42
PHGDH-212ENST00000641247 SPEF2Q9C093 1822 aa12.44□□□□□ -0.42
PHGDH-212ENST00000641247 PDHXO00330 501 aa12.44□□□□□ -0.42
PHGDH-212ENST00000641247 FOXO4P98177 505 aa12.44□□□□□ -0.42
PHGDH-212ENST00000641247 PPIL2Q13356 520 aa12.44□□□□□ -0.42
PHGDH-212ENST00000641247 SNAPC2Q13487 334 aa12.44□□□□□ -0.42
PHGDH-212ENST00000641247 ZNF804AQ7Z570 1209 aa12.44□□□□□ -0.42
PHGDH-212ENST00000641247 WRNIP1Q96S55 665 aa12.44□□□□□ -0.42
PHGDH-212ENST00000641247 MTMR10Q9NXD2 777 aa12.44□□□□□ -0.42
PHGDH-212ENST00000641247 STXBP5LQ9Y2K9 1186 aa12.44□□□□□ -0.42
PHGDH-212ENST00000641247 ANKRD18BA2A2Z9 1011 aa12.43□□□□□ -0.42
PHGDH-212ENST00000641247 PLIN1O60240 522 aa12.43□□□□□ -0.42
PHGDH-212ENST00000641247 CYP2C8P10632 490 aa12.43□□□□□ -0.42
PHGDH-212ENST00000641247 BCRP11274 1271 aa12.43□□□□□ -0.42
PHGDH-212ENST00000641247 ELNP15502 786 aa12.43□□□□□ -0.42
PHGDH-212ENST00000641247 INPP5BP32019 993 aa12.43□□□□□ -0.42
PHGDH-212ENST00000641247 GYG1P46976 350 aa12.43□□□□□ -0.42
PHGDH-212ENST00000641247 EPHA10Q5JZY3 1008 aa12.43□□□□□ -0.42
PHGDH-212ENST00000641247 CCDC30Q5VVM6 783 aa12.43□□□□□ -0.42
PHGDH-212ENST00000641247 MIGA2Q7L4E1 593 aa12.43□□□□□ -0.42
PHGDH-212ENST00000641247 ANKRD23Q86SG2 305 aa12.43□□□□□ -0.42
PHGDH-212ENST00000641247 DIS3LQ8TF46 1054 aaKnown RBP12.43□□□□□ -0.42
PHGDH-212ENST00000641247 PAWRQ96IZ0 340 aaKnown RBP12.43□□□□□ -0.42
PHGDH-212ENST00000641247 IFT57Q9NWB7 429 aa12.43□□□□□ -0.42
PHGDH-212ENST00000641247 BIN2Q9UBW5 565 aaPredicted RBP12.43□□□□□ -0.42
PHGDH-212ENST00000641247 HOXD10P28358 340 aa12.42□□□□□ -0.42
PHGDH-212ENST00000641247 BMP8BP34820 402 aa12.42□□□□□ -0.42
PHGDH-212ENST00000641247 BCAMP50895 628 aa12.42□□□□□ -0.42
PHGDH-212ENST00000641247 UBXN2AP68543 259 aa12.42□□□□□ -0.42
PHGDH-212ENST00000641247 NEXNQ0ZGT2 675 aa12.42□□□□□ -0.42
PHGDH-212ENST00000641247 GPAT2Q6NUI2 795 aa12.42□□□□□ -0.42
PHGDH-212ENST00000641247 FAM84BQ96KN1 310 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-212ENST00000641247 DEFB118Q96PH6 123 aa12.42□□□□□ -0.42
PHGDH-212ENST00000641247 ZMYND8Q9ULU4 1186 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-212ENST00000641247 CUL9Q8IWT3 2517 aa12.41□□□□□ -0.42
PHGDH-212ENST00000641247 WDHD1O75717 1129 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-212ENST00000641247 TFRCP02786 760 aaKnown RBP12.41□□□□□ -0.42
PHGDH-212ENST00000641247 PPATQ06203 517 aa12.41□□□□□ -0.42
PHGDH-212ENST00000641247 GPR153Q6NV75 609 aa12.41□□□□□ -0.42
PHGDH-212ENST00000641247 CRISPLD2Q9H0B8 497 aa12.41□□□□□ -0.42
PHGDH-212ENST00000641247 APAF1O14727 1248 aa12.4□□□□□ -0.42
PHGDH-212ENST00000641247 ADCY3O60266 1144 aa12.4□□□□□ -0.42
PHGDH-212ENST00000641247 INHAP05111 366 aa12.4□□□□□ -0.42
PHGDH-212ENST00000641247 SYN1P17600 705 aa12.4□□□□□ -0.42
PHGDH-212ENST00000641247 TNNI2P48788 182 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms