RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 ECM29Q5VYK3 1845 aa22.88■■□□□ 1.25
SHKBP1-202ENST00000593764 FOXN1O15353 648 aa22.88■■□□□ 1.25
SHKBP1-202ENST00000593764 MAP2K1Q02750 393 aaPredicted RBP22.88■■□□□ 1.25
SHKBP1-202ENST00000593764 ZIC5Q96T25 663 aa22.88■■□□□ 1.25
SHKBP1-202ENST00000593764 TDRD3Q9H7E2 651 aaKnown RBP22.88■■□□□ 1.25
SHKBP1-202ENST00000593764 SEMA3EO15041 775 aa22.87■■□□□ 1.25
SHKBP1-202ENST00000593764 MVPQ14764 893 aaKnown RBP22.87■■□□□ 1.25
SHKBP1-202ENST00000593764 SPDYE2Q495Y8 402 aa22.87■■□□□ 1.25
SHKBP1-202ENST00000593764 CEP85Q6P2H3 762 aa22.87■■□□□ 1.25
SHKBP1-202ENST00000593764 ZNF70Q9UC06 446 aaPredicted RBP22.87■■□□□ 1.25
SHKBP1-202ENST00000593764 DENND2AQ9ULE3 1009 aa22.87■■□□□ 1.25
SHKBP1-202ENST00000593764 COG6Q9Y2V7 657 aa22.87■■□□□ 1.25
SHKBP1-202ENST00000593764 NOP58Q9Y2X3 529 aaKnown RBP22.87■■□□□ 1.25
SHKBP1-202ENST00000593764 ZNF157P51786 506 aaPredicted RBP22.86■■□□□ 1.25
SHKBP1-202ENST00000593764 TEKT1Q969V4 418 aa22.86■■□□□ 1.25
SHKBP1-202ENST00000593764 VEZTQ9HBM0 779 aa22.86■■□□□ 1.25
SHKBP1-202ENST00000593764 PAPPA2Q9BXP8 1791 aa22.86■■□□□ 1.25
SHKBP1-202ENST00000593764 MYH13Q9UKX3 1938 aa22.85■■□□□ 1.25
SHKBP1-202ENST00000593764 UBE2Q2LH0YL09 131 aa22.85■■□□□ 1.25
SHKBP1-202ENST00000593764 SURF6O75683 361 aaKnown RBP22.85■■□□□ 1.25
SHKBP1-202ENST00000593764 RASGRF1Q13972 1273 aa22.85■■□□□ 1.25
SHKBP1-202ENST00000593764 APOBEC3HQ6NTF7 200 aaKnown RBP22.85■■□□□ 1.25
SHKBP1-202ENST00000593764 CCDC102AQ96A19 550 aa22.85■■□□□ 1.25
SHKBP1-202ENST00000593764 ZDHHC15Q96MV8 337 aa22.85■■□□□ 1.25
SHKBP1-202ENST00000593764 NEUROD6Q96NK8 337 aa22.85■■□□□ 1.25
SHKBP1-202ENST00000593764 PPP2R3BQ9Y5P8 575 aa22.85■■□□□ 1.25
SHKBP1-202ENST00000593764 SALL1Q9NSC2 1324 aa22.84■■□□□ 1.25
SHKBP1-202ENST00000593764 PRDX5P30044 214 aa22.84■■□□□ 1.25
SHKBP1-202ENST00000593764 NF2P35240 595 aa22.84■■□□□ 1.25
SHKBP1-202ENST00000593764 NOGQ13253 232 aa22.84■■□□□ 1.25
SHKBP1-202ENST00000593764 RASA3Q14644 834 aa22.84■■□□□ 1.25
SHKBP1-202ENST00000593764 COL13A1Q5TAT6 717 aaPredicted RBP22.84■■□□□ 1.25
SHKBP1-202ENST00000593764 HHIPL2Q6UWX4 724 aa22.84■■□□□ 1.25
SHKBP1-202ENST00000593764 ZBTB40Q9NUA8 1239 aa22.84■■□□□ 1.25
SHKBP1-202ENST00000593764 MAST3O60307 1309 aa22.83■■□□□ 1.25
SHKBP1-202ENST00000593764 C20orf194Q5TEA3 1177 aa22.83■■□□□ 1.25
SHKBP1-202ENST00000593764 GPR108Q9NPR9 543 aa22.83■■□□□ 1.25
SHKBP1-202ENST00000593764 DDX19BQ9UMR2 479 aa22.83■■□□□ 1.25
SHKBP1-202ENST00000593764 SLC10A3P09131 477 aa22.82■■□□□ 1.24
SHKBP1-202ENST00000593764 NBPF12Q5TAG4 269 aaPredicted RBP22.82■■□□□ 1.24
SHKBP1-202ENST00000593764 AIDAQ96BJ3 306 aa22.82■■□□□ 1.24
SHKBP1-202ENST00000593764 FZD1Q9UP38 647 aa22.82■■□□□ 1.24
SHKBP1-202ENST00000593764 PDS5AQ29RF7 1337 aaKnown RBP22.82■■□□□ 1.24
SHKBP1-202ENST00000593764 SSC5DA1L4H1 1573 aa22.81■■□□□ 1.24
SHKBP1-202ENST00000593764 LDHBP07195 334 aaKnown RBP22.81■■□□□ 1.24
SHKBP1-202ENST00000593764 PRKG1Q13976 671 aa22.81■■□□□ 1.24
SHKBP1-202ENST00000593764 TTLL12Q14166 644 aaPredicted RBP22.81■■□□□ 1.24
SHKBP1-202ENST00000593764 PDE3AQ14432 1141 aa22.81■■□□□ 1.24
SHKBP1-202ENST00000593764 TNNI3KQ59H18 835 aa22.81■■□□□ 1.24
SHKBP1-202ENST00000593764 RASAL3Q86YV0 1011 aa22.81■■□□□ 1.24
SHKBP1-202ENST00000593764 FPGT-TNNI3KV9GXZ4 949 aa22.81■■□□□ 1.24
SHKBP1-202ENST00000593764 TCP10L2B9ZVM9 353 aa22.8■■□□□ 1.24
SHKBP1-202ENST00000593764 CTCFP49711 727 aaPredicted RBP22.8■■□□□ 1.24
SHKBP1-202ENST00000593764 OS9Q13438 667 aaPredicted RBP22.8■■□□□ 1.24
SHKBP1-202ENST00000593764 TNFAIP1Q13829 316 aa22.8■■□□□ 1.24
SHKBP1-202ENST00000593764 DIXDC1Q155Q3 683 aa22.8■■□□□ 1.24
SHKBP1-202ENST00000593764 LDLRAD1Q5T700 205 aa22.8■■□□□ 1.24
SHKBP1-202ENST00000593764 ARMC9Q7Z3E5 817 aa22.8■■□□□ 1.24
SHKBP1-202ENST00000593764 TEPSINQ96N21 525 aa22.8■■□□□ 1.24
SHKBP1-202ENST00000593764 ARID4AP29374 1257 aaPredicted RBP22.79■■□□□ 1.24
SHKBP1-202ENST00000593764 CACNB3P54284 484 aa22.79■■□□□ 1.24
SHKBP1-202ENST00000593764 KIF23Q02241 960 aaPredicted RBP22.79■■□□□ 1.24
SHKBP1-202ENST00000593764 MAP3K11Q16584 847 aa22.79■■□□□ 1.24
SHKBP1-202ENST00000593764 SUPT20HL1Q3ZLR7 823 aa22.79■■□□□ 1.24
SHKBP1-202ENST00000593764 CDAN1Q8IWY9 1227 aa22.79■■□□□ 1.24
SHKBP1-202ENST00000593764 SIRT2Q8IXJ6 389 aa22.79■■□□□ 1.24
SHKBP1-202ENST00000593764 HMG20BQ9P0W2 317 aa22.79■■□□□ 1.24
SHKBP1-202ENST00000593764 DAGLAQ9Y4D2 1042 aa22.79■■□□□ 1.24
SHKBP1-202ENST00000593764 HSPA8P11142 646 aaKnown RBP22.78■■□□□ 1.24
SHKBP1-202ENST00000593764 GORABQ5T7V8 394 aa22.78■■□□□ 1.24
SHKBP1-202ENST00000593764 PI16Q6UXB8 463 aa22.78■■□□□ 1.24
SHKBP1-202ENST00000593764 TMEM39BQ9GZU3 492 aa22.78■■□□□ 1.24
SHKBP1-202ENST00000593764 ANGEL1Q9UNK9 670 aaKnown RBP22.78■■□□□ 1.24
SHKBP1-202ENST00000593764 LBX1P52954 281 aa22.77■■□□□ 1.24
SHKBP1-202ENST00000593764 FKBP1CQ5VVH2 108 aa22.77■■□□□ 1.24
SHKBP1-202ENST00000593764 RPAP2Q8IXW5 612 aaPredicted RBP22.77■■□□□ 1.24
SHKBP1-202ENST00000593764 ZGPATQ8N5A5 531 aaKnown RBP22.77■■□□□ 1.24
SHKBP1-202ENST00000593764 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.77■■□□□ 1.24
SHKBP1-202ENST00000593764 DBNDD2Q9BQY9 259 aa22.77■■□□□ 1.24
SHKBP1-202ENST00000593764 PPP1R12BO60237 982 aaPredicted RBP22.76■■□□□ 1.23
SHKBP1-202ENST00000593764 USP2O75604 605 aaPredicted RBP22.76■■□□□ 1.23
SHKBP1-202ENST00000593764 MCAMP43121 646 aa22.76■■□□□ 1.23
SHKBP1-202ENST00000593764 SPATA5Q8NB90 893 aa22.76■■□□□ 1.23
SHKBP1-202ENST00000593764 CSRNP1Q96S65 589 aa22.76■■□□□ 1.23
SHKBP1-202ENST00000593764 BEGAINQ9BUH8 593 aa22.76■■□□□ 1.23
SHKBP1-202ENST00000593764 PRDM10Q9NQV6 1147 aa22.76■■□□□ 1.23
SHKBP1-202ENST00000593764 ABCF2Q9UG63 623 aa22.76■■□□□ 1.23
SHKBP1-202ENST00000593764 EXOC6BQ9Y2D4 811 aa22.76■■□□□ 1.23
SHKBP1-202ENST00000593764 TNNI2P48788 182 aa22.75■■□□□ 1.23
SHKBP1-202ENST00000593764 CDC42EP5Q6NZY7 148 aa22.75■■□□□ 1.23
SHKBP1-202ENST00000593764 EAF2Q96CJ1 260 aaPredicted RBP22.75■■□□□ 1.23
SHKBP1-202ENST00000593764 UQCRFS1P1P0C7P4 283 aa22.74■■□□□ 1.23
SHKBP1-202ENST00000593764 SPTY2D1Q68D10 685 aaPredicted RBP22.74■■□□□ 1.23
SHKBP1-202ENST00000593764 FAM83AQ86UY5 434 aa22.74■■□□□ 1.23
SHKBP1-202ENST00000593764 ZNF384Q8TF68 577 aa22.74■■□□□ 1.23
SHKBP1-202ENST00000593764 FAM163AQ96GL9 167 aaPredicted RBP22.74■■□□□ 1.23
SHKBP1-202ENST00000593764 CHMP4BQ9H444 224 aaKnown RBP22.74■■□□□ 1.23
SHKBP1-202ENST00000593764 DBNLQ9UJU6 430 aaKnown RBP22.74■■□□□ 1.23
SHKBP1-202ENST00000593764 TBC1D9Q6ZT07 1266 aa22.73■■□□□ 1.23
SHKBP1-202ENST00000593764 YTHDC1Q96MU7 727 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms