RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 POP1Q99575 1024 aaKnown RBP4.64□□□□□ -1.67
GYPB-216ENST00000638448 TINF2Q9BSI4 451 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 CHRDQ9H2X0 955 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 C12orf49Q9H741 205 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 RNF112Q9ULX5 631 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 KRTAP9-6A0A140TA67 174 aa4.63□□□□□ -1.67
GYPB-216ENST00000638448 H3BRJ5 948 aa4.63□□□□□ -1.67
GYPB-216ENST00000638448 DDX3YO15523 660 aaKnown RBP4.63□□□□□ -1.67
GYPB-216ENST00000638448 TRPA1O75762 1119 aa4.63□□□□□ -1.67
GYPB-216ENST00000638448 CTSHP09668 335 aa4.63□□□□□ -1.67
GYPB-216ENST00000638448 CES1P23141 567 aa4.63□□□□□ -1.67
GYPB-216ENST00000638448 CANXP27824 592 aaKnown RBP4.63□□□□□ -1.67
GYPB-216ENST00000638448 C8orf34Q49A92 452 aa4.63□□□□□ -1.67
GYPB-216ENST00000638448 FAM117BQ6P1L5 589 aa4.63□□□□□ -1.67
GYPB-216ENST00000638448 KIAA1211Q6ZU35 1233 aa4.63□□□□□ -1.67
GYPB-216ENST00000638448 ADAM19Q9H013 955 aa4.63□□□□□ -1.67
GYPB-216ENST00000638448 FAM8A1Q9UBU6 413 aa4.63□□□□□ -1.67
GYPB-216ENST00000638448 SALL4Q9UJQ4 1053 aa4.63□□□□□ -1.67
GYPB-216ENST00000638448 FAM177BA6PVY3 158 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 NFKBIEO00221 500 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 GNL2Q13823 731 aaKnown RBP4.62□□□□□ -1.67
GYPB-216ENST00000638448 ARMC10Q8N2F6 343 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 KLHL23Q8NBE8 558 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 CCDC74AQ96AQ1 378 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 KLHDC7BQ96G42 594 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 SETDB2Q96T68 719 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 CCSER2Q9H7U1 834 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 ZFYVE28Q9HCC9 887 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 SEC31BQ9NQW1 1179 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 DZANK1Q9NVP4 752 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 RAXQ9Y2V3 346 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 USP31Q70CQ4 1352 aa4.62□□□□□ -1.67
GYPB-216ENST00000638448 PDE2AO00408 941 aaPredicted RBP4.61□□□□□ -1.67
GYPB-216ENST00000638448 PHACTR2O75167 634 aa4.61□□□□□ -1.67
GYPB-216ENST00000638448 NLRP12P59046 1061 aa4.61□□□□□ -1.67
GYPB-216ENST00000638448 PIP4K2BP78356 416 aa4.61□□□□□ -1.67
GYPB-216ENST00000638448 DUOXA2Q1HG44 320 aa4.61□□□□□ -1.67
GYPB-216ENST00000638448 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.61□□□□□ -1.67
GYPB-216ENST00000638448 HS2ST1Q7LGA3 356 aa4.61□□□□□ -1.67
GYPB-216ENST00000638448 GALNT12Q8IXK2 581 aa4.61□□□□□ -1.67
GYPB-216ENST00000638448 UTP4Q969X6 686 aaKnown RBP4.61□□□□□ -1.67
GYPB-216ENST00000638448 FAM46AQ96IP4 442 aaKnown RBP4.61□□□□□ -1.67
GYPB-216ENST00000638448 CEP41Q9BYV8 373 aa4.61□□□□□ -1.67
GYPB-216ENST00000638448 RNF19AQ9NV58 838 aa4.61□□□□□ -1.67
GYPB-216ENST00000638448 DDX41Q9UJV9 622 aaKnown RBP4.61□□□□□ -1.67
GYPB-216ENST00000638448 SOX13Q9UN79 622 aa4.61□□□□□ -1.67
GYPB-216ENST00000638448 EREGO14944 169 aa4.6□□□□□ -1.67
GYPB-216ENST00000638448 DHX15O43143 795 aaKnown RBP4.6□□□□□ -1.67
GYPB-216ENST00000638448 SSTR4P31391 388 aa4.6□□□□□ -1.67
GYPB-216ENST00000638448 CABP4P57796 275 aa4.6□□□□□ -1.67
GYPB-216ENST00000638448 UVSSAQ2YD98 709 aa4.6□□□□□ -1.67
GYPB-216ENST00000638448 HGSNATQ68CP4 663 aa4.6□□□□□ -1.67
GYPB-216ENST00000638448 ZNF654Q8IZM8 581 aa4.6□□□□□ -1.67
GYPB-216ENST00000638448 SLC7A3Q8WY07 619 aa4.6□□□□□ -1.67
GYPB-216ENST00000638448 WNT8BQ93098 351 aa4.6□□□□□ -1.67
GYPB-216ENST00000638448 ZKSCAN3Q9BRR0 538 aa4.6□□□□□ -1.67
GYPB-216ENST00000638448 NOC4LQ9BVI4 516 aaKnown RBP4.6□□□□□ -1.67
GYPB-216ENST00000638448 PCMTD2Q9NV79 361 aa4.6□□□□□ -1.67
GYPB-216ENST00000638448 FOXD3Q9UJU5 478 aaPredicted RBP4.6□□□□□ -1.67
GYPB-216ENST00000638448 PPM1HQ9ULR3 514 aa4.6□□□□□ -1.67
GYPB-216ENST00000638448 TRAK1Q9UPV9 953 aa4.6□□□□□ -1.67
GYPB-216ENST00000638448 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.6□□□□□ -1.67
GYPB-216ENST00000638448 TGFB1P01137 390 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 IGLV1-40P01703 118 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 XRCC5P13010 732 aaKnown RBP4.59□□□□□ -1.67
GYPB-216ENST00000638448 PREPP48147 710 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 GJA8P48165 433 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 TAF1CQ15572 869 aaPredicted RBP4.59□□□□□ -1.67
GYPB-216ENST00000638448 KIAA0319Q5VV43 1072 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 PRPF40BQ6NWY9 871 aaKnown RBP4.59□□□□□ -1.67
GYPB-216ENST00000638448 ERMP1Q7Z2K6 904 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 TMEM102Q8N9M5 508 aaPredicted RBP4.59□□□□□ -1.67
GYPB-216ENST00000638448 SPATA32Q96LK8 384 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 MYRFLQ96LU7 910 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 OSMRQ99650 979 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 OSBPL7Q9BZF2 842 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 C7orf69Q9H7B7 122 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 OSGEPQ9NPF4 335 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 LATS2Q9NRM7 1088 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 STOML1Q9UBI4 398 aa4.59□□□□□ -1.67
GYPB-216ENST00000638448 HMX2A2RU54 273 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 GSC2O15499 205 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 EDN3P14138 238 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 GSTT1P30711 240 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 CD97P48960 835 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 C9orf131Q5VYM1 1079 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 ANKRD34AQ69YU3 496 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.58□□□□□ -1.68
GYPB-216ENST00000638448 VN1R5Q7Z5H4 357 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 SLC51AQ86UW1 340 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 ZDHHC13Q8IUH4 622 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 TRIM42Q8IWZ5 723 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 FAM20CQ8IXL6 584 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 RUSC1Q9BVN2 902 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 RNF208Q9H0X6 261 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 ZFYVE1Q9HBF4 777 aa4.58□□□□□ -1.68
GYPB-216ENST00000638448 MED26O95402 600 aa4.57□□□□□ -1.68
GYPB-216ENST00000638448 USP17L7P0C7H9 530 aa4.57□□□□□ -1.68
GYPB-216ENST00000638448 RLBP1P12271 317 aa4.57□□□□□ -1.68
GYPB-216ENST00000638448 C19orf57Q0VDD7 668 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms