RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 A0A1B0GUL7 405 aa27.63■■■□□ 2.01
SF1-220ENST00000626028 SPDYE2Q495Y8 402 aa27.62■■■□□ 2.01
SF1-220ENST00000626028 CCDC102BQ68D86 513 aa27.62■■■□□ 2.01
SF1-220ENST00000626028 PANK1Q8TE04 598 aa27.62■■■□□ 2.01
SF1-220ENST00000626028 ZDHHC15Q96MV8 337 aa27.62■■■□□ 2.01
SF1-220ENST00000626028 DDX19BQ9UMR2 479 aa27.62■■■□□ 2.01
SF1-220ENST00000626028 MYH2Q9UKX2 1941 aa27.61■■■□□ 2.01
SF1-220ENST00000626028 TIMM10P62072 90 aa27.61■■■□□ 2.01
SF1-220ENST00000626028 HHIPL2Q6UWX4 724 aa27.61■■■□□ 2.01
SF1-220ENST00000626028 ZGPATQ8N5A5 531 aaKnown RBP27.61■■■□□ 2.01
SF1-220ENST00000626028 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.61■■■□□ 2.01
SF1-220ENST00000626028 GPR108Q9NPR9 543 aa27.61■■■□□ 2.01
SF1-220ENST00000626028 NOP58Q9Y2X3 529 aaKnown RBP27.61■■■□□ 2.01
SF1-220ENST00000626028 PHKA1P46020 1223 aa27.6■■■□□ 2.01
SF1-220ENST00000626028 ZNF157P51786 506 aaPredicted RBP27.6■■■□□ 2.01
SF1-220ENST00000626028 GRM1Q13255 1194 aa27.6■■■□□ 2.01
SF1-220ENST00000626028 SUPT20HL1Q3ZLR7 823 aa27.6■■■□□ 2.01
SF1-220ENST00000626028 XAGE2Q96GT9 111 aa27.6■■■□□ 2.01
SF1-220ENST00000626028 BEGAINQ9BUH8 593 aa27.6■■■□□ 2.01
SF1-220ENST00000626028 SCAF8Q9UPN6 1271 aaKnown RBP27.6■■■□□ 2.01
SF1-220ENST00000626028 PCDHAC2Q9Y5I4 1007 aa27.6■■■□□ 2.01
SF1-220ENST00000626028 CA12O43570 354 aa27.59■■■□□ 2.01
SF1-220ENST00000626028 PDE3AQ14432 1141 aa27.59■■■□□ 2.01
SF1-220ENST00000626028 REM2Q8IYK8 340 aaPredicted RBP27.59■■■□□ 2.01
SF1-220ENST00000626028 ZNF70Q9UC06 446 aaPredicted RBP27.59■■■□□ 2.01
SF1-220ENST00000626028 CLRN2A0PK11 232 aa27.58■■■□□ 2.01
SF1-220ENST00000626028 UNCXA6NJT0 531 aa27.58■■■□□ 2.01
SF1-220ENST00000626028 FAM155AB1AL88 458 aaPredicted RBP27.58■■■□□ 2.01
SF1-220ENST00000626028 ADORA1P30542 326 aa27.58■■■□□ 2.01
SF1-220ENST00000626028 CTCFP49711 727 aaPredicted RBP27.58■■■□□ 2.01
SF1-220ENST00000626028 GRIK5Q16478 980 aa27.58■■■□□ 2.01
SF1-220ENST00000626028 PRAMEF18Q5VWM3 479 aa27.58■■■□□ 2.01
SF1-220ENST00000626028 ARMC9Q7Z3E5 817 aa27.58■■■□□ 2.01
SF1-220ENST00000626028 FOXN1O15353 648 aa27.57■■■□□ 2
SF1-220ENST00000626028 SLC10A3P09131 477 aa27.57■■■□□ 2
SF1-220ENST00000626028 TNNI2P48788 182 aa27.57■■■□□ 2
SF1-220ENST00000626028 FKBP1CQ5VVH2 108 aa27.57■■■□□ 2
SF1-220ENST00000626028 TDRD3Q9H7E2 651 aaKnown RBP27.57■■■□□ 2
SF1-220ENST00000626028 C1orf115Q9H7X2 142 aa27.57■■■□□ 2
SF1-220ENST00000626028 VEZTQ9HBM0 779 aa27.57■■■□□ 2
SF1-220ENST00000626028 LAMB1P07942 1786 aa27.57■■■□□ 2
SF1-220ENST00000626028 AOC2O75106 756 aa27.56■■■□□ 2
SF1-220ENST00000626028 SURF6O75683 361 aaKnown RBP27.56■■■□□ 2
SF1-220ENST00000626028 LDHBP07195 334 aaKnown RBP27.56■■■□□ 2
SF1-220ENST00000626028 MAP3K11Q16584 847 aa27.56■■■□□ 2
SF1-220ENST00000626028 CEP85Q6P2H3 762 aa27.56■■■□□ 2
SF1-220ENST00000626028 NEUROD6Q96NK8 337 aa27.56■■■□□ 2
SF1-220ENST00000626028 PRDM10Q9NQV6 1147 aa27.56■■■□□ 2
SF1-220ENST00000626028 PPP1R12BO60237 982 aaPredicted RBP27.55■■■□□ 2
SF1-220ENST00000626028 OS9Q13438 667 aaPredicted RBP27.55■■■□□ 2
SF1-220ENST00000626028 RASGRF1Q13972 1273 aa27.55■■■□□ 2
SF1-220ENST00000626028 TTLL12Q14166 644 aaPredicted RBP27.55■■■□□ 2
SF1-220ENST00000626028 RASA3Q14644 834 aa27.55■■■□□ 2
SF1-220ENST00000626028 GORABQ5T7V8 394 aa27.54■■■□□ 2
SF1-220ENST00000626028 SPTY2D1Q68D10 685 aaPredicted RBP27.54■■■□□ 2
SF1-220ENST00000626028 RPAP2Q8IXW5 612 aaPredicted RBP27.54■■■□□ 2
SF1-220ENST00000626028 ZBTB40Q9NUA8 1239 aa27.54■■■□□ 2
SF1-220ENST00000626028 TMOD2Q9NZR1 351 aa27.54■■■□□ 2
SF1-220ENST00000626028 AOX1Q06278 1338 aa27.53■■■□□ 2
SF1-220ENST00000626028 LDLRAD1Q5T700 205 aa27.53■■■□□ 2
SF1-220ENST00000626028 APOBEC3HQ6NTF7 200 aaKnown RBP27.53■■■□□ 2
SF1-220ENST00000626028 FAM83AQ86UY5 434 aa27.53■■■□□ 2
SF1-220ENST00000626028 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.53■■■□□ 2
SF1-220ENST00000626028 UQCRFS1P1P0C7P4 283 aa27.52■■■□□ 2
SF1-220ENST00000626028 ARID4AP29374 1257 aaPredicted RBP27.52■■■□□ 2
SF1-220ENST00000626028 PRDX5P30044 214 aa27.52■■■□□ 2
SF1-220ENST00000626028 HSP90AB4PQ58FF6 505 aa27.52■■■□□ 2
SF1-220ENST00000626028 RASAL3Q86YV0 1011 aa27.52■■■□□ 2
SF1-220ENST00000626028 ERC1Q8IUD2 1116 aa27.52■■■□□ 2
SF1-220ENST00000626028 SLF2Q8IX21 1173 aa27.52■■■□□ 2
SF1-220ENST00000626028 COG6Q9Y2V7 657 aa27.52■■■□□ 2
SF1-220ENST00000626028 AK9Q5TCS8 1911 aa27.51■■■□□ 2
SF1-220ENST00000626028 UBE2Q2LH0YL09 131 aa27.51■■□□□ 1.99
SF1-220ENST00000626028 TNNI3KQ59H18 835 aa27.51■■□□□ 1.99
SF1-220ENST00000626028 FPGT-TNNI3KV9GXZ4 949 aa27.51■■□□□ 1.99
SF1-220ENST00000626028 SSC5DA1L4H1 1573 aa27.51■■□□□ 1.99
SF1-220ENST00000626028 HMMRO75330 724 aa27.5■■□□□ 1.99
SF1-220ENST00000626028 MOB2Q70IA6 237 aa27.5■■□□□ 1.99
SF1-220ENST00000626028 HOOK2Q96ED9 719 aa27.5■■□□□ 1.99
SF1-220ENST00000626028 ANGEL1Q9UNK9 670 aaKnown RBP27.5■■□□□ 1.99
SF1-220ENST00000626028 IGSF3O75054 1194 aa27.49■■□□□ 1.99
SF1-220ENST00000626028 FAM163AQ96GL9 167 aaPredicted RBP27.49■■□□□ 1.99
SF1-220ENST00000626028 ZNF512BQ96KM6 892 aaPredicted RBP27.49■■□□□ 1.99
SF1-220ENST00000626028 RPAP1Q9BWH6 1393 aaPredicted RBP27.48■■□□□ 1.99
SF1-220ENST00000626028 OTOFQ9HC10 1997 aa27.48■■□□□ 1.99
SF1-220ENST00000626028 NBPF12Q5TAG4 269 aaPredicted RBP27.48■■□□□ 1.99
SF1-220ENST00000626028 COL13A1Q5TAT6 717 aaPredicted RBP27.48■■□□□ 1.99
SF1-220ENST00000626028 SPATA5Q8NB90 893 aa27.48■■□□□ 1.99
SF1-220ENST00000626028 TEPSINQ96N21 525 aa27.48■■□□□ 1.99
SF1-220ENST00000626028 SAGE1Q9NXZ1 904 aa27.48■■□□□ 1.99
SF1-220ENST00000626028 DAGLAQ9Y4D2 1042 aa27.48■■□□□ 1.99
SF1-220ENST00000626028 TCP10L2B9ZVM9 353 aa27.47■■□□□ 1.99
SF1-220ENST00000626028 HSPA8P11142 646 aaKnown RBP27.47■■□□□ 1.99
SF1-220ENST00000626028 IREB2P48200 963 aaKnown RBP27.47■■□□□ 1.99
SF1-220ENST00000626028 KIF23Q02241 960 aaPredicted RBP27.47■■□□□ 1.99
SF1-220ENST00000626028 CCDC158Q5M9N0 1113 aa27.47■■□□□ 1.99
SF1-220ENST00000626028 HMG20BQ9P0W2 317 aa27.47■■□□□ 1.99
SF1-220ENST00000626028 DZIP1Q86YF9 867 aaKnown RBP27.46■■□□□ 1.99
SF1-220ENST00000626028 ABCF2Q9UG63 623 aa27.46■■□□□ 1.99
SF1-220ENST00000626028 GAKO14976 1311 aa27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms