RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 TCRBV5S4A2TA0A5A2 114 aa22.32■■□□□ 1.16
SSBP4-212ENST00000601919 LDHCP07864 332 aa22.32■■□□□ 1.16
SSBP4-212ENST00000601919 CYP7A1P22680 504 aa22.32■■□□□ 1.16
SSBP4-212ENST00000601919 PRDX5P30044 214 aa22.32■■□□□ 1.16
SSBP4-212ENST00000601919 MECOMQ03112 1051 aa22.32■■□□□ 1.16
SSBP4-212ENST00000601919 NSUN4Q96CB9 384 aaKnown RBP22.32■■□□□ 1.16
SSBP4-212ENST00000601919 SCN9AQ15858 1988 aa22.32■■□□□ 1.16
SSBP4-212ENST00000601919 CCDC171Q6TFL3 1326 aa22.31■■□□□ 1.16
SSBP4-212ENST00000601919 OSBP2Q969R2 916 aa22.31■■□□□ 1.16
SSBP4-212ENST00000601919 MYO3BQ8WXR4 1341 aa22.31■■□□□ 1.16
SSBP4-212ENST00000601919 AIDAQ96BJ3 306 aa22.3■■□□□ 1.16
SSBP4-212ENST00000601919 MYH2Q9UKX2 1941 aa22.29■■□□□ 1.16
SSBP4-212ENST00000601919 YDJCA8MPS7 323 aa22.29■■□□□ 1.16
SSBP4-212ENST00000601919 CHGBP05060 677 aa22.29■■□□□ 1.16
SSBP4-212ENST00000601919 MCCP23508 829 aa22.29■■□□□ 1.16
SSBP4-212ENST00000601919 RASSF7Q02833 373 aa22.29■■□□□ 1.16
SSBP4-212ENST00000601919 DACT2Q5SW24 774 aa22.29■■□□□ 1.16
SSBP4-212ENST00000601919 CERS3Q8IU89 383 aa22.29■■□□□ 1.16
SSBP4-212ENST00000601919 SEC62Q99442 399 aaKnown RBP22.29■■□□□ 1.16
SSBP4-212ENST00000601919 NOL10Q9BSC4 688 aaKnown RBP22.29■■□□□ 1.16
SSBP4-212ENST00000601919 USP26Q9BXU7 913 aa22.29■■□□□ 1.16
SSBP4-212ENST00000601919 DICER1Q9UPY3 1922 aaKnown RBP22.28■■□□□ 1.16
SSBP4-212ENST00000601919 M0R2C6 588 aa22.28■■□□□ 1.16
SSBP4-212ENST00000601919 GPAA1O43292 621 aa22.28■■□□□ 1.16
SSBP4-212ENST00000601919 LMNB1P20700 586 aa22.28■■□□□ 1.16
SSBP4-212ENST00000601919 SLFNL1Q499Z3 407 aa22.28■■□□□ 1.16
SSBP4-212ENST00000601919 ZNF589Q86UQ0 364 aaPredicted RBP22.28■■□□□ 1.16
SSBP4-212ENST00000601919 C22orf23Q9BZE7 217 aa22.28■■□□□ 1.16
SSBP4-212ENST00000601919 PUS7LQ9H0K6 701 aaKnown RBP22.28■■□□□ 1.16
SSBP4-212ENST00000601919 IL25Q9H293 177 aa22.28■■□□□ 1.16
SSBP4-212ENST00000601919 ZNF646O15015 1829 aaPredicted RBP22.27■■□□□ 1.16
SSBP4-212ENST00000601919 MAGEB6P1A0A0J9YX57 407 aa22.27■■□□□ 1.16
SSBP4-212ENST00000601919 GNAT2P19087 354 aa22.27■■□□□ 1.16
SSBP4-212ENST00000601919 TNIP1Q15025 636 aa22.27■■□□□ 1.16
SSBP4-212ENST00000601919 LSG1Q9H089 658 aaKnown RBP22.27■■□□□ 1.16
SSBP4-212ENST00000601919 KCNQ5Q9NR82 932 aa22.27■■□□□ 1.16
SSBP4-212ENST00000601919 COL4A5P29400 1685 aa22.26■■□□□ 1.15
SSBP4-212ENST00000601919 BAG3O95817 575 aa22.26■■□□□ 1.15
SSBP4-212ENST00000601919 CCDC129Q6ZRS4 1044 aa22.26■■□□□ 1.15
SSBP4-212ENST00000601919 DSCC1Q9BVC3 393 aa22.26■■□□□ 1.15
SSBP4-212ENST00000601919 TSHZ2Q9NRE2 1034 aa22.26■■□□□ 1.15
SSBP4-212ENST00000601919 TTF2Q9UNY4 1162 aaKnown RBP22.26■■□□□ 1.15
SSBP4-212ENST00000601919 SBF1O95248 1867 aa22.26■■□□□ 1.15
SSBP4-212ENST00000601919 MBD4O95243 580 aa22.25■■□□□ 1.15
SSBP4-212ENST00000601919 VIL1P09327 827 aaKnown RBP22.25■■□□□ 1.15
SSBP4-212ENST00000601919 YBX3P16989 372 aaKnown RBP eCLIP22.25■■□□□ 1.153e-6■■□□□ 12.9
SSBP4-212ENST00000601919 EIF6P56537 245 aaKnown RBP22.25■■□□□ 1.15
SSBP4-212ENST00000601919 GPR162Q16538 588 aa22.25■■□□□ 1.15
SSBP4-212ENST00000601919 CIAPIN1Q6FI81 312 aa22.25■■□□□ 1.15
SSBP4-212ENST00000601919 RSBN1LQ6PCB5 846 aaPredicted RBP22.25■■□□□ 1.15
SSBP4-212ENST00000601919 CERS5Q8N5B7 392 aa22.25■■□□□ 1.15
SSBP4-212ENST00000601919 FAM163AQ96GL9 167 aaPredicted RBP22.25■■□□□ 1.15
SSBP4-212ENST00000601919 TBC1D32Q96NH3 1257 aa22.25■■□□□ 1.15
SSBP4-212ENST00000601919 MRIQ9BWK5 157 aa22.25■■□□□ 1.15
SSBP4-212ENST00000601919 MROH7-TTC4A0A0A0MT08 1334 aa22.25■■□□□ 1.15
SSBP4-212ENST00000601919 RPAP1Q9BWH6 1393 aaPredicted RBP22.25■■□□□ 1.15
SSBP4-212ENST00000601919 GRIN3BO60391 1043 aa22.24■■□□□ 1.15
SSBP4-212ENST00000601919 RAD17O75943 681 aa22.24■■□□□ 1.15
SSBP4-212ENST00000601919 PLCG2P16885 1265 aa22.24■■□□□ 1.15
SSBP4-212ENST00000601919 HDLBPQ00341 1268 aaKnown RBP22.24■■□□□ 1.15
SSBP4-212ENST00000601919 GRIK5Q16478 980 aa22.24■■□□□ 1.15
SSBP4-212ENST00000601919 ZNF384Q8TF68 577 aa22.24■■□□□ 1.15
SSBP4-212ENST00000601919 MAP4K1Q92918 833 aa22.24■■□□□ 1.15
SSBP4-212ENST00000601919 STRBPQ96SI9 672 aaKnown RBP22.24■■□□□ 1.15
SSBP4-212ENST00000601919 U3KPZ7 1027 aaPredicted RBP22.24■■□□□ 1.15
SSBP4-212ENST00000601919 PSMD14O00487 310 aa22.23■■□□□ 1.15
SSBP4-212ENST00000601919 HSPD1P10809 573 aaKnown RBP22.23■■□□□ 1.15
SSBP4-212ENST00000601919 RBM25P49756 843 aaKnown RBP22.23■■□□□ 1.15
SSBP4-212ENST00000601919 PTH1RQ03431 593 aa22.23■■□□□ 1.15
SSBP4-212ENST00000601919 CXCL9Q07325 125 aa22.23■■□□□ 1.15
SSBP4-212ENST00000601919 MIGA1Q8NAN2 632 aa22.23■■□□□ 1.15
SSBP4-212ENST00000601919 AGBL3Q8NEM8 1001 aa22.23■■□□□ 1.15
SSBP4-212ENST00000601919 TEKT1Q969V4 418 aa22.23■■□□□ 1.15
SSBP4-212ENST00000601919 MXD3Q9BW11 206 aa22.23■■□□□ 1.15
SSBP4-212ENST00000601919 CTNNA3Q9UI47 895 aa22.23■■□□□ 1.15
SSBP4-212ENST00000601919 F8W031 263 aaPredicted RBP22.22■■□□□ 1.15
SSBP4-212ENST00000601919 FZD9O00144 591 aa22.22■■□□□ 1.15
SSBP4-212ENST00000601919 MMP14P50281 582 aa22.22■■□□□ 1.15
SSBP4-212ENST00000601919 DIXDC1Q155Q3 683 aa22.22■■□□□ 1.15
SSBP4-212ENST00000601919 RNF20Q5VTR2 975 aa22.22■■□□□ 1.15
SSBP4-212ENST00000601919 HHIPL2Q6UWX4 724 aa22.22■■□□□ 1.15
SSBP4-212ENST00000601919 ADGRA1Q86SQ6 560 aa22.22■■□□□ 1.15
SSBP4-212ENST00000601919 NACAP1Q9BZK3 213 aa22.22■■□□□ 1.15
SSBP4-212ENST00000601919 ARMT1Q9H993 441 aa22.22■■□□□ 1.15
SSBP4-212ENST00000601919 HDAC9Q9UKV0 1011 aa22.22■■□□□ 1.15
SSBP4-212ENST00000601919 GAKO14976 1311 aa22.22■■□□□ 1.15
SSBP4-212ENST00000601919 PATL2C9JE40 543 aaKnown RBP22.21■■□□□ 1.15
SSBP4-212ENST00000601919 PPP4CP60510 307 aa22.21■■□□□ 1.15
SSBP4-212ENST00000601919 KIAA0825Q8IV33 1275 aa22.21■■□□□ 1.15
SSBP4-212ENST00000601919 LCORLQ8N3X6 602 aa22.21■■□□□ 1.15
SSBP4-212ENST00000601919 RIOK1Q9BRS2 568 aaKnown RBP22.21■■□□□ 1.15
SSBP4-212ENST00000601919 CRNKL1Q9BZJ0 848 aaKnown RBP22.21■■□□□ 1.15
SSBP4-212ENST00000601919 AATFQ9NY61 560 aaKnown RBP eCLIP22.21■■□□□ 1.15
SSBP4-212ENST00000601919 SERPINA10Q9UK55 444 aa22.21■■□□□ 1.15
SSBP4-212ENST00000601919 RBM8AQ9Y5S9 174 aaKnown RBP22.21■■□□□ 1.15
SSBP4-212ENST00000601919 GPR75-ASB3A0A0A6YYF3 556 aa22.2■■□□□ 1.14
SSBP4-212ENST00000601919 APPP05067 770 aa22.2■■□□□ 1.14
SSBP4-212ENST00000601919 RPS12P25398 132 aaKnown RBP22.2■■□□□ 1.14
SSBP4-212ENST00000601919 HSPA4P34932 840 aa22.2■■□□□ 1.14
SSBP4-212ENST00000601919 OGFOD1Q8N543 542 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms