RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 HNRNPLLQ8WVV9 542 aaKnown RBP6.9□□□□□ -1.3
CHD2-221ENST00000635856 ATRIPQ8WXE1 791 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 RBM17Q96I25 401 aaKnown RBP6.9□□□□□ -1.3
CHD2-221ENST00000635856 TUBB2BQ9BVA1 445 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 NOP53Q9NZM5 478 aaKnown RBP6.9□□□□□ -1.3
CHD2-221ENST00000635856 DDX20Q9UHI6 824 aaKnown RBP6.9□□□□□ -1.3
CHD2-221ENST00000635856 ITM2BQ9Y287 266 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 THRAP3Q9Y2W1 955 aaKnown RBP6.9□□□□□ -1.3
CHD2-221ENST00000635856 USP16Q9Y5T5 823 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 TROQ12816 1431 aaPredicted RBP6.9□□□□□ -1.31
CHD2-221ENST00000635856 DNAJC8O75937 253 aaPredicted RBP6.9□□□□□ -1.31
CHD2-221ENST00000635856 TROVE2P10155 538 aaKnown RBP eCLIP6.9□□□□□ -1.31
CHD2-221ENST00000635856 MAP3K9P80192 1104 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 STIM1Q13586 685 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 LCA5Q86VQ0 697 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 POLR3CQ9BUI4 534 aaPredicted RBP6.9□□□□□ -1.31
CHD2-221ENST00000635856 DNAJC25Q9H1X3 360 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 SLC40A1Q9NP59 571 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 TUBA8Q9NY65 449 aaPredicted RBP6.9□□□□□ -1.31
CHD2-221ENST00000635856 KDM2AQ9Y2K7 1162 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 CTTNBP2Q8WZ74 1663 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 CTAGE15A4D2H0 777 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 CTAGE8P0CG41 777 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 SCNN1BP51168 640 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 GNAI1P63096 354 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 CTAGE6Q86UF2 777 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 CTAGE4Q8IX94 777 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 CCDC155Q8N6L0 562 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 TMEM87AQ8NBN3 555 aa6.9□□□□□ -1.31
CHD2-221ENST00000635856 JAKMIP1Q96N16 626 aaKnown RBP6.9□□□□□ -1.31
CHD2-221ENST00000635856 ZEB2O60315 1214 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 FLT3P36888 993 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 ZBED6P86452 979 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 PUS10Q3MIT2 529 aaKnown RBP6.89□□□□□ -1.31
CHD2-221ENST00000635856 SAMD3Q8N6K7 520 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 HELBQ8NG08 1087 aaPredicted RBP6.89□□□□□ -1.31
CHD2-221ENST00000635856 NSMCE1Q8WV22 266 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 UPF3BQ9BZI7 483 aaKnown RBP6.89□□□□□ -1.31
CHD2-221ENST00000635856 EVC2Q86UK5 1308 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 CYP11B2P19099 503 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 PIP4K2BP78356 416 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 SEPT7Q16181 437 aaKnown RBP6.89□□□□□ -1.31
CHD2-221ENST00000635856 STX1AQ16623 288 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 CCDC93Q567U6 631 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 MYOCDQ8IZQ8 938 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 TBC1D5Q92609 795 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 ANO10Q9NW15 660 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 U3KPZ7 1027 aaPredicted RBP6.89□□□□□ -1.31
CHD2-221ENST00000635856 TARBP1Q13395 1621 aaKnown RBP6.89□□□□□ -1.31
CHD2-221ENST00000635856 SPDYE3A6NKU9 549 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 STXBP3O00186 592 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 MAP2K7O14733 419 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 CBFA2T2O43439 604 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 TMCC1O94876 653 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 RHOXF2BP0C7M4 288 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 PCK1P35558 622 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 VPS53Q5VIR6 699 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 PRPF40BQ6NWY9 871 aaKnown RBP6.89□□□□□ -1.31
CHD2-221ENST00000635856 RHOXF2Q9BQY4 288 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 VCPKMTQ9H867 229 aa6.89□□□□□ -1.31
CHD2-221ENST00000635856 RABL2AQ9UBK7 228 aaPredicted RBP6.89□□□□□ -1.31
CHD2-221ENST00000635856 STX6O43752 255 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 CTCFP49711 727 aaPredicted RBP6.88□□□□□ -1.31
CHD2-221ENST00000635856 RHBDL3P58872 404 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 ADCY1Q08828 1119 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 CCDC144BQ3MJ40 725 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 SFMBT2Q5VUG0 894 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 CDCA2Q69YH5 1023 aaPredicted RBP6.88□□□□□ -1.31
CHD2-221ENST00000635856 CYB5D1Q6P9G0 228 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 CCDC144CPQ8IYA2 1237 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 TEX9Q8N6V9 391 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 TTC14Q96N46 770 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.88□□□□□ -1.312e-7■■□□□ 13.7
CHD2-221ENST00000635856 USP26Q9BXU7 913 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 EPC1Q9H2F5 836 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 M0R2C6 588 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 AP5Z1O43299 807 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 CLTAP09496 248 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 HNRNPMP52272 730 aaKnown RBP eCLIP6.88□□□□□ -1.317e-7■■■■□ 21.5
CHD2-221ENST00000635856 CCDC152Q4G0S7 254 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 GGT6Q6P531 493 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 USP33Q8TEY7 942 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 TEKT4Q8WW24 435 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 SRCIN1Q9C0H9 1055 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 ABCB6Q9NP58 842 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 PUF60Q9UHX1 559 aaKnown RBP6.88□□□□□ -1.31
CHD2-221ENST00000635856 DAAM1Q9Y4D1 1078 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 ATXN2Q99700 1313 aaKnown RBP6.88□□□□□ -1.31
CHD2-221ENST00000635856 B4DLN1 442 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 LIN7AO14910 233 aaPredicted RBP6.88□□□□□ -1.31
CHD2-221ENST00000635856 HNRNPCP07910 306 aaKnown RBP eCLIP6.88□□□□□ -1.313e-8■■■□□ 15.1
CHD2-221ENST00000635856 CNGA1P29973 690 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 IRAK1P51617 712 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 TMF1P82094 1093 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 IFT88Q13099 833 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 MIS18BP1Q6P0N0 1132 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 IRX2Q9BZI1 471 aaPredicted RBP6.88□□□□□ -1.31
CHD2-221ENST00000635856 ANKIB1Q9P2G1 1089 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 MYO1AQ9UBC5 1043 aa6.88□□□□□ -1.31
CHD2-221ENST00000635856 SPATA31E1Q6ZUB1 1445 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms