RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 TTLL11Q8NHH1 800 aa23.56■■□□□ 1.36
SHKBP1-225ENST00000600733 CCDC94Q9BW85 323 aaPredicted RBP23.56■■□□□ 1.36
SHKBP1-225ENST00000600733 SOS2Q07890 1332 aaPredicted RBP23.55■■□□□ 1.36
SHKBP1-225ENST00000600733 MAP3K15Q6ZN16 1313 aa23.55■■□□□ 1.36
SHKBP1-225ENST00000600733 SPTLC2O15270 562 aa23.55■■□□□ 1.36
SHKBP1-225ENST00000600733 TNNT1P13805 278 aa23.55■■□□□ 1.36
SHKBP1-225ENST00000600733 GIGYF2Q6Y7W6 1299 aaKnown RBP23.55■■□□□ 1.36
SHKBP1-225ENST00000600733 FILIP1Q7Z7B0 1213 aa23.55■■□□□ 1.36
SHKBP1-225ENST00000600733 KCNG4Q8TDN1 519 aa23.55■■□□□ 1.36
SHKBP1-225ENST00000600733 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.55■■□□□ 1.365e-7■■■■□ 23.7
SHKBP1-225ENST00000600733 MYO5AQ9Y4I1 1855 aaKnown RBP23.55■■□□□ 1.36
SHKBP1-225ENST00000600733 NEDD4P46934 1319 aa23.55■■□□□ 1.36
SHKBP1-225ENST00000600733 ADD2P35612 726 aa23.54■■□□□ 1.36
SHKBP1-225ENST00000600733 NLRP10Q86W26 655 aa23.54■■□□□ 1.36
SHKBP1-225ENST00000600733 CNNM1Q9NRU3 951 aa23.54■■□□□ 1.36
SHKBP1-225ENST00000600733 YEATS4O95619 227 aa23.54■■□□□ 1.36
SHKBP1-225ENST00000600733 TPD52L1Q16890 204 aaPredicted RBP23.54■■□□□ 1.36
SHKBP1-225ENST00000600733 DPCR1Q3MIW9 517 aa23.54■■□□□ 1.36
SHKBP1-225ENST00000600733 TBC1D10CQ8IV04 446 aa23.54■■□□□ 1.36
SHKBP1-225ENST00000600733 AIFM3Q96NN9 605 aa23.54■■□□□ 1.36
SHKBP1-225ENST00000600733 TAOK2Q9UL54 1235 aa23.54■■□□□ 1.36
SHKBP1-225ENST00000600733 CTIFO43310 598 aaKnown RBP23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 STARD3NLO95772 234 aa23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 RXRAP19793 462 aa23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 BRAPQ7Z569 592 aa23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 PIH1D3Q9NQM4 214 aaKnown RBP23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 KIAA1468Q9P260 1216 aa23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 C4AP0C0L4 1744 aa23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 C4BP0C0L5 1744 aa23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 IDH1O75874 414 aaKnown RBP23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 KIF23Q02241 960 aaPredicted RBP23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 CYB5R4Q7L1T6 521 aa23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 TEX13AQ9BXU3 409 aaPredicted RBP23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 NAT10Q9H0A0 1025 aaKnown RBP23.53■■□□□ 1.36
SHKBP1-225ENST00000600733 APPP05067 770 aa23.52■■□□□ 1.36
SHKBP1-225ENST00000600733 CTSWP56202 376 aa23.52■■□□□ 1.36
SHKBP1-225ENST00000600733 TRDNQ13061 729 aa23.52■■□□□ 1.36
SHKBP1-225ENST00000600733 SYNE3Q6ZMZ3 975 aa23.52■■□□□ 1.36
SHKBP1-225ENST00000600733 CDHR2Q9BYE9 1310 aa23.52■■□□□ 1.36
SHKBP1-225ENST00000600733 USP27XA6NNY8 438 aa23.52■■□□□ 1.36
SHKBP1-225ENST00000600733 VGLL2Q8N8G2 317 aa23.52■■□□□ 1.36
SHKBP1-225ENST00000600733 WDR19Q8NEZ3 1342 aa23.51■■□□□ 1.35
SHKBP1-225ENST00000600733 ANKRD18BA2A2Z9 1011 aa23.51■■□□□ 1.35
SHKBP1-225ENST00000600733 ANO1Q5XXA6 986 aa23.51■■□□□ 1.35
SHKBP1-225ENST00000600733 SENP2Q9HC62 589 aa23.51■■□□□ 1.35
SHKBP1-225ENST00000600733 ANGEL1Q9UNK9 670 aaKnown RBP23.51■■□□□ 1.35
SHKBP1-225ENST00000600733 ABCA3Q99758 1704 aa23.51■■□□□ 1.35
SHKBP1-225ENST00000600733 KAT6BQ8WYB5 2073 aa23.51■■□□□ 1.35
SHKBP1-225ENST00000600733 CCDC69A6NI79 296 aa23.5■■□□□ 1.35
SHKBP1-225ENST00000600733 BIN1O00499 593 aa23.5■■□□□ 1.35
SHKBP1-225ENST00000600733 SKILP12757 684 aa23.5■■□□□ 1.35
SHKBP1-225ENST00000600733 IRS4O14654 1257 aaPredicted RBP23.5■■□□□ 1.35
SHKBP1-225ENST00000600733 ZNF202O95125 648 aa23.5■■□□□ 1.35
SHKBP1-225ENST00000600733 AXDND1Q5T1B0 1012 aaPredicted RBP23.5■■□□□ 1.35
SHKBP1-225ENST00000600733 SLAIN2Q9P270 581 aa23.5■■□□□ 1.35
SHKBP1-225ENST00000600733 ZNF532Q9HCE3 1301 aa23.5■■□□□ 1.35
SHKBP1-225ENST00000600733 SMTNL1A8MU46 457 aa23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 MARCKSP29966 332 aaPredicted RBP23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 PHKA1P46020 1223 aa23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 RBM6P78332 1123 aaKnown RBP23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 MROH7-TTC4A0A0A0MT08 1334 aa23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 ZMYM6O95789 1325 aa23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 B4E1Z4 1266 aa23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 METAP2P50579 478 aaKnown RBP eCLIP23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 ZRSR1Q15695 479 aaKnown RBP23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 PPP4R3BQ5MIZ7 849 aa23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 NBPF11Q86T75 865 aa23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 ANKRD7Q92527 254 aa23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 WWC3Q9ULE0 1092 aa23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.49■■□□□ 1.35
SHKBP1-225ENST00000600733 SH2B2O14492 632 aaPredicted RBP23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 NEMFO60524 1076 aa23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 WDHD1O75717 1129 aaPredicted RBP23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 PDE8BO95263 885 aa23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 SLC3A2P08195 630 aaKnown RBP23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 PFKFB1P16118 471 aa23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 CCZ1BP86790 482 aa23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 CCZ1P86791 482 aaPredicted RBP23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 CCDC102BQ68D86 513 aa23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 PHKBQ93100 1093 aa23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 SLC4A9Q96Q91 983 aa23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 ALG1Q9BT22 464 aa23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 TRMT112Q9UI30 125 aaKnown RBP23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 MYH3P11055 1940 aa23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 ATRNO75882 1429 aa23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 TTF1Q15361 905 aaPredicted RBP23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 MICU3Q86XE3 530 aa23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 PDCL2Q8N4E4 241 aa23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 ZNF512BQ96KM6 892 aaPredicted RBP23.48■■□□□ 1.35
SHKBP1-225ENST00000600733 PDE6AP16499 860 aa23.47■■□□□ 1.35
SHKBP1-225ENST00000600733 CDC27P30260 824 aa23.47■■□□□ 1.35
SHKBP1-225ENST00000600733 APOA5Q6Q788 366 aa23.47■■□□□ 1.35
SHKBP1-225ENST00000600733 ZNF592Q92610 1267 aa23.47■■□□□ 1.35
SHKBP1-225ENST00000600733 INCENPQ9NQS7 918 aa23.47■■□□□ 1.35
SHKBP1-225ENST00000600733 UBE3CQ15386 1083 aa23.47■■□□□ 1.35
SHKBP1-225ENST00000600733 VPS37DQ86XT2 251 aa23.47■■□□□ 1.35
SHKBP1-225ENST00000600733 HELBQ8NG08 1087 aaPredicted RBP23.47■■□□□ 1.35
SHKBP1-225ENST00000600733 ZBTB1Q9Y2K1 713 aa23.47■■□□□ 1.35
SHKBP1-225ENST00000600733 ITGB4P16144 1822 aa23.46■■□□□ 1.35
SHKBP1-225ENST00000600733 CMA1P23946 247 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms