RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 RTL9Q8NET4 1388 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 TBC1D8O95759 1140 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 GAS8O95995 478 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 MAP10Q9P2G4 905 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 EIF2B5Q13144 721 aaKnown RBP3.86□□□□□ -1.79
LPP-220ENST00000617246 TRPM7Q96QT4 1865 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 JAKMIP3Q5VZ66 844 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 MSL1Q68DK7 614 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 NLRX1Q86UT6 975 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 NFATC2IPQ8NCF5 419 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 PSMA5P28066 241 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 RIPK4P57078 832 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 IRAK1BP1Q5VVH5 260 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 PAGR1Q9BTK6 254 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 PLCB4Q15147 1175 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 GLT8D2Q9H1C3 349 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 CCDC196A0A1B0GTZ2 297 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 TNPO2O14787 897 aaKnown RBP3.86□□□□□ -1.79
LPP-220ENST00000617246 ATP2B1P20020 1258 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 KIF11P52732 1056 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 SLC10A4Q96EP9 437 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 MCM10Q7L590 875 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 NECTIN2Q92692 538 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 ELF1P32519 619 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 PLCB2Q00722 1185 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 TSPY1Q01534 308 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 JAG2Q9Y219 1238 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 TAF1CQ15572 869 aaPredicted RBP3.86□□□□□ -1.79
LPP-220ENST00000617246 GLIPR1L2Q4G1C9 344 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 RUNDC1Q96C34 613 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 ZFP91Q96JP5 570 aaPredicted RBP3.86□□□□□ -1.79
LPP-220ENST00000617246 TSNARE1Q96NA8 513 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 DENND2AQ9ULE3 1009 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 RNF180Q86T96 592 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 GSDMBQ8TAX9 411 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 RPLP2P05387 115 aaKnown RBP3.86□□□□□ -1.79
LPP-220ENST00000617246 MLLT1Q03111 559 aaPredicted RBP3.86□□□□□ -1.79
LPP-220ENST00000617246 KIF13BQ9NQT8 1826 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 ZMYND10O75800 440 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 FBXL21Q9UKT6 434 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 IQSEC3Q9UPP2 1182 aaPredicted RBP3.86□□□□□ -1.79
LPP-220ENST00000617246 RIMBP2O15034 1052 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 UFL1O94874 794 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 LMNB1P20700 586 aa3.86□□□□□ -1.79
LPP-220ENST00000617246 SNRPA1P09661 255 aaKnown RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 EN1Q05925 392 aaPredicted RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 INTS3Q68E01 1043 aaKnown RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 TEKT1Q969V4 418 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 DAAM2Q86T65 1068 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 ADGRL2O95490 1459 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 DEFB115Q30KQ5 88 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 HMOX1P09601 288 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 CUL4BQ13620 913 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 MCTP2Q6DN12 878 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 NSMCE1Q8WV22 266 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 NSFL1CQ9UNZ2 370 aaKnown RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 LOXHD1Q8IVV2 1947 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 STAMBPO95630 424 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 TMOD1P28289 359 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 PTPROQ16827 1216 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 JPH2Q9BR39 696 aaPredicted RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 RUBCNLQ9H714 662 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 SDHBP21912 280 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 SYNDIG1Q9H7V2 258 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 FAN1Q9Y2M0 1017 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 YARSP54577 528 aaKnown RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 RNASELQ05823 741 aaKnown RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 UPF3BQ9BZI7 483 aaKnown RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 TFRCP02786 760 aaKnown RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 LDHBP07195 334 aaKnown RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 VEGFAP15692 232 aaPredicted RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 PRMT2P55345 433 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 CHRNA2Q15822 529 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 JMYQ8N9B5 988 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 MASTLQ96GX5 879 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 ADPGKQ9BRR6 497 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 SNRKQ9NRH2 765 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 ABCD1P33897 745 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 TMPOP42166 694 aaKnown RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 PKN2Q16513 984 aaKnown RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 ATP2B4P23634 1241 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 CCDC15Q0P6D6 951 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 SRPK1Q96SB4 655 aaKnown RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 KCNH2Q12809 1159 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 ERMNQ8TAM6 284 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 CALML4Q96GE6 196 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 TSG101Q99816 390 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 COL15A1P39059 1388 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 MSCO60682 206 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 CCDC175P0C221 793 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 APBA1Q02410 837 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 VPS50Q96JG6 964 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 ATF7P17544 494 aaPredicted RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 TMEM132EQ6IEE7 984 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 NT5DC4Q86YG4 428 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 EMSYQ7Z589 1322 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 TSPY2A6NKD2 308 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 ECM2O94769 699 aaPredicted RBP3.85□□□□□ -1.79
LPP-220ENST00000617246 ANKRD1Q15327 319 aa3.85□□□□□ -1.79
LPP-220ENST00000617246 VPS72Q15906 364 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms