RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	SYK	P43405	635 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	LRMP	Q12912	555 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ZNF654	Q8IZM8	581 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CPXCR1	Q8N123	301 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	SUFU	Q9UMX1	484 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	MX2	P20592	715 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	INF2	Q27J81	1249 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CEBPA	P49715	358 aa	Predicted RBP	18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	SETDB1	Q15047	1291 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ZNF165	P49910	485 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	IFI16	Q16666	785 aa	Known RBP	18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	MAGEB6	Q8N7X4	407 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	RABGAP1	Q9Y3P9	1069 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CIB2	O75838	187 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ANKS4B	Q8N8V4	417 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	JDP2	Q8WYK2	163 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	STMN2	Q93045	179 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	NUF2	Q9BZD4	464 aa		18.4	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ALKBH8	Q96BT7	664 aa	Known RBP	18.39	■□□□□ 0.54
CACNA1A-238	ENST00000637276	TRAPPC10	P48553	1259 aa		18.39	■□□□□ 0.53
CACNA1A-238	ENST00000637276	MYO1A	Q9UBC5	1043 aa		18.39	■□□□□ 0.53
CACNA1A-238	ENST00000637276	CDR2	Q01850	454 aa		18.39	■□□□□ 0.53
CACNA1A-238	ENST00000637276	NIP7	Q9Y221	180 aa	Known RBP eCLIP	18.39	■□□□□ 0.53
CACNA1A-238	ENST00000637276	CUX1	P39880	1505 aa		18.39	■□□□□ 0.53
CACNA1A-238	ENST00000637276	IFNLR1	Q8IU57	520 aa	Predicted RBP	18.39	■□□□□ 0.53
CACNA1A-238	ENST00000637276	ATIC	P31939	592 aa		18.39	■□□□□ 0.53
CACNA1A-238	ENST00000637276	PICK1	Q9NRD5	415 aa		18.39	■□□□□ 0.53
CACNA1A-238	ENST00000637276	TRIM35	Q9UPQ4	493 aa		18.39	■□□□□ 0.53
CACNA1A-238	ENST00000637276	ESYT2	A0FGR8	921 aa		18.38	■□□□□ 0.53
CACNA1A-238	ENST00000637276	BLVRA	P53004	296 aa		18.38	■□□□□ 0.53
CACNA1A-238	ENST00000637276	CABLES1	Q8TDN4	633 aa		18.38	■□□□□ 0.53
CACNA1A-238	ENST00000637276	APOL6	Q9BWW8	343 aa		18.38	■□□□□ 0.53
CACNA1A-238	ENST00000637276	CTNND2	Q9UQB3	1225 aa		18.38	■□□□□ 0.53
CACNA1A-238	ENST00000637276	ANKRD35	Q8N283	1001 aa		18.38	■□□□□ 0.53
CACNA1A-238	ENST00000637276	AQR	O60306	1485 aa	Known RBP eCLIP	18.38	■□□□□ 0.53
CACNA1A-238	ENST00000637276	RDH13	Q8NBN7	331 aa		18.38	■□□□□ 0.53
CACNA1A-238	ENST00000637276	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.38	■□□□□ 0.53
CACNA1A-238	ENST00000637276	KIF2A	O00139	706 aa	Predicted RBP	18.38	■□□□□ 0.53
CACNA1A-238	ENST00000637276	ATP2A1	O14983	1001 aa		18.38	■□□□□ 0.53
CACNA1A-238	ENST00000637276	TOP2A	P11388	1531 aa	Known RBP	18.38	■□□□□ 0.53
CACNA1A-238	ENST00000637276	HMGB1	P09429	215 aa	Known RBP	18.37	■□□□□ 0.53
CACNA1A-238	ENST00000637276	TRPC3	Q13507	836 aa		18.37	■□□□□ 0.53
CACNA1A-238	ENST00000637276	MCM9	Q9NXL9	1143 aa		18.37	■□□□□ 0.53
CACNA1A-238	ENST00000637276	BNIP3L	O60238	219 aa		18.37	■□□□□ 0.53
CACNA1A-238	ENST00000637276	OAT	P04181	439 aa		18.37	■□□□□ 0.53
CACNA1A-238	ENST00000637276	PPP1R42	Q7Z4L9	355 aa		18.37	■□□□□ 0.53
CACNA1A-238	ENST00000637276	CTAGE5	O15320	804 aa		18.37	■□□□□ 0.53
CACNA1A-238	ENST00000637276	ZNF569	Q5MCW4	686 aa		18.37	■□□□□ 0.53
CACNA1A-238	ENST00000637276	INPP1	P49441	399 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	RTN1	Q16799	776 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	PSPC1	Q8WXF1	523 aa	Known RBP	18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	DNAJC25	Q9H1X3	360 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	STK38L	Q9Y2H1	464 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	FIS1	Q9Y3D6	152 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	MAGEB6P1	A0A0J9YX57	407 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	NAA16	Q6N069	864 aa	Predicted RBP	18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	PPP1R16B	Q96T49	567 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276		Q6ZUG5	572 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	EVI5L	Q96CN4	794 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	GPR162	Q16538	588 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	CCDC102B	Q68D86	513 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	INTS8	Q75QN2	995 aa	Known RBP	18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	CFTR	P13569	1480 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	NCOA2	Q15596	1464 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	ARPP19	P56211	112 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	SCYL2	Q6P3W7	929 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	NCOA7	Q8NI08	942 aa		18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	18.36	■□□□□ 0.53
CACNA1A-238	ENST00000637276	NEK11	Q8NG66	645 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	NOC2L	Q9Y3T9	749 aa	Known RBP	18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	SPOP	O43791	374 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	PLVAP	Q9BX97	442 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	TMOD4	Q9NZQ9	345 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	MOSPD1	Q9UJG1	213 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	GAPVD1	Q14C86	1478 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	IGBP1	P78318	339 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	HINFP	Q9BQA5	517 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	SMYD2	Q9NRG4	433 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	CCNT1	O60563	726 aa	Known RBP	18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	ATP2A2	P16615	1042 aa	Known RBP	18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	USP48	Q86UV5	1035 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	SCYL1	Q96KG9	808 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	NAP1L4	Q99733	375 aa	Known RBP	18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	ZBTB41	Q5SVQ8	909 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	CDC26	Q8NHZ8	85 aa		18.35	■□□□□ 0.53
CACNA1A-238	ENST00000637276	RARS	P54136	660 aa	Known RBP	18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	RRP36	Q96EU6	259 aa	Known RBP	18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	INPP5F	Q9Y2H2	1132 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	GSDMD	P57764	484 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	ZNF174	Q15697	407 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	RILP	Q96NA2	401 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	CCDC77	Q9BR77	488 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	RIOK1	Q9BRS2	568 aa	Known RBP	18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	WDR44	Q5JSH3	913 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	C10orf67	Q8IYJ2	551 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	PI4KAP2	A4QPH2	592 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	CCDC152	Q4G0S7	254 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	PI4KAP1	Q8N8J0	262 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	XAB2	Q9HCS7	855 aa	Known RBP	18.34	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms