RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 QSER1Q2KHR3 1735 aa25.78■■□□□ 1.72
SCARB2-212ENST00000638663 PATL2C9JE40 543 aaKnown RBP25.77■■□□□ 1.72
SCARB2-212ENST00000638663 ZNF213O14771 459 aa25.77■■□□□ 1.72
SCARB2-212ENST00000638663 ALDH1B1P30837 517 aa25.77■■□□□ 1.72
SCARB2-212ENST00000638663 TDRD7Q8NHU6 1098 aaKnown RBP25.77■■□□□ 1.72
SCARB2-212ENST00000638663 TBC1D16Q8TBP0 767 aa25.77■■□□□ 1.72
SCARB2-212ENST00000638663 PDGFDQ9GZP0 370 aaPredicted RBP25.77■■□□□ 1.72
SCARB2-212ENST00000638663 ME3Q16798 604 aa25.76■■□□□ 1.72
SCARB2-212ENST00000638663 NAA16Q6N069 864 aaPredicted RBP25.76■■□□□ 1.72
SCARB2-212ENST00000638663 DHX32Q7L7V1 743 aaKnown RBP25.76■■□□□ 1.72
SCARB2-212ENST00000638663 TNPO1Q92973 898 aaKnown RBP25.76■■□□□ 1.72
SCARB2-212ENST00000638663 SH2B1Q9NRF2 756 aaPredicted RBP25.76■■□□□ 1.72
SCARB2-212ENST00000638663 CACNA1SQ13698 1873 aa25.76■■□□□ 1.71
SCARB2-212ENST00000638663 LRRC37AA6NMS7 1700 aa25.76■■□□□ 1.71
SCARB2-212ENST00000638663 LAMA4Q16363 1823 aa25.76■■□□□ 1.71
SCARB2-212ENST00000638663 C6orf229H3BNL8 230 aa25.76■■□□□ 1.71
SCARB2-212ENST00000638663 ZBTB22O15209 634 aa25.76■■□□□ 1.71
SCARB2-212ENST00000638663 PRKAB2O43741 272 aa25.76■■□□□ 1.71
SCARB2-212ENST00000638663 Q6ZUG5 572 aa25.76■■□□□ 1.71
SCARB2-212ENST00000638663 ZNF384Q8TF68 577 aa25.76■■□□□ 1.71
SCARB2-212ENST00000638663 LRRC2Q9BYS8 371 aa25.76■■□□□ 1.71
SCARB2-212ENST00000638663 EPB41L4AQ9HCS5 686 aaPredicted RBP25.76■■□□□ 1.71
SCARB2-212ENST00000638663 PRDX5P30044 214 aa25.75■■□□□ 1.71
SCARB2-212ENST00000638663 C2CD5Q86YS7 1000 aa25.75■■□□□ 1.71
SCARB2-212ENST00000638663 ZNF622Q969S3 477 aaKnown RBP eCLIP25.75■■□□□ 1.71
SCARB2-212ENST00000638663 SLC4A4Q9Y6R1 1079 aa25.75■■□□□ 1.71
SCARB2-212ENST00000638663 MAGEB6P1A0A0J9YX57 407 aa25.75■■□□□ 1.71
SCARB2-212ENST00000638663 GNAT2P19087 354 aa25.75■■□□□ 1.71
SCARB2-212ENST00000638663 NUCB2P80303 420 aa25.75■■□□□ 1.71
SCARB2-212ENST00000638663 MECOMQ03112 1051 aa25.75■■□□□ 1.71
SCARB2-212ENST00000638663 PKP1Q13835 747 aa25.75■■□□□ 1.71
SCARB2-212ENST00000638663 ALX1Q15699 326 aa25.75■■□□□ 1.71
SCARB2-212ENST00000638663 OLFM4Q6UX06 510 aa25.75■■□□□ 1.71
SCARB2-212ENST00000638663 CCDC83Q8IWF9 413 aa25.75■■□□□ 1.71
SCARB2-212ENST00000638663 IFNL3Q8IZI9 196 aa25.75■■□□□ 1.71
SCARB2-212ENST00000638663 NSUN4Q96CB9 384 aaKnown RBP25.75■■□□□ 1.71
SCARB2-212ENST00000638663 GSG1L2A8MUP6 293 aa25.74■■□□□ 1.71
SCARB2-212ENST00000638663 EXOSC10Q01780 885 aaKnown RBP25.73■■□□□ 1.71
SCARB2-212ENST00000638663 NECAB1Q8N987 351 aa25.73■■□□□ 1.71
SCARB2-212ENST00000638663 NAPBQ9H115 298 aa25.73■■□□□ 1.71
SCARB2-212ENST00000638663 CD209Q9NNX6 404 aa25.73■■□□□ 1.71
SCARB2-212ENST00000638663 FGD1P98174 961 aa25.73■■□□□ 1.71
SCARB2-212ENST00000638663 WDR66Q8TBY9 1149 aa25.73■■□□□ 1.71
SCARB2-212ENST00000638663 NBPF3Q9H094 633 aa25.73■■□□□ 1.71
SCARB2-212ENST00000638663 LTBP1Q14766 1721 aa25.72■■□□□ 1.71
SCARB2-212ENST00000638663 H0YIN7 160 aa25.72■■□□□ 1.71
SCARB2-212ENST00000638663 RIOK1Q9BRS2 568 aaKnown RBP25.72■■□□□ 1.71
SCARB2-212ENST00000638663 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.72■■□□□ 1.71
SCARB2-212ENST00000638663 ZMYM6O95789 1325 aa25.72■■□□□ 1.71
SCARB2-212ENST00000638663 DYNLL1P63167 89 aaKnown RBP25.71■■□□□ 1.71
SCARB2-212ENST00000638663 ST3GAL1Q11201 340 aa25.71■■□□□ 1.71
SCARB2-212ENST00000638663 SPTY2D1Q68D10 685 aaPredicted RBP25.71■■□□□ 1.71
SCARB2-212ENST00000638663 CHST3Q7LGC8 479 aa25.71■■□□□ 1.71
SCARB2-212ENST00000638663 NACAP1Q9BZK3 213 aa25.71■■□□□ 1.71
SCARB2-212ENST00000638663 TBC1D10CQ8IV04 446 aa25.71■■□□□ 1.71
SCARB2-212ENST00000638663 MPNDQ8N594 471 aa25.71■■□□□ 1.71
SCARB2-212ENST00000638663 BRF1Q92994 677 aa25.71■■□□□ 1.71
SCARB2-212ENST00000638663 SALL1Q9NSC2 1324 aa25.7■■□□□ 1.71
SCARB2-212ENST00000638663 IL1R1P14778 569 aa25.7■■□□□ 1.7
SCARB2-212ENST00000638663 NCOA7Q8NI08 942 aa25.7■■□□□ 1.7
SCARB2-212ENST00000638663 CHRNA5P30532 468 aa25.69■■□□□ 1.7
SCARB2-212ENST00000638663 TDO2P48775 406 aa25.69■■□□□ 1.7
SCARB2-212ENST00000638663 DZIP1Q86YF9 867 aaKnown RBP25.69■■□□□ 1.7
SCARB2-212ENST00000638663 RIMBP2O15034 1052 aa25.69■■□□□ 1.7
SCARB2-212ENST00000638663 MCM4P33991 863 aa25.69■■□□□ 1.7
SCARB2-212ENST00000638663 STK3Q13188 491 aa25.69■■□□□ 1.7
SCARB2-212ENST00000638663 STYK1Q6J9G0 422 aa25.69■■□□□ 1.7
SCARB2-212ENST00000638663 RALYLQ86SE5 291 aaKnown RBP25.69■■□□□ 1.7
SCARB2-212ENST00000638663 MB21D2Q8IYB1 491 aaPredicted RBP25.69■■□□□ 1.7
SCARB2-212ENST00000638663 SDR42E1Q8WUS8 393 aa25.69■■□□□ 1.7
SCARB2-212ENST00000638663 TMX4Q9H1E5 349 aaPredicted RBP25.69■■□□□ 1.7
SCARB2-212ENST00000638663 SMC3Q9UQE7 1217 aa25.69■■□□□ 1.7
SCARB2-212ENST00000638663 ZDHHC9Q9Y397 364 aa25.69■■□□□ 1.7
SCARB2-212ENST00000638663 LDHBP07195 334 aaKnown RBP25.68■■□□□ 1.7
SCARB2-212ENST00000638663 DPP8Q6V1X1 898 aaPredicted RBP25.68■■□□□ 1.7
SCARB2-212ENST00000638663 DTNBO60941 627 aa25.67■■□□□ 1.7
SCARB2-212ENST00000638663 MAST2Q6P0Q8 1798 aa25.67■■□□□ 1.7
SCARB2-212ENST00000638663 TRDNQ13061 729 aa25.67■■□□□ 1.7
SCARB2-212ENST00000638663 AGXT2Q9BYV1 514 aa25.67■■□□□ 1.7
SCARB2-212ENST00000638663 MCM5P33992 734 aa25.66■■□□□ 1.7
SCARB2-212ENST00000638663 CTDSPL2Q05D32 466 aa25.66■■□□□ 1.7
SCARB2-212ENST00000638663 GRIK5Q16478 980 aa25.66■■□□□ 1.7
SCARB2-212ENST00000638663 GBP4Q96PP9 640 aa25.66■■□□□ 1.7
SCARB2-212ENST00000638663 AATFQ9NY61 560 aaKnown RBP eCLIP25.66■■□□□ 1.7
SCARB2-212ENST00000638663 CCDC88AQ3V6T2 1871 aa25.66■■□□□ 1.7
SCARB2-212ENST00000638663 DUOX1Q9NRD9 1551 aa25.66■■□□□ 1.7
SCARB2-212ENST00000638663 PRC1O43663 620 aa25.65■■□□□ 1.7
SCARB2-212ENST00000638663 APOBRQ0VD83 1088 aa25.65■■□□□ 1.7
SCARB2-212ENST00000638663 ANTXR2P58335 489 aa25.65■■□□□ 1.7
SCARB2-212ENST00000638663 FOXD4L5Q5VV16 416 aaPredicted RBP25.65■■□□□ 1.7
SCARB2-212ENST00000638663 TMED8Q6PL24 325 aaPredicted RBP25.65■■□□□ 1.7
SCARB2-212ENST00000638663 FOXD4L4Q8WXT5 416 aaPredicted RBP25.65■■□□□ 1.7
SCARB2-212ENST00000638663 ZC3H12CQ9C0D7 883 aaKnown RBP25.65■■□□□ 1.7
SCARB2-212ENST00000638663 GJB2P29033 226 aa25.64■■□□□ 1.69
SCARB2-212ENST00000638663 CCDC125Q86Z20 511 aa25.64■■□□□ 1.69
SCARB2-212ENST00000638663 INCENPQ9NQS7 918 aa25.64■■□□□ 1.69
SCARB2-212ENST00000638663 GPHNQ9NQX3 736 aaPredicted RBP25.64■■□□□ 1.69
SCARB2-212ENST00000638663 NEDD4P46934 1319 aa25.63■■□□□ 1.69
SCARB2-212ENST00000638663 NKX2-3Q8TAU0 364 aa25.63■■□□□ 1.69
SCARB2-212ENST00000638663 ZNF219Q9P2Y4 722 aaPredicted RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms