RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 TMTC1Q8IUR5 882 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 JAKMIP2Q96AA8 810 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 GNAQP50148 359 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 PKP1Q13835 747 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 MLKLQ8NB16 471 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 ARHGEF12Q9NZN5 1544 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 PPFIA1Q13136 1202 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 MTX1Q13505 466 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 CCDC25Q86WR0 208 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 PPFIBP2Q8ND30 876 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 EHMT1Q9H9B1 1298 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 ATP2A1O14983 1001 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 CYP7A1P22680 504 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 SLC4A8Q2Y0W8 1093 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 BUB1BO60566 1050 aaPredicted RBP21.22■□□□□ 0.99
SPAST-203ENST00000615843 MCM7P33993 719 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 SWAP70Q9UH65 585 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 RTL9Q8NET4 1388 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 DAAM2Q86T65 1068 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 CCDC26Q8TAB7 109 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 ADGRL1O94910 1474 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 ATP11AP98196 1134 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 TBC1D8BQ0IIM8 1120 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 TFCP2Q12800 502 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 RILPL1Q5EBL4 403 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 IFT20Q8IY31 132 aa21.22■□□□□ 0.99
SPAST-203ENST00000615843 DTNBO60941 627 aa21.21■□□□□ 0.99
SPAST-203ENST00000615843 CWF19L2Q2TBE0 894 aaKnown RBP21.21■□□□□ 0.99
SPAST-203ENST00000615843 CCDC174Q6PII3 467 aa21.21■□□□□ 0.99
SPAST-203ENST00000615843 INTS8Q75QN2 995 aaKnown RBP21.21■□□□□ 0.99
SPAST-203ENST00000615843 NFE2L3Q9Y4A8 694 aa21.21■□□□□ 0.99
SPAST-203ENST00000615843 CC2D2AQ9P2K1 1620 aa21.21■□□□□ 0.99
SPAST-203ENST00000615843 SYNRGQ9UMZ2 1314 aa21.21■□□□□ 0.99
SPAST-203ENST00000615843 TMEM110-MUSTN1A8MSY1 372 aa21.21■□□□□ 0.99
SPAST-203ENST00000615843 CALM1P0DP23 149 aa21.21■□□□□ 0.99
SPAST-203ENST00000615843 CALM2P0DP24 149 aa21.21■□□□□ 0.99
SPAST-203ENST00000615843 CALM3P0DP25 149 aa21.21■□□□□ 0.99
SPAST-203ENST00000615843 CABS1Q96KC9 395 aa21.21■□□□□ 0.99
SPAST-203ENST00000615843 TMOD2Q9NZR1 351 aa21.21■□□□□ 0.99
SPAST-203ENST00000615843 SARNPP82979 210 aaKnown RBP21.21■□□□□ 0.99
SPAST-203ENST00000615843 TRIM7Q9C029 511 aa21.21■□□□□ 0.99
SPAST-203ENST00000615843 LDHCP07864 332 aa21.2■□□□□ 0.98
SPAST-203ENST00000615843 CABP5Q9NP86 173 aa21.2■□□□□ 0.98
SPAST-203ENST00000615843 PYCARDQ9ULZ3 195 aa21.2■□□□□ 0.98
SPAST-203ENST00000615843 NPC1L1Q9UHC9 1359 aa21.2■□□□□ 0.98
SPAST-203ENST00000615843 BAG3O95817 575 aa21.2■□□□□ 0.98
SPAST-203ENST00000615843 CALCOCO2Q13137 446 aa21.2■□□□□ 0.98
SPAST-203ENST00000615843 SLF2Q8IX21 1173 aa21.2■□□□□ 0.98
SPAST-203ENST00000615843 FERMT2Q96AC1 680 aa21.2■□□□□ 0.98
SPAST-203ENST00000615843 NCOA5Q9HCD5 579 aaKnown RBP21.2■□□□□ 0.98
SPAST-203ENST00000615843 PUS7Q96PZ0 661 aaKnown RBP21.2■□□□□ 0.98
SPAST-203ENST00000615843 SEC62Q99442 399 aaKnown RBP21.2■□□□□ 0.98
SPAST-203ENST00000615843 CDC5LQ99459 802 aaKnown RBP21.2■□□□□ 0.98
SPAST-203ENST00000615843 HELLSQ9NRZ9 838 aa21.2■□□□□ 0.98
SPAST-203ENST00000615843 VWA3AA6NCI4 1184 aa21.2■□□□□ 0.98
SPAST-203ENST00000615843 G2E3Q7L622 706 aa21.2■□□□□ 0.98
SPAST-203ENST00000615843 DTHD1Q6ZMT9 781 aa21.19■□□□□ 0.98
SPAST-203ENST00000615843 SND1Q7KZF4 910 aaKnown RBP eCLIP21.19■□□□□ 0.98
SPAST-203ENST00000615843 GSTA5Q7RTV2 222 aa21.19■□□□□ 0.98
SPAST-203ENST00000615843 NOC4LQ9BVI4 516 aaKnown RBP21.19■□□□□ 0.98
SPAST-203ENST00000615843 CUTAO60888 179 aa21.19■□□□□ 0.98
SPAST-203ENST00000615843 PCK1P35558 622 aa21.19■□□□□ 0.98
SPAST-203ENST00000615843 FBXO31Q5XUX0 539 aaPredicted RBP21.19■□□□□ 0.98
SPAST-203ENST00000615843 NAA16Q6N069 864 aaPredicted RBP21.19■□□□□ 0.98
SPAST-203ENST00000615843 LMNTD2Q8IXW0 634 aa21.19■□□□□ 0.98
SPAST-203ENST00000615843 RGS22Q8NE09 1264 aa21.19■□□□□ 0.98
SPAST-203ENST00000615843 SECISBP2LQ93073 1101 aaKnown RBP21.19■□□□□ 0.98
SPAST-203ENST00000615843 AMOTL2Q9Y2J4 779 aa21.19■□□□□ 0.98
SPAST-203ENST00000615843 NAPAP54920 295 aa21.19■□□□□ 0.98
SPAST-203ENST00000615843 EFCAB8A8MWE9 144 aa21.19■□□□□ 0.98
SPAST-203ENST00000615843 NKIRAS1Q9NYS0 192 aa21.19■□□□□ 0.98
SPAST-203ENST00000615843 LRRC8AQ8IWT6 810 aa21.18■□□□□ 0.98
SPAST-203ENST00000615843 LONRF3Q496Y0 759 aa21.18■□□□□ 0.98
SPAST-203ENST00000615843 KRT79Q5XKE5 535 aa21.18■□□□□ 0.98
SPAST-203ENST00000615843 ZFYVE9O95405 1425 aa21.18■□□□□ 0.98
SPAST-203ENST00000615843 KIAA1524Q8TCG1 905 aa21.18■□□□□ 0.98
SPAST-203ENST00000615843 TSPY3P0CV98 308 aa21.18■□□□□ 0.98
SPAST-203ENST00000615843 TSPY8P0CW00 308 aa21.18■□□□□ 0.98
SPAST-203ENST00000615843 GSPT1P15170 499 aaKnown RBP21.18■□□□□ 0.98
SPAST-203ENST00000615843 KRT9P35527 623 aa21.18■□□□□ 0.98
SPAST-203ENST00000615843 ETF1P62495 437 aaKnown RBP21.18■□□□□ 0.98
SPAST-203ENST00000615843 TRMT1LQ7Z2T5 733 aaKnown RBP21.18■□□□□ 0.98
SPAST-203ENST00000615843 LRRC45Q96CN5 670 aa21.18■□□□□ 0.98
SPAST-203ENST00000615843 POLR2DO15514 142 aaKnown RBP21.17■□□□□ 0.98
SPAST-203ENST00000615843 GIGYF1O75420 1035 aaPredicted RBP21.17■□□□□ 0.98
SPAST-203ENST00000615843 PPP1R7Q15435 360 aa21.17■□□□□ 0.98
SPAST-203ENST00000615843 OTUD7BQ6GQQ9 843 aa21.17■□□□□ 0.98
SPAST-203ENST00000615843 RUFY4Q6ZNE9 571 aa21.17■□□□□ 0.98
SPAST-203ENST00000615843 FAM227BQ96M60 508 aa21.17■□□□□ 0.98
SPAST-203ENST00000615843 TSNARE1Q96NA8 513 aa21.17■□□□□ 0.98
SPAST-203ENST00000615843 PLIN2Q99541 437 aa21.17■□□□□ 0.98
SPAST-203ENST00000615843 MRVI1Q9Y6F6 885 aa21.17■□□□□ 0.98
SPAST-203ENST00000615843 TEX13AQ9BXU3 409 aaPredicted RBP21.17■□□□□ 0.98
SPAST-203ENST00000615843 DNAI2Q9GZS0 605 aa21.17■□□□□ 0.98
SPAST-203ENST00000615843 TRIM35Q9UPQ4 493 aa21.17■□□□□ 0.98
SPAST-203ENST00000615843 FERP16591 822 aa21.17■□□□□ 0.98
SPAST-203ENST00000615843 ALDH3A1P30838 453 aa21.17■□□□□ 0.98
SPAST-203ENST00000615843 PNMA8AQ86V59 439 aaPredicted RBP21.17■□□□□ 0.98
SPAST-203ENST00000615843 GOLGA5Q8TBA6 731 aa21.17■□□□□ 0.98
SPAST-203ENST00000615843 FOXO3O43524 673 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 266.5 ms