RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CCDC102BQ68D86 513 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 B4GALNT3Q6L9W6 998 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 VPS37DQ86XT2 251 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 SULF1Q8IWU6 871 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 MICALL2Q8IY33 904 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 ZGPATQ8N5A5 531 aaKnown RBP6.44□□□□□ -1.38
SHMT1-211ENST00000618902 HOOK2Q96ED9 719 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 DDRGK1Q96HY6 314 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 NEUROD6Q96NK8 337 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 GNL3LQ9NVN8 582 aaKnown RBP6.44□□□□□ -1.38
SHMT1-211ENST00000618902 ZBTB47Q9UFB7 747 aaPredicted RBP6.44□□□□□ -1.38
SHMT1-211ENST00000618902 SERPINA10Q9UK55 444 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 AKAP2Q9Y2D5 859 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 AKAP11Q9UKA4 1901 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 ASTN2O75129 1339 aaPredicted RBP6.44□□□□□ -1.38
SHMT1-211ENST00000618902 PDS5AQ29RF7 1337 aaKnown RBP6.44□□□□□ -1.38
SHMT1-211ENST00000618902 RAB11FIP3O75154 756 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 MAP4K4O95819 1239 aaPredicted RBP6.43□□□□□ -1.38
SHMT1-211ENST00000618902 MCAMP43121 646 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 TNFAIP1Q13829 316 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 FKBP1CQ5VVH2 108 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 TSHZ3Q63HK5 1081 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 SAMD7Q7Z3H4 446 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 AACSQ86V21 672 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 APOBEC3FQ8IUX4 373 aaKnown RBP6.43□□□□□ -1.38
SHMT1-211ENST00000618902 SMC5Q8IY18 1101 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 ZNF384Q8TF68 577 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 CCDC102AQ96A19 550 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 KIF1BPQ96EK5 621 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 ZBED3Q96IU2 234 aaPredicted RBP6.43□□□□□ -1.38
SHMT1-211ENST00000618902 MYOZ2Q9NPC6 264 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 SNRKQ9NRH2 765 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 HMG20BQ9P0W2 317 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 NDUFB9Q9Y6M9 179 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 SALL3Q9BXA9 1300 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 CNTNAP1P78357 1384 aa6.43□□□□□ -1.38
SHMT1-211ENST00000618902 F8W031 263 aaPredicted RBP6.42□□□□□ -1.38
SHMT1-211ENST00000618902 ARID4AP29374 1257 aaPredicted RBP6.42□□□□□ -1.38
SHMT1-211ENST00000618902 NF2P35240 595 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 KIF4BQ2VIQ3 1234 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 DEFB115Q30KQ5 88 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 HSP90AB4PQ58FF6 505 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 DLK2Q6UY11 383 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 TBC1D9Q6ZT07 1266 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 KRT26Q7Z3Y9 468 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 ERC1Q8IUD2 1116 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 KIAA0825Q8IV33 1275 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 SLF2Q8IX21 1173 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 C2orf69Q8N8R5 385 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 WDR66Q8TBY9 1149 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 FBXW7Q969H0 707 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 EDC3Q96F86 508 aaKnown RBP6.42□□□□□ -1.38
SHMT1-211ENST00000618902 LRRCC1Q9C099 1032 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 BCL11AQ9H165 835 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 TLL2Q9Y6L7 1015 aa6.42□□□□□ -1.38
SHMT1-211ENST00000618902 TRPM7Q96QT4 1865 aa6.41□□□□□ -1.38
SHMT1-211ENST00000618902 MYO5AQ9Y4I1 1855 aaKnown RBP6.41□□□□□ -1.38
SHMT1-211ENST00000618902 POLR2AP24928 1970 aaKnown RBP6.41□□□□□ -1.38
SHMT1-211ENST00000618902 PDE4AP27815 886 aa6.41□□□□□ -1.38
SHMT1-211ENST00000618902 PRDX5P30044 214 aa6.41□□□□□ -1.38
SHMT1-211ENST00000618902 ZAP70P43403 619 aa6.41□□□□□ -1.38
SHMT1-211ENST00000618902 FMR1Q06787 632 aaKnown RBP eCLIP6.41□□□□□ -1.38
SHMT1-211ENST00000618902 NOGQ13253 232 aa6.41□□□□□ -1.38
SHMT1-211ENST00000618902 SUPT20HL1Q3ZLR7 823 aa6.41□□□□□ -1.38
SHMT1-211ENST00000618902 TBC1D10BQ4KMP7 808 aaPredicted RBP6.41□□□□□ -1.38
SHMT1-211ENST00000618902 MFSD14BQ5SR56 506 aa6.41□□□□□ -1.38
SHMT1-211ENST00000618902 MAP1SQ66K74 1059 aaPredicted RBP6.41□□□□□ -1.38
SHMT1-211ENST00000618902 SAPCD2Q86UD0 394 aa6.41□□□□□ -1.38
SHMT1-211ENST00000618902 SKAP1Q86WV1 359 aa6.41□□□□□ -1.38
SHMT1-211ENST00000618902 CERS3Q8IU89 383 aa6.41□□□□□ -1.38
SHMT1-211ENST00000618902 ZNF512BQ96KM6 892 aaPredicted RBP6.41□□□□□ -1.38
SHMT1-211ENST00000618902 ANTXR1Q9H6X2 564 aa6.41□□□□□ -1.38
SHMT1-211ENST00000618902 PIH1D3Q9NQM4 214 aaKnown RBP6.41□□□□□ -1.38
SHMT1-211ENST00000618902 SALL1Q9NSC2 1324 aa6.41□□□□□ -1.38
SHMT1-211ENST00000618902 WNT10BO00744 389 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 PPP1R12BO60237 982 aaPredicted RBP6.4□□□□□ -1.38
SHMT1-211ENST00000618902 FRAT2O75474 233 aaPredicted RBP6.4□□□□□ -1.38
SHMT1-211ENST00000618902 CHGBP05060 677 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 CYP2E1P05181 493 aaPredicted RBP6.4□□□□□ -1.38
SHMT1-211ENST00000618902 TNNI2P48788 182 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 INHBEP58166 350 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 NUCB1Q02818 461 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 DLGAP5Q15398 846 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 DIXDC1Q155Q3 683 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 NBPF9Q3BBW0 867 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 TTC39AQ5SRH9 613 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 GORABQ5T7V8 394 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 RBM26Q5T8P6 1007 aaKnown RBP6.4□□□□□ -1.38
SHMT1-211ENST00000618902 ANKRD45Q5TZF3 282 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 SPTY2D1Q68D10 685 aaPredicted RBP6.4□□□□□ -1.38
SHMT1-211ENST00000618902 HHIPL2Q6UWX4 724 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 CENPQQ7L2Z9 268 aaPredicted RBP6.4□□□□□ -1.38
SHMT1-211ENST00000618902 CLASRPQ8N2M8 674 aaKnown RBP6.4□□□□□ -1.38
SHMT1-211ENST00000618902 SPATA5Q8NB90 893 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 BEGAINQ9BUH8 593 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 LNPKQ9C0E8 428 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 RWDD1Q9H446 243 aaPredicted RBP6.4□□□□□ -1.38
SHMT1-211ENST00000618902 TAOK2Q9UL54 1235 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 DENND2AQ9ULE3 1009 aa6.4□□□□□ -1.38
SHMT1-211ENST00000618902 SCAF8Q9UPN6 1271 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms