RNA–Protein interactions for RNA: ENST00000630147.1

SPTAN1-220, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-220ENST00000630147 CCDC184Q52MB2 194 aa13.38□□□□□ -0.27
SPTAN1-220ENST00000630147 MFSD14BQ5SR56 506 aa13.38□□□□□ -0.27
SPTAN1-220ENST00000630147 LMBR1LQ6UX01 489 aa13.38□□□□□ -0.27
SPTAN1-220ENST00000630147 LINS1Q8NG48 757 aa13.38□□□□□ -0.27
SPTAN1-220ENST00000630147 CNNM1Q9NRU3 951 aa13.38□□□□□ -0.27
SPTAN1-220ENST00000630147 SALL2Q9Y467 1007 aaPredicted RBP13.38□□□□□ -0.27
SPTAN1-220ENST00000630147 TESPA1A2RU30 521 aaPredicted RBP13.37□□□□□ -0.27
SPTAN1-220ENST00000630147 H0YGN5 161 aa13.37□□□□□ -0.27
SPTAN1-220ENST00000630147 C15orf52Q6ZUT6 534 aaKnown RBP13.37□□□□□ -0.27
SPTAN1-220ENST00000630147 TEPSINQ96N21 525 aa13.37□□□□□ -0.27
SPTAN1-220ENST00000630147 ZFYVE28Q9HCC9 887 aa13.37□□□□□ -0.27
SPTAN1-220ENST00000630147 CHAF1AQ13111 956 aaPredicted RBP13.36□□□□□ -0.27
SPTAN1-220ENST00000630147 LDHAL6AQ6ZMR3 332 aa13.36□□□□□ -0.27
SPTAN1-220ENST00000630147 DZIP1LQ8IYY4 767 aaKnown RBP13.36□□□□□ -0.27
SPTAN1-220ENST00000630147 CHMP4AQ9BY43 222 aa13.36□□□□□ -0.27
SPTAN1-220ENST00000630147 PUS3Q9BZE2 481 aaKnown RBP13.36□□□□□ -0.27
SPTAN1-220ENST00000630147 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
SPTAN1-220ENST00000630147 CACNA1FO60840 1977 aa13.35□□□□□ -0.27
SPTAN1-220ENST00000630147 CRKP46108 304 aa13.35□□□□□ -0.27
SPTAN1-220ENST00000630147 MAP3K9P80192 1104 aa13.35□□□□□ -0.27
SPTAN1-220ENST00000630147 TNFAIP1Q13829 316 aa13.35□□□□□ -0.27
SPTAN1-220ENST00000630147 CCDC57Q2TAC2 916 aa13.35□□□□□ -0.27
SPTAN1-220ENST00000630147 CHRDL2Q6WN34 429 aa13.35□□□□□ -0.27
SPTAN1-220ENST00000630147 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
SPTAN1-220ENST00000630147 CSADQ9Y600 493 aa13.35□□□□□ -0.27
SPTAN1-220ENST00000630147 GTF2A2P52657 109 aa13.34□□□□□ -0.27
SPTAN1-220ENST00000630147 FKBP1AP62942 108 aaKnown RBP13.34□□□□□ -0.27
SPTAN1-220ENST00000630147 MTFR1Q15390 333 aa13.34□□□□□ -0.27
SPTAN1-220ENST00000630147 NBPF11Q86T75 865 aa13.34□□□□□ -0.27
SPTAN1-220ENST00000630147 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.272e-19■□□□□ 11.2
SPTAN1-220ENST00000630147 ZKSCAN4Q969J2 545 aaPredicted RBP13.34□□□□□ -0.27
SPTAN1-220ENST00000630147 SNCAIPQ9Y6H5 919 aa13.34□□□□□ -0.27
SPTAN1-220ENST00000630147 FAM205AQ6ZU69 1335 aa13.34□□□□□ -0.27
SPTAN1-220ENST00000630147 AK9Q5TCS8 1911 aa13.33□□□□□ -0.28
SPTAN1-220ENST00000630147 UNCXA6NJT0 531 aa13.33□□□□□ -0.28
SPTAN1-220ENST00000630147 BTBD19C9JJ37 291 aa13.33□□□□□ -0.28
SPTAN1-220ENST00000630147 HIBADHP31937 336 aaKnown RBP13.33□□□□□ -0.28
SPTAN1-220ENST00000630147 BEND3Q5T5X7 828 aa13.33□□□□□ -0.28
SPTAN1-220ENST00000630147 TDRD7Q8NHU6 1098 aaKnown RBP13.33□□□□□ -0.28
SPTAN1-220ENST00000630147 FAM84BQ96KN1 310 aaPredicted RBP13.33□□□□□ -0.28
SPTAN1-220ENST00000630147 WRNIP1Q96S55 665 aa13.33□□□□□ -0.28
SPTAN1-220ENST00000630147 CPA4Q9UI42 421 aa13.33□□□□□ -0.28
SPTAN1-220ENST00000630147 SERPINA10Q9UK55 444 aa13.33□□□□□ -0.28
SPTAN1-220ENST00000630147 IRF6O14896 467 aa13.32□□□□□ -0.28
SPTAN1-220ENST00000630147 CTGFP29279 349 aa13.32□□□□□ -0.28
SPTAN1-220ENST00000630147 TNNI2P48788 182 aa13.32□□□□□ -0.28
SPTAN1-220ENST00000630147 LACTBP83111 547 aaPredicted RBP13.32□□□□□ -0.28
SPTAN1-220ENST00000630147 EXOSC9Q06265 439 aaKnown RBP13.32□□□□□ -0.28
SPTAN1-220ENST00000630147 SLC4A10Q6U841 1118 aa13.32□□□□□ -0.28
SPTAN1-220ENST00000630147 SHISA4Q96DD7 197 aa13.32□□□□□ -0.28
SPTAN1-220ENST00000630147 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
SPTAN1-220ENST00000630147 RANBP2P49792 3224 aaKnown RBP13.32□□□□□ -0.28
SPTAN1-220ENST00000630147 MYH13Q9UKX3 1938 aa13.31□□□□□ -0.28
SPTAN1-220ENST00000630147 SPDYE5A6NIY4 337 aa13.31□□□□□ -0.28
SPTAN1-220ENST00000630147 GRM8O00222 908 aa13.31□□□□□ -0.28
SPTAN1-220ENST00000630147 VAMP4O75379 141 aa13.31□□□□□ -0.28
SPTAN1-220ENST00000630147 MIGA2Q7L4E1 593 aa13.31□□□□□ -0.28
SPTAN1-220ENST00000630147 DPF3Q92784 378 aa13.31□□□□□ -0.28
SPTAN1-220ENST00000630147 SUCLG2Q96I99 432 aa13.31□□□□□ -0.28
SPTAN1-220ENST00000630147 TLR2O60603 784 aa13.3□□□□□ -0.28
SPTAN1-220ENST00000630147 FRAT2O75474 233 aaPredicted RBP13.3□□□□□ -0.28
SPTAN1-220ENST00000630147 KIF22Q14807 665 aa13.3□□□□□ -0.28
SPTAN1-220ENST00000630147 ARHGEF6Q15052 776 aa13.3□□□□□ -0.28
SPTAN1-220ENST00000630147 VPS37DQ86XT2 251 aa13.3□□□□□ -0.28
SPTAN1-220ENST00000630147 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.3□□□□□ -0.28
SPTAN1-220ENST00000630147 C9orf78Q9NZ63 289 aaPredicted RBP13.3□□□□□ -0.28
SPTAN1-220ENST00000630147 RBM27Q9P2N5 1060 aaKnown RBP13.3□□□□□ -0.28
SPTAN1-220ENST00000630147 CETPP11597 493 aa13.29□□□□□ -0.28
SPTAN1-220ENST00000630147 INPP5BP32019 993 aa13.29□□□□□ -0.28
SPTAN1-220ENST00000630147 SNAPC2Q13487 334 aa13.29□□□□□ -0.28
SPTAN1-220ENST00000630147 LRRC24Q50LG9 513 aa13.29□□□□□ -0.28
SPTAN1-220ENST00000630147 MGAMO43451 1857 aa13.29□□□□□ -0.28
SPTAN1-220ENST00000630147 WDHD1O75717 1129 aaPredicted RBP13.28□□□□□ -0.28
SPTAN1-220ENST00000630147 PSMC4P43686 418 aa13.28□□□□□ -0.28
SPTAN1-220ENST00000630147 UBE4AQ14139 1066 aa13.28□□□□□ -0.28
SPTAN1-220ENST00000630147 CCDC27Q2M243 656 aa13.28□□□□□ -0.28
SPTAN1-220ENST00000630147 ERO1BQ86YB8 467 aa13.28□□□□□ -0.28
SPTAN1-220ENST00000630147 KLHDC4Q8TBB5 520 aa13.28□□□□□ -0.28
SPTAN1-220ENST00000630147 TEKT1Q969V4 418 aa13.28□□□□□ -0.28
SPTAN1-220ENST00000630147 KAZALD1Q96I82 304 aa13.28□□□□□ -0.28
SPTAN1-220ENST00000630147 TRIM47Q96LD4 638 aa13.28□□□□□ -0.28
SPTAN1-220ENST00000630147 FMNL1O95466 1100 aaPredicted RBP13.27□□□□□ -0.29
SPTAN1-220ENST00000630147 NBPF7P0C2Y1 421 aaPredicted RBP13.27□□□□□ -0.29
SPTAN1-220ENST00000630147 OSBPP22059 807 aa13.27□□□□□ -0.29
SPTAN1-220ENST00000630147 BCAMP50895 628 aa13.27□□□□□ -0.29
SPTAN1-220ENST00000630147 TCP10Q12799 353 aa13.27□□□□□ -0.29
SPTAN1-220ENST00000630147 PPIL2Q13356 520 aa13.27□□□□□ -0.29
SPTAN1-220ENST00000630147 METTL24Q5JXM2 366 aa13.27□□□□□ -0.29
SPTAN1-220ENST00000630147 RAET1EQ8TD07 263 aa13.27□□□□□ -0.29
SPTAN1-220ENST00000630147 TMOD2Q9NZR1 351 aa13.27□□□□□ -0.29
SPTAN1-220ENST00000630147 BIN2Q9UBW5 565 aaPredicted RBP13.27□□□□□ -0.29
SPTAN1-220ENST00000630147 MYPNQ86TC9 1320 aa13.27□□□□□ -0.29
SPTAN1-220ENST00000630147 PDHXO00330 501 aa13.26□□□□□ -0.29
SPTAN1-220ENST00000630147 CCL5P13501 91 aa13.26□□□□□ -0.29
SPTAN1-220ENST00000630147 IL16Q14005 1332 aa13.26□□□□□ -0.29
SPTAN1-220ENST00000630147 APOBEC3HQ6NTF7 200 aaKnown RBP13.26□□□□□ -0.29
SPTAN1-220ENST00000630147 C17orf99Q6UX52 265 aa13.26□□□□□ -0.29
SPTAN1-220ENST00000630147 FBXO33Q7Z6M2 555 aa13.26□□□□□ -0.29
SPTAN1-220ENST00000630147 BICC1Q9H694 974 aaKnown RBP13.26□□□□□ -0.29
SPTAN1-220ENST00000630147 SRRDQ9UH36 339 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms