RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 KCNQ5Q9NR82 932 aa21.07■□□□□ 0.96
SREK1-216ENST00000612404 NSUN4Q96CB9 384 aaKnown RBP21.07■□□□□ 0.96
SREK1-216ENST00000612404 FER1L6Q2WGJ9 1857 aa21.07■□□□□ 0.96
SREK1-216ENST00000612404 NFKBIEO00221 500 aa21.06■□□□□ 0.96
SREK1-216ENST00000612404 VPS33BQ9H267 617 aa21.06■□□□□ 0.96
SREK1-216ENST00000612404 ARFGEF1Q9Y6D6 1849 aa21.06■□□□□ 0.96
SREK1-216ENST00000612404 GPAA1O43292 621 aa21.05■□□□□ 0.96
SREK1-216ENST00000612404 IARSP41252 1262 aaKnown RBP21.05■□□□□ 0.96
SREK1-216ENST00000612404 GRIK5Q16478 980 aa21.05■□□□□ 0.96
SREK1-216ENST00000612404 AIDAQ96BJ3 306 aa21.05■□□□□ 0.96
SREK1-216ENST00000612404 CCDC88AQ3V6T2 1871 aa21.05■□□□□ 0.96
SREK1-216ENST00000612404 ZNF384Q8TF68 577 aa21.05■□□□□ 0.96
SREK1-216ENST00000612404 MCCP23508 829 aa21.04■□□□□ 0.96
SREK1-216ENST00000612404 RBM25P49756 843 aaKnown RBP21.04■□□□□ 0.96
SREK1-216ENST00000612404 ADGRA1Q86SQ6 560 aa21.04■□□□□ 0.96
SREK1-216ENST00000612404 MIGA1Q8NAN2 632 aa21.04■□□□□ 0.96
SREK1-216ENST00000612404 MXD3Q9BW11 206 aa21.04■□□□□ 0.96
SREK1-216ENST00000612404 VPS53Q5VIR6 699 aa21.04■□□□□ 0.96
SREK1-216ENST00000612404 USP17L3A6NCW0 530 aa21.03■□□□□ 0.96
SREK1-216ENST00000612404 USP17L4A6NCW7 530 aa21.03■□□□□ 0.96
SREK1-216ENST00000612404 EPB41L2O43491 1005 aaKnown RBP21.03■□□□□ 0.96
SREK1-216ENST00000612404 MBD4O95243 580 aa21.03■□□□□ 0.96
SREK1-216ENST00000612404 STRIP1Q5VSL9 837 aa21.03■□□□□ 0.96
SREK1-216ENST00000612404 USP17L1Q7RTZ2 530 aa21.03■□□□□ 0.96
SREK1-216ENST00000612404 NIM1KQ8IY84 436 aa21.03■□□□□ 0.96
SREK1-216ENST00000612404 SCN9AQ15858 1988 aa21.03■□□□□ 0.96
SREK1-216ENST00000612404 MAST2Q6P0Q8 1798 aa21.03■□□□□ 0.96
SREK1-216ENST00000612404 YDJCA8MPS7 323 aa21.02■□□□□ 0.96
SREK1-216ENST00000612404 RASSF7Q02833 373 aa21.02■□□□□ 0.96
SREK1-216ENST00000612404 MAP4K1Q92918 833 aa21.02■□□□□ 0.96
SREK1-216ENST00000612404 GSTO1P78417 241 aa21.02■□□□□ 0.96
SREK1-216ENST00000612404 CERS5Q8N5B7 392 aa21.02■□□□□ 0.96
SREK1-216ENST00000612404 ARMT1Q9H993 441 aa21.02■□□□□ 0.96
SREK1-216ENST00000612404 COL4A5P29400 1685 aa21.01■□□□□ 0.95
SREK1-216ENST00000612404 MAGEB6P1A0A0J9YX57 407 aa21.01■□□□□ 0.95
SREK1-216ENST00000612404 F8W031 263 aaPredicted RBP21.01■□□□□ 0.95
SREK1-216ENST00000612404 HSPD1P10809 573 aaKnown RBP21.01■□□□□ 0.95
SREK1-216ENST00000612404 DIXDC1Q155Q3 683 aa21.01■□□□□ 0.95
SREK1-216ENST00000612404 RBM8AQ9Y5S9 174 aaKnown RBP21.01■□□□□ 0.95
SREK1-216ENST00000612404 IGSF3O75054 1194 aa21.01■□□□□ 0.95
SREK1-216ENST00000612404 TMED8Q6PL24 325 aaPredicted RBP21.01■□□□□ 0.95
SREK1-216ENST00000612404 ARHGAP27Q6ZUM4 889 aa21.01■□□□□ 0.95
SREK1-216ENST00000612404 LCORLQ8N3X6 602 aa21.01■□□□□ 0.95
SREK1-216ENST00000612404 JDP2Q8WYK2 163 aa21.01■□□□□ 0.95
SREK1-216ENST00000612404 LTBP3Q9NS15 1303 aa21■□□□□ 0.95
SREK1-216ENST00000612404 DACT2Q5SW24 774 aa21■□□□□ 0.95
SREK1-216ENST00000612404 STRBPQ96SI9 672 aaKnown RBP21■□□□□ 0.95
SREK1-216ENST00000612404 DSCC1Q9BVC3 393 aa21■□□□□ 0.95
SREK1-216ENST00000612404 ZNRF3Q9ULT6 936 aa21■□□□□ 0.95
SREK1-216ENST00000612404 SUGT1Q9Y2Z0 365 aa21■□□□□ 0.95
SREK1-216ENST00000612404 RAD17O75943 681 aa20.99■□□□□ 0.95
SREK1-216ENST00000612404 HSPA4P34932 840 aa20.99■□□□□ 0.95
SREK1-216ENST00000612404 APPP05067 770 aa20.99■□□□□ 0.95
SREK1-216ENST00000612404 ANP32AP39687 249 aaKnown RBP20.99■□□□□ 0.95
SREK1-216ENST00000612404 DYNLL1P63167 89 aaKnown RBP20.99■□□□□ 0.95
SREK1-216ENST00000612404 AATFQ9NY61 560 aaKnown RBP eCLIP20.99■□□□□ 0.95
SREK1-216ENST00000612404 TTF2Q9UNY4 1162 aaKnown RBP20.99■□□□□ 0.95
SREK1-216ENST00000612404 U3KPZ7 1027 aaPredicted RBP20.99■□□□□ 0.95
SREK1-216ENST00000612404 LDHCP07864 332 aa20.98■□□□□ 0.95
SREK1-216ENST00000612404 SLF2Q8IX21 1173 aa20.98■□□□□ 0.95
SREK1-216ENST00000612404 PALD1Q9ULE6 856 aa20.98■□□□□ 0.95
SREK1-216ENST00000612404 FKBP1AP62942 108 aaKnown RBP20.98■□□□□ 0.95
SREK1-216ENST00000612404 RIOK1Q9BRS2 568 aaKnown RBP20.98■□□□□ 0.95
SREK1-216ENST00000612404 MYH2Q9UKX2 1941 aa20.97■□□□□ 0.95
SREK1-216ENST00000612404 NECTIN1Q15223 517 aa20.97■□□□□ 0.95
SREK1-216ENST00000612404 KIAA0825Q8IV33 1275 aa20.97■□□□□ 0.95
SREK1-216ENST00000612404 NOL10Q9BSC4 688 aaKnown RBP20.97■□□□□ 0.95
SREK1-216ENST00000612404 SLC4A4Q9Y6R1 1079 aa20.97■□□□□ 0.95
SREK1-216ENST00000612404 MROH7-TTC4A0A0A0MT08 1334 aa20.97■□□□□ 0.95
SREK1-216ENST00000612404 FOXP2O15409 715 aa20.96■□□□□ 0.95
SREK1-216ENST00000612404 GNAT2P19087 354 aa20.96■□□□□ 0.95
SREK1-216ENST00000612404 CREB3L3Q68CJ9 461 aa20.96■□□□□ 0.95
SREK1-216ENST00000612404 PSMD14O00487 310 aa20.96■□□□□ 0.95
SREK1-216ENST00000612404 PRKAB2O43741 272 aa20.96■□□□□ 0.95
SREK1-216ENST00000612404 SCNN1DP51172 638 aa20.96■□□□□ 0.95
SREK1-216ENST00000612404 KIF2CQ99661 725 aa20.96■□□□□ 0.95
SREK1-216ENST00000612404 BAG3O95817 575 aa20.95■□□□□ 0.94
SREK1-216ENST00000612404 YBX3P16989 372 aaKnown RBP eCLIP20.95■□□□□ 0.94
SREK1-216ENST00000612404 PRELPP51888 382 aa20.95■□□□□ 0.94
SREK1-216ENST00000612404 RNF20Q5VTR2 975 aa20.95■□□□□ 0.94
SREK1-216ENST00000612404 ZNF646O15015 1829 aaPredicted RBP20.95■□□□□ 0.94
SREK1-216ENST00000612404 PATL2C9JE40 543 aaKnown RBP20.95■□□□□ 0.94
SREK1-216ENST00000612404 SLC27A2O14975 620 aa20.95■□□□□ 0.94
SREK1-216ENST00000612404 ZKSCAN1P17029 563 aaPredicted RBP20.95■□□□□ 0.94
SREK1-216ENST00000612404 PSME4Q14997 1843 aa20.94■□□□□ 0.94
SREK1-216ENST00000612404 FGAP02671 866 aa20.94■□□□□ 0.94
SREK1-216ENST00000612404 ANAPC15P60006 121 aa20.94■□□□□ 0.94
SREK1-216ENST00000612404 RSBN1LQ6PCB5 846 aaPredicted RBP20.94■□□□□ 0.94
SREK1-216ENST00000612404 RASEFQ8IZ41 740 aa20.94■□□□□ 0.94
SREK1-216ENST00000612404 CTNNA3Q9UI47 895 aa20.94■□□□□ 0.94
SREK1-216ENST00000612404 SNX14Q9Y5W7 946 aa20.94■□□□□ 0.94
SREK1-216ENST00000612404 VIL1P09327 827 aaKnown RBP20.93■□□□□ 0.94
SREK1-216ENST00000612404 BTDP43251 543 aa20.93■□□□□ 0.94
SREK1-216ENST00000612404 CXCL9Q07325 125 aa20.93■□□□□ 0.94
SREK1-216ENST00000612404 SDR42E1Q8WUS8 393 aa20.93■□□□□ 0.94
SREK1-216ENST00000612404 CRNKL1Q9BZJ0 848 aaKnown RBP20.93■□□□□ 0.94
SREK1-216ENST00000612404 GSG1L2A8MUP6 293 aa20.93■□□□□ 0.94
SREK1-216ENST00000612404 FAM163AQ96GL9 167 aaPredicted RBP20.93■□□□□ 0.94
SREK1-216ENST00000612404 NACAP1Q9BZK3 213 aa20.93■□□□□ 0.94
SREK1-216ENST00000612404 DAGLAQ9Y4D2 1042 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms