RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 OS9Q13438 667 aaPredicted RBP27.39■■□□□ 1.98
CBWD3-212ENST00000616550 MVPQ14764 893 aaKnown RBP27.39■■□□□ 1.98
CBWD3-212ENST00000616550 TEKT1Q969V4 418 aa27.39■■□□□ 1.98
CBWD3-212ENST00000616550 XAGE2Q96GT9 111 aa27.39■■□□□ 1.98
CBWD3-212ENST00000616550 MRIQ9BWK5 157 aa27.39■■□□□ 1.98
CBWD3-212ENST00000616550 WBP1LQ9NX94 342 aa27.39■■□□□ 1.98
CBWD3-212ENST00000616550 SURF6O75683 361 aaKnown RBP27.38■■□□□ 1.97
CBWD3-212ENST00000616550 ZNF157P51786 506 aaPredicted RBP27.38■■□□□ 1.97
CBWD3-212ENST00000616550 TTLL12Q14166 644 aaPredicted RBP27.38■■□□□ 1.97
CBWD3-212ENST00000616550 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.38■■□□□ 1.97
CBWD3-212ENST00000616550 CCDC102AQ96A19 550 aa27.38■■□□□ 1.97
CBWD3-212ENST00000616550 PPP2R3BQ9Y5P8 575 aa27.38■■□□□ 1.97
CBWD3-212ENST00000616550 COL1A1P02452 1464 aaPredicted RBP27.38■■□□□ 1.97
CBWD3-212ENST00000616550 PAPPA2Q9BXP8 1791 aa27.37■■□□□ 1.97
CBWD3-212ENST00000616550 TDRD3Q9H7E2 651 aaKnown RBP27.37■■□□□ 1.97
CBWD3-212ENST00000616550 ZNF70Q9UC06 446 aaPredicted RBP27.37■■□□□ 1.97
CBWD3-212ENST00000616550 DDX19BQ9UMR2 479 aa27.37■■□□□ 1.97
CBWD3-212ENST00000616550 COG6Q9Y2V7 657 aa27.37■■□□□ 1.97
CBWD3-212ENST00000616550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.37■■□□□ 1.97
CBWD3-212ENST00000616550 NOGQ13253 232 aa27.36■■□□□ 1.97
CBWD3-212ENST00000616550 TNFAIP1Q13829 316 aa27.36■■□□□ 1.97
CBWD3-212ENST00000616550 SPDYE2Q495Y8 402 aa27.36■■□□□ 1.97
CBWD3-212ENST00000616550 GORABQ5T7V8 394 aa27.36■■□□□ 1.97
CBWD3-212ENST00000616550 BEGAINQ9BUH8 593 aa27.36■■□□□ 1.97
CBWD3-212ENST00000616550 AOX1Q06278 1338 aa27.36■■□□□ 1.97
CBWD3-212ENST00000616550 ZBTB22O15209 634 aa27.35■■□□□ 1.97
CBWD3-212ENST00000616550 CEP85Q6P2H3 762 aa27.35■■□□□ 1.97
CBWD3-212ENST00000616550 CHMP4BQ9H444 224 aaKnown RBP27.35■■□□□ 1.97
CBWD3-212ENST00000616550 THSD7BQ9C0I4 1608 aa27.34■■□□□ 1.97
CBWD3-212ENST00000616550 FOXN1O15353 648 aa27.34■■□□□ 1.97
CBWD3-212ENST00000616550 MOB2Q70IA6 237 aa27.34■■□□□ 1.97
CBWD3-212ENST00000616550 ARMC9Q7Z3E5 817 aa27.34■■□□□ 1.97
CBWD3-212ENST00000616550 ZDHHC15Q96MV8 337 aa27.34■■□□□ 1.97
CBWD3-212ENST00000616550 UBE2Q2LH0YL09 131 aa27.33■■□□□ 1.97
CBWD3-212ENST00000616550 LDHBP07195 334 aaKnown RBP27.33■■□□□ 1.97
CBWD3-212ENST00000616550 RASA3Q14644 834 aa27.33■■□□□ 1.97
CBWD3-212ENST00000616550 SUPT20HL1Q3ZLR7 823 aa27.33■■□□□ 1.97
CBWD3-212ENST00000616550 HHIPL2Q6UWX4 724 aa27.33■■□□□ 1.97
CBWD3-212ENST00000616550 ZGPATQ8N5A5 531 aaKnown RBP27.33■■□□□ 1.97
CBWD3-212ENST00000616550 NOP58Q9Y2X3 529 aaKnown RBP27.33■■□□□ 1.97
CBWD3-212ENST00000616550 SALL1Q9NSC2 1324 aa27.33■■□□□ 1.97
CBWD3-212ENST00000616550 PRKG1Q13976 671 aa27.32■■□□□ 1.96
CBWD3-212ENST00000616550 FAM155AB1AL88 458 aaPredicted RBP27.31■■□□□ 1.96
CBWD3-212ENST00000616550 PRDX5P30044 214 aa27.31■■□□□ 1.96
CBWD3-212ENST00000616550 TNNI2P48788 182 aa27.31■■□□□ 1.96
CBWD3-212ENST00000616550 CTCFP49711 727 aaPredicted RBP27.31■■□□□ 1.96
CBWD3-212ENST00000616550 RASGRF1Q13972 1273 aa27.31■■□□□ 1.96
CBWD3-212ENST00000616550 PDE3AQ14432 1141 aa27.31■■□□□ 1.96
CBWD3-212ENST00000616550 GPR108Q9NPR9 543 aa27.31■■□□□ 1.96
CBWD3-212ENST00000616550 TMOD2Q9NZR1 351 aa27.31■■□□□ 1.96
CBWD3-212ENST00000616550 TCP10L2B9ZVM9 353 aa27.3■■□□□ 1.96
CBWD3-212ENST00000616550 PDS5AQ29RF7 1337 aaKnown RBP27.3■■□□□ 1.96
CBWD3-212ENST00000616550 PPP1R12BO60237 982 aaPredicted RBP27.29■■□□□ 1.96
CBWD3-212ENST00000616550 SLC10A3P09131 477 aa27.29■■□□□ 1.96
CBWD3-212ENST00000616550 TNNI3KQ59H18 835 aa27.29■■□□□ 1.96
CBWD3-212ENST00000616550 APOBEC3HQ6NTF7 200 aaKnown RBP27.29■■□□□ 1.96
CBWD3-212ENST00000616550 ZBTB40Q9NUA8 1239 aa27.29■■□□□ 1.96
CBWD3-212ENST00000616550 ANGEL1Q9UNK9 670 aaKnown RBP27.29■■□□□ 1.96
CBWD3-212ENST00000616550 FPGT-TNNI3KV9GXZ4 949 aa27.29■■□□□ 1.96
CBWD3-212ENST00000616550 NBPF12Q5TAG4 269 aaPredicted RBP27.28■■□□□ 1.96
CBWD3-212ENST00000616550 SPTY2D1Q68D10 685 aaPredicted RBP27.28■■□□□ 1.96
CBWD3-212ENST00000616550 RPAP2Q8IXW5 612 aaPredicted RBP27.28■■□□□ 1.96
CBWD3-212ENST00000616550 YTHDC1Q96MU7 727 aaKnown RBP27.28■■□□□ 1.96
CBWD3-212ENST00000616550 ZIC5Q96T25 663 aa27.28■■□□□ 1.96
CBWD3-212ENST00000616550 ABCF2Q9UG63 623 aa27.28■■□□□ 1.96
CBWD3-212ENST00000616550 UQCRFS1P1P0C7P4 283 aa27.27■■□□□ 1.96
CBWD3-212ENST00000616550 RASAL3Q86YV0 1011 aa27.27■■□□□ 1.96
CBWD3-212ENST00000616550 HMMRO75330 724 aa27.26■■□□□ 1.95
CBWD3-212ENST00000616550 ARID4AP29374 1257 aaPredicted RBP27.26■■□□□ 1.95
CBWD3-212ENST00000616550 KIF23Q02241 960 aaPredicted RBP27.26■■□□□ 1.95
CBWD3-212ENST00000616550 DIXDC1Q155Q3 683 aa27.26■■□□□ 1.95
CBWD3-212ENST00000616550 CCDC158Q5M9N0 1113 aa27.26■■□□□ 1.95
CBWD3-212ENST00000616550 COL13A1Q5TAT6 717 aaPredicted RBP27.26■■□□□ 1.95
CBWD3-212ENST00000616550 C20orf194Q5TEA3 1177 aa27.26■■□□□ 1.95
CBWD3-212ENST00000616550 CACNB3P54284 484 aa27.25■■□□□ 1.95
CBWD3-212ENST00000616550 HSP90AB4PQ58FF6 505 aa27.25■■□□□ 1.95
CBWD3-212ENST00000616550 DZIP1Q86YF9 867 aaKnown RBP27.25■■□□□ 1.95
CBWD3-212ENST00000616550 ERC1Q8IUD2 1116 aa27.25■■□□□ 1.95
CBWD3-212ENST00000616550 SPATA5Q8NB90 893 aa27.25■■□□□ 1.95
CBWD3-212ENST00000616550 HMG20BQ9P0W2 317 aa27.25■■□□□ 1.95
CBWD3-212ENST00000616550 EXOC6BQ9Y2D4 811 aa27.25■■□□□ 1.95
CBWD3-212ENST00000616550 DAGLAQ9Y4D2 1042 aa27.25■■□□□ 1.95
CBWD3-212ENST00000616550 CA12O43570 354 aa27.24■■□□□ 1.95
CBWD3-212ENST00000616550 MAP3K11Q16584 847 aa27.24■■□□□ 1.95
CBWD3-212ENST00000616550 TTC39AQ5SRH9 613 aa27.24■■□□□ 1.95
CBWD3-212ENST00000616550 LDLRAD1Q5T700 205 aa27.24■■□□□ 1.95
CBWD3-212ENST00000616550 FKBP1CQ5VVH2 108 aa27.24■■□□□ 1.95
CBWD3-212ENST00000616550 SLF2Q8IX21 1173 aa27.24■■□□□ 1.95
CBWD3-212ENST00000616550 TMEM39BQ9GZU3 492 aa27.24■■□□□ 1.95
CBWD3-212ENST00000616550 FZD1Q9UP38 647 aa27.24■■□□□ 1.95
CBWD3-212ENST00000616550 MYH2Q9UKX2 1941 aa27.24■■□□□ 1.95
CBWD3-212ENST00000616550 LBX1P52954 281 aa27.23■■□□□ 1.95
CBWD3-212ENST00000616550 ERICH6Q7L0X2 663 aa27.23■■□□□ 1.95
CBWD3-212ENST00000616550 DBNDD2Q9BQY9 259 aa27.23■■□□□ 1.95
CBWD3-212ENST00000616550 PRDM10Q9NQV6 1147 aa27.23■■□□□ 1.95
CBWD3-212ENST00000616550 HSPA8P11142 646 aaKnown RBP27.22■■□□□ 1.95
CBWD3-212ENST00000616550 IREB2P48200 963 aaKnown RBP27.22■■□□□ 1.95
CBWD3-212ENST00000616550 FAM83AQ86UY5 434 aa27.22■■□□□ 1.95
CBWD3-212ENST00000616550 REM2Q8IYK8 340 aaPredicted RBP27.22■■□□□ 1.95
CBWD3-212ENST00000616550 TEPSINQ96N21 525 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms