RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-240	ENST00000637432	NECAB1	Q8N987	351 aa		18.21	■□□□□ 0.51
CACNA1A-240	ENST00000637432	MAGED2	Q9UNF1	606 aa	Predicted RBP	18.21	■□□□□ 0.51
CACNA1A-240	ENST00000637432	STX17	P56962	302 aa		18.21	■□□□□ 0.5
CACNA1A-240	ENST00000637432	NXN	Q6DKJ4	435 aa		18.21	■□□□□ 0.5
CACNA1A-240	ENST00000637432	STMN2	Q93045	179 aa		18.21	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SWAP70	Q9UH65	585 aa		18.21	■□□□□ 0.5
CACNA1A-240	ENST00000637432	ALDH3A1	P30838	453 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	CYLC1	P35663	651 aa	Predicted RBP	18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	FAM114A2	Q9NRY5	505 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	CLUL1	Q15846	466 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	DDB1	Q16531	1140 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	DNAAF4	Q8WXU2	420 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	ESR2	Q92731	530 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	GNPAT	O15228	680 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	CIB2	O75838	187 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	NBPF1	Q3BBV0	1214 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SPDYE1	Q8NFV5	336 aa	Predicted RBP	18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	RAD51AP2	Q09MP3	1159 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	MICAL1	Q8TDZ2	1067 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	KIFAP3	Q92845	792 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	LMCD1	Q9NZU5	365 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	TBC1D7	Q9P0N9	293 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	LDHB	P07195	334 aa	Known RBP	18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	INPP1	P49441	399 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	CPLX4	Q7Z7G2	160 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	CABLES1	Q8TDN4	633 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SMTN	P53814	917 aa		18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	18.2	■□□□□ 0.5
CACNA1A-240	ENST00000637432	CDAN1	Q8IWY9	1227 aa		18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	KRT23	Q9C075	422 aa		18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	VIM	P08670	466 aa	Known RBP	18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	IRX3	P78415	501 aa	Predicted RBP	18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SYNDIG1	Q9H7V2	258 aa		18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SYNDIG1L	A6NDD5	238 aa		18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	ZNF131	P52739	623 aa		18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	CCDC122	Q5T0U0	273 aa		18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SPOP	O43791	374 aa		18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SLC12A1	Q13621	1099 aa		18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	METTL14	Q9HCE5	456 aa	Known RBP	18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	MOSPD1	Q9UJG1	213 aa		18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	DMRT2	Q9Y5R5	561 aa		18.19	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SLC39A6	Q13433	755 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	RMDN2	Q96LZ7	410 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	RSPH14	Q9UHP6	348 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	ERCC6L	Q2NKX8	1250 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	CTAGE5	O15320	804 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	STK32B	Q9NY57	414 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	ABT1	Q9ULW3	272 aa	Known RBP	18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SEL1L2	Q5TEA6	688 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	AZI2	Q9H6S1	392 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	LRPPRC	P42704	1394 aa	Known RBP	18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	ZNF467	Q7Z7K2	595 aa	Predicted RBP	18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	APOL6	Q9BWW8	343 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	STMN4	Q9H169	189 aa	Predicted RBP	18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	STIM2	Q9P246	746 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	RBM27	Q9P2N5	1060 aa	Known RBP	18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	BCS1L	Q9Y276	419 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SLC12A2	P55011	1212 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	AFAP1L2	Q8N4X5	818 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SCAPER	Q9BY12	1400 aa		18.18	■□□□□ 0.5
CACNA1A-240	ENST00000637432	XPA	P23025	273 aa	Predicted RBP	18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	LARGE2	Q8N3Y3	721 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	EVI5L	Q96CN4	794 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	NUCKS1	Q9H1E3	243 aa	Known RBP	18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	GUCA1B	Q9UMX6	200 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	BICDL2	A1A5D9	508 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	ARHGEF2	Q92974	986 aa	Known RBP	18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	TCEANC2	Q96MN5	208 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	KRT2	P35908	639 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	PYM1	Q9BRP8	204 aa	Known RBP	18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	CTAGE9	A4FU28	777 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	TMPO	P42166	694 aa	Known RBP	18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	LCA5	Q86VQ0	697 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	MMS19	Q96T76	1030 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	ST7	Q9NRC1	585 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	POLI	Q9UNA4	740 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	CAPN9	O14815	690 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	EPB41	P11171	864 aa	Known RBP	18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	RBM17	Q96I25	401 aa	Known RBP	18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	ARHGEF10L	Q9HCE6	1279 aa		18.17	■□□□□ 0.5
CACNA1A-240	ENST00000637432	IGBP1	P78318	339 aa		18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	TRAF1	Q13077	416 aa		18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	ANKRD24	Q8TF21	1146 aa		18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	MRPL46	Q9H2W6	279 aa	Known RBP	18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	KRT79	Q5XKE5	535 aa		18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	SUFU	Q9UMX1	484 aa		18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	DZIP3	Q86Y13	1208 aa	Known RBP	18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	KARS	Q15046	597 aa	Known RBP	18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	UTP14C	Q5TAP6	766 aa	Known RBP	18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	UBN1	Q9NPG3	1134 aa		18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	AKNA	Q7Z591	1439 aa		18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	ANKRD30B	Q9BXX2	1392 aa		18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	PSMA7	O14818	248 aa		18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	ADCY5	O95622	1261 aa		18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	GSTA1	P08263	222 aa		18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	GSTA2	P09210	222 aa		18.16	■□□□□ 0.5
CACNA1A-240	ENST00000637432	PPP4R3B	Q5MIZ7	849 aa		18.15	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms