RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 GABPB1Q06547 395 aaPredicted RBP10.11□□□□□ -0.79
NECAP1-210ENST00000638237 CEP135Q66GS9 1140 aa10.11□□□□□ -0.79
NECAP1-210ENST00000638237 NSUN7Q8NE18 718 aaKnown RBP10.11□□□□□ -0.79
NECAP1-210ENST00000638237 NKX2-3Q8TAU0 364 aa10.11□□□□□ -0.79
NECAP1-210ENST00000638237 GOLGA6L19H0YKK7 550 aa10.11□□□□□ -0.79
NECAP1-210ENST00000638237 CTAGE5O15320 804 aa10.11□□□□□ -0.79
NECAP1-210ENST00000638237 CTSWP56202 376 aa10.11□□□□□ -0.79
NECAP1-210ENST00000638237 TRIM28Q13263 835 aaKnown RBP10.11□□□□□ -0.79
NECAP1-210ENST00000638237 DZIP3Q86Y13 1208 aaKnown RBP10.11□□□□□ -0.79
NECAP1-210ENST00000638237 RIPOR2Q9Y4F9 1068 aa10.11□□□□□ -0.79
NECAP1-210ENST00000638237 MORC2Q9Y6X9 1032 aaPredicted RBP10.11□□□□□ -0.79
NECAP1-210ENST00000638237 PLCH1Q4KWH8 1693 aa10.11□□□□□ -0.79
NECAP1-210ENST00000638237 PTPDC1A2A3K4 754 aa10.1□□□□□ -0.79
NECAP1-210ENST00000638237 H3BQV1 296 aa10.1□□□□□ -0.79
NECAP1-210ENST00000638237 EXOC5O00471 708 aa10.1□□□□□ -0.79
NECAP1-210ENST00000638237 IFFO2Q5TF58 517 aa10.1□□□□□ -0.79
NECAP1-210ENST00000638237 NYAP1Q6ZVC0 841 aa10.1□□□□□ -0.79
NECAP1-210ENST00000638237 FGAP02671 866 aa10.1□□□□□ -0.79
NECAP1-210ENST00000638237 PHKA1P46020 1223 aa10.1□□□□□ -0.79
NECAP1-210ENST00000638237 EXOSC10Q01780 885 aaKnown RBP10.1□□□□□ -0.79
NECAP1-210ENST00000638237 NAA30Q147X3 362 aaPredicted RBP10.1□□□□□ -0.79
NECAP1-210ENST00000638237 STX1AQ16623 288 aa10.1□□□□□ -0.79
NECAP1-210ENST00000638237 PLA2G12BQ9BX93 195 aa10.1□□□□□ -0.79
NECAP1-210ENST00000638237 TEX13AQ9BXU3 409 aaPredicted RBP10.1□□□□□ -0.79
NECAP1-210ENST00000638237 GPAA1O43292 621 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 C11orf57Q6ZUT1 292 aaPredicted RBP10.09□□□□□ -0.79
NECAP1-210ENST00000638237 KIF18AQ8NI77 898 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 CNKSR2Q8WXI2 1034 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 KCND1Q9NSA2 647 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 GJB4Q9NTQ9 266 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 AKAP2Q9Y2D5 859 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 DDX60Q8IY21 1712 aaKnown RBP10.09□□□□□ -0.79
NECAP1-210ENST00000638237 COL4A1P02462 1669 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 ANKRD18BA2A2Z9 1011 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 PFKFB2O60825 505 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 IDH1O75874 414 aaKnown RBP10.09□□□□□ -0.79
NECAP1-210ENST00000638237 PTPN14Q15678 1187 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 OTUD7BQ6GQQ9 843 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 VGLL2Q8N8G2 317 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 PHLPP1O60346 1717 aa10.09□□□□□ -0.79
NECAP1-210ENST00000638237 SKILP12757 684 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 PDIA3P30101 505 aaKnown RBP10.08□□□□□ -0.8
NECAP1-210ENST00000638237 ADD1P35611 737 aaKnown RBP10.08□□□□□ -0.8
NECAP1-210ENST00000638237 TAF3Q5VWG9 929 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 ZNF397Q8NF99 534 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-210ENST00000638237 SMARCC2Q8TAQ2 1214 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 LLPHQ9BRT6 129 aaKnown RBP10.08□□□□□ -0.8
NECAP1-210ENST00000638237 SEC31BQ9NQW1 1179 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 RCOR1Q9UKL0 485 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 CDHR2Q9BYE9 1310 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 USP27XA6NNY8 438 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 BRD2P25440 801 aaKnown RBP10.08□□□□□ -0.8
NECAP1-210ENST00000638237 KCNQ4P56696 695 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 SLC9C2Q5TAH2 1124 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 SMIM5Q71RC9 77 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 ZNF592Q92610 1267 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 APPBP2Q92624 585 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 AGXT2Q9BYV1 514 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 PIH1D3Q9NQM4 214 aaKnown RBP10.08□□□□□ -0.8
NECAP1-210ENST00000638237 WWC3Q9ULE0 1092 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 CASZ1Q86V15 1759 aa10.08□□□□□ -0.8
NECAP1-210ENST00000638237 A0A087WWV3 80 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 IGSF3O75054 1194 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 HMGB1P09429 215 aaKnown RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 RXRAP19793 462 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 CCZ1BP86790 482 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 CCZ1P86791 482 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 SNW1Q13573 536 aaKnown RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 ARID5BQ14865 1188 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 CCDC102BQ68D86 513 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 NAA16Q6N069 864 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 ZNF215Q9UL58 517 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 BAZ2BQ9UIF8 2168 aaKnown RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 CCDC69A6NI79 296 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 NUTM2BA6NNL0 878 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 BECN2A8MW95 431 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 NUTM2EB1AL46 878 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 PDE8AO60658 829 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 PDE8BO95263 885 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 ATP6V1AP38606 617 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 ANTXR2P58335 489 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 IMMTQ16891 758 aaKnown RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 KMT5BQ4FZB7 885 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 SUSD4Q5VX71 490 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 ATL3Q6DD88 541 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 ZNF771Q7L3S4 317 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 NUTM2AQ8IVF1 878 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 CCAR1Q8IX12 1150 aaKnown RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 DHX40Q8IX18 779 aaKnown RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 CCAR2Q8N163 923 aaKnown RBP10.07□□□□□ -0.8
NECAP1-210ENST00000638237 ERO1AQ96HE7 468 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 INCENPQ9NQS7 918 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 ANO10Q9NW15 660 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 ECM29Q5VYK3 1845 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 SALL1Q9NSC2 1324 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 CARMIL3Q8ND23 1372 aa10.07□□□□□ -0.8
NECAP1-210ENST00000638237 KIF2AO00139 706 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-210ENST00000638237 PRC1O43663 620 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms