RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TTLL12Q14166 644 aaPredicted RBP17.79■□□□□ 0.44
TUBE1-208ENST00000604743 TDRD3Q9H7E2 651 aaKnown RBP17.79■□□□□ 0.44
TUBE1-208ENST00000604743 DENND2AQ9ULE3 1009 aa17.79■□□□□ 0.44
TUBE1-208ENST00000604743 AOC2O75106 756 aa17.78■□□□□ 0.44
TUBE1-208ENST00000604743 NF2P35240 595 aa17.78■□□□□ 0.44
TUBE1-208ENST00000604743 PRKG1Q13976 671 aa17.78■□□□□ 0.44
TUBE1-208ENST00000604743 MOB2Q70IA6 237 aa17.78■□□□□ 0.44
TUBE1-208ENST00000604743 TEKT1Q969V4 418 aa17.78■□□□□ 0.44
TUBE1-208ENST00000604743 DEFB129Q9H1M3 183 aa17.78■□□□□ 0.44
TUBE1-208ENST00000604743 SEMA3EO15041 775 aa17.77■□□□□ 0.44
TUBE1-208ENST00000604743 PDE3AQ14432 1141 aa17.77■□□□□ 0.44
TUBE1-208ENST00000604743 ZBTB40Q9NUA8 1239 aa17.77■□□□□ 0.44
TUBE1-208ENST00000604743 ZNF70Q9UC06 446 aaPredicted RBP17.77■□□□□ 0.44
TUBE1-208ENST00000604743 EXOC6BQ9Y2D4 811 aa17.77■□□□□ 0.44
TUBE1-208ENST00000604743 MAST3O60307 1309 aa17.76■□□□□ 0.43
TUBE1-208ENST00000604743 PRDX5P30044 214 aa17.76■□□□□ 0.43
TUBE1-208ENST00000604743 HDLBPQ00341 1268 aaKnown RBP17.76■□□□□ 0.43
TUBE1-208ENST00000604743 RASGRF1Q13972 1273 aa17.76■□□□□ 0.43
TUBE1-208ENST00000604743 RGMBQ6NW40 437 aa17.76■□□□□ 0.43
TUBE1-208ENST00000604743 HHIPL1Q96JK4 782 aa17.76■□□□□ 0.43
TUBE1-208ENST00000604743 CHMP4BQ9H444 224 aaKnown RBP17.76■□□□□ 0.43
TUBE1-208ENST00000604743 NOP58Q9Y2X3 529 aaKnown RBP17.76■□□□□ 0.43
TUBE1-208ENST00000604743 SUGT1Q9Y2Z0 365 aa17.76■□□□□ 0.43
TUBE1-208ENST00000604743 MYH2Q9UKX2 1941 aa17.76■□□□□ 0.43
TUBE1-208ENST00000604743 PAPPA2Q9BXP8 1791 aa17.76■□□□□ 0.43
TUBE1-208ENST00000604743 TCP10L2B9ZVM9 353 aa17.75■□□□□ 0.43
TUBE1-208ENST00000604743 UBE2Q2LH0YL09 131 aa17.75■□□□□ 0.43
TUBE1-208ENST00000604743 LDHBP07195 334 aaKnown RBP17.75■□□□□ 0.43
TUBE1-208ENST00000604743 ZNF157P51786 506 aaPredicted RBP17.75■□□□□ 0.43
TUBE1-208ENST00000604743 SPDYE2Q495Y8 402 aa17.75■□□□□ 0.43
TUBE1-208ENST00000604743 TNNI3KQ59H18 835 aa17.75■□□□□ 0.43
TUBE1-208ENST00000604743 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.75■□□□□ 0.43
TUBE1-208ENST00000604743 ABCF2Q9UG63 623 aa17.75■□□□□ 0.43
TUBE1-208ENST00000604743 FZD1Q9UP38 647 aa17.75■□□□□ 0.43
TUBE1-208ENST00000604743 FPGT-TNNI3KV9GXZ4 949 aa17.75■□□□□ 0.43
TUBE1-208ENST00000604743 APBB1O00213 710 aa17.74■□□□□ 0.43
TUBE1-208ENST00000604743 CACNB3P54284 484 aa17.74■□□□□ 0.43
TUBE1-208ENST00000604743 RASA3Q14644 834 aa17.74■□□□□ 0.43
TUBE1-208ENST00000604743 AIDAQ96BJ3 306 aa17.74■□□□□ 0.43
TUBE1-208ENST00000604743 DBNDD2Q9BQY9 259 aa17.74■□□□□ 0.43
TUBE1-208ENST00000604743 BCL11AQ9H165 835 aa17.74■□□□□ 0.43
TUBE1-208ENST00000604743 AK9Q5TCS8 1911 aa17.74■□□□□ 0.43
TUBE1-208ENST00000604743 FKBP1BP68106 108 aa17.73■□□□□ 0.43
TUBE1-208ENST00000604743 TNFAIP1Q13829 316 aa17.73■□□□□ 0.43
TUBE1-208ENST00000604743 DIXDC1Q155Q3 683 aa17.73■□□□□ 0.43
TUBE1-208ENST00000604743 TTC39AQ5SRH9 613 aa17.73■□□□□ 0.43
TUBE1-208ENST00000604743 HHIPL2Q6UWX4 724 aa17.73■□□□□ 0.43
TUBE1-208ENST00000604743 PI16Q6UXB8 463 aa17.73■□□□□ 0.43
TUBE1-208ENST00000604743 RPAP2Q8IXW5 612 aaPredicted RBP17.73■□□□□ 0.43
TUBE1-208ENST00000604743 ZDHHC15Q96MV8 337 aa17.73■□□□□ 0.43
TUBE1-208ENST00000604743 MRIQ9BWK5 157 aa17.73■□□□□ 0.43
TUBE1-208ENST00000604743 CCDC8Q9H0W5 538 aaPredicted RBP17.73■□□□□ 0.43
TUBE1-208ENST00000604743 GPR108Q9NPR9 543 aa17.73■□□□□ 0.43
TUBE1-208ENST00000604743 SALL1Q9NSC2 1324 aa17.72■□□□□ 0.43
TUBE1-208ENST00000604743 HMMRO75330 724 aa17.72■□□□□ 0.43
TUBE1-208ENST00000604743 MAP2K1Q02750 393 aaPredicted RBP17.72■□□□□ 0.43
TUBE1-208ENST00000604743 CCDC158Q5M9N0 1113 aa17.72■□□□□ 0.43
TUBE1-208ENST00000604743 NBPF12Q5TAG4 269 aaPredicted RBP17.72■□□□□ 0.43
TUBE1-208ENST00000604743 APOBEC3HQ6NTF7 200 aaKnown RBP17.72■□□□□ 0.43
TUBE1-208ENST00000604743 ARMC9Q7Z3E5 817 aa17.72■□□□□ 0.43
TUBE1-208ENST00000604743 ZGPATQ8N5A5 531 aaKnown RBP17.72■□□□□ 0.43
TUBE1-208ENST00000604743 SPATA5Q8NB90 893 aa17.72■□□□□ 0.43
TUBE1-208ENST00000604743 ZIC5Q96T25 663 aa17.72■□□□□ 0.43
TUBE1-208ENST00000604743 TMOD2Q9NZR1 351 aa17.72■□□□□ 0.43
TUBE1-208ENST00000604743 HMG20BQ9P0W2 317 aa17.72■□□□□ 0.43
TUBE1-208ENST00000604743 ANGEL1Q9UNK9 670 aaKnown RBP17.72■□□□□ 0.43
TUBE1-208ENST00000604743 PPP2R3BQ9Y5P8 575 aa17.72■□□□□ 0.43
TUBE1-208ENST00000604743 FOXN1O15353 648 aa17.71■□□□□ 0.43
TUBE1-208ENST00000604743 UQCRFS1P1P0C7P4 283 aa17.71■□□□□ 0.43
TUBE1-208ENST00000604743 ARID4AP29374 1257 aaPredicted RBP17.71■□□□□ 0.43
TUBE1-208ENST00000604743 MAP2K2P36507 400 aa17.71■□□□□ 0.43
TUBE1-208ENST00000604743 TNNI2P48788 182 aa17.71■□□□□ 0.43
TUBE1-208ENST00000604743 SUPT20HL1Q3ZLR7 823 aa17.71■□□□□ 0.43
TUBE1-208ENST00000604743 TBC1D9Q6ZT07 1266 aa17.71■□□□□ 0.43
TUBE1-208ENST00000604743 DZIP1Q86YF9 867 aaKnown RBP17.71■□□□□ 0.43
TUBE1-208ENST00000604743 ERC1Q8IUD2 1116 aa17.71■□□□□ 0.43
TUBE1-208ENST00000604743 SIRT2Q8IXJ6 389 aa17.71■□□□□ 0.43
TUBE1-208ENST00000604743 CCDC102AQ96A19 550 aa17.71■□□□□ 0.43
TUBE1-208ENST00000604743 SNRKQ9NRH2 765 aa17.71■□□□□ 0.43
TUBE1-208ENST00000604743 WBP1LQ9NX94 342 aa17.71■□□□□ 0.43
TUBE1-208ENST00000604743 DAGLAQ9Y4D2 1042 aa17.71■□□□□ 0.43
TUBE1-208ENST00000604743 THSD7BQ9C0I4 1608 aa17.7■□□□□ 0.42
TUBE1-208ENST00000604743 MCAMP43121 646 aa17.7■□□□□ 0.42
TUBE1-208ENST00000604743 NOGQ13253 232 aa17.7■□□□□ 0.42
TUBE1-208ENST00000604743 HSP90AB4PQ58FF6 505 aa17.7■□□□□ 0.42
TUBE1-208ENST00000604743 SPTY2D1Q68D10 685 aaPredicted RBP17.7■□□□□ 0.42
TUBE1-208ENST00000604743 ERICH6Q7L0X2 663 aa17.7■□□□□ 0.42
TUBE1-208ENST00000604743 EAF2Q96CJ1 260 aaPredicted RBP17.7■□□□□ 0.42
TUBE1-208ENST00000604743 BEGAINQ9BUH8 593 aa17.7■□□□□ 0.42
TUBE1-208ENST00000604743 TMEM39BQ9GZU3 492 aa17.7■□□□□ 0.42
TUBE1-208ENST00000604743 IL1RAPL2Q9NP60 686 aa17.7■□□□□ 0.42
TUBE1-208ENST00000604743 TLR7Q9NYK1 1049 aaKnown RBP17.7■□□□□ 0.42
TUBE1-208ENST00000604743 AKAP11Q9UKA4 1901 aa17.7■□□□□ 0.42
TUBE1-208ENST00000604743 PDS5AQ29RF7 1337 aaKnown RBP17.7■□□□□ 0.42
TUBE1-208ENST00000604743 MYO5AQ9Y4I1 1855 aaKnown RBP17.69■□□□□ 0.42
TUBE1-208ENST00000604743 FAM155AB1AL88 458 aaPredicted RBP17.69■□□□□ 0.42
TUBE1-208ENST00000604743 RRP1P56182 461 aaKnown RBP17.69■□□□□ 0.42
TUBE1-208ENST00000604743 CDAN1Q8IWY9 1227 aa17.69■□□□□ 0.42
TUBE1-208ENST00000604743 RHPN1Q8TCX5 695 aa17.69■□□□□ 0.42
TUBE1-208ENST00000604743 DBNLQ9UJU6 430 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms