RNA–Protein interactions for RNA: ENST00000591462.5

PRKCSH-212, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKCSH, Length 2,209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-212ENST00000591462 NEUROD6Q96NK8 337 aa16.68■□□□□ 0.26
PRKCSH-212ENST00000591462 CLIC4Q9Y696 253 aa16.68■□□□□ 0.26
PRKCSH-212ENST00000591462 ARFGEF2Q9Y6D5 1785 aa16.67■□□□□ 0.26
PRKCSH-212ENST00000591462 SLFN14P0C7P3 912 aa16.67■□□□□ 0.26
PRKCSH-212ENST00000591462 FOXO4P98177 505 aa16.67■□□□□ 0.26
PRKCSH-212ENST00000591462 ARMCX5Q6P1M9 558 aa16.67■□□□□ 0.26
PRKCSH-212ENST00000591462 FAM196AQ6ZSG2 479 aa16.67■□□□□ 0.26
PRKCSH-212ENST00000591462 LINC00301Q8NCQ3 95 aa16.67■□□□□ 0.26
PRKCSH-212ENST00000591462 UPF1Q92900 1129 aaKnown RBP eCLIP16.67■□□□□ 0.265e-15■■■■■ 62.2
PRKCSH-212ENST00000591462 SYTL4Q96C24 671 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-212ENST00000591462 ERO1AQ96HE7 468 aa16.67■□□□□ 0.26
PRKCSH-212ENST00000591462 FAM53CQ9NYF3 392 aa16.67■□□□□ 0.26
PRKCSH-212ENST00000591462 GABPB1Q06547 395 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-212ENST00000591462 SDF4Q9BRK5 362 aa16.66■□□□□ 0.26
PRKCSH-212ENST00000591462 XPO4Q9C0E2 1151 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-212ENST00000591462 KIAA1468Q9P260 1216 aa16.66■□□□□ 0.26
PRKCSH-212ENST00000591462 A0A1W2PQ27 194 aa16.66■□□□□ 0.26
PRKCSH-212ENST00000591462 A0A1W2PQ64 194 aa16.66■□□□□ 0.26
PRKCSH-212ENST00000591462 A0A1W2PQD8 194 aa16.66■□□□□ 0.26
PRKCSH-212ENST00000591462 M0R2C6 588 aa16.66■□□□□ 0.26
PRKCSH-212ENST00000591462 GSDMDP57764 484 aa16.66■□□□□ 0.26
PRKCSH-212ENST00000591462 LRRN4CLQ8ND94 238 aa16.66■□□□□ 0.26
PRKCSH-212ENST00000591462 NAT10Q9H0A0 1025 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-212ENST00000591462 SNRPA1P09661 255 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-212ENST00000591462 PPP1R13BQ96KQ4 1090 aa16.65■□□□□ 0.26
PRKCSH-212ENST00000591462 GJB4Q9NTQ9 266 aa16.65■□□□□ 0.26
PRKCSH-212ENST00000591462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.65■□□□□ 0.26
PRKCSH-212ENST00000591462 IFNKQ9P0W0 207 aa16.65■□□□□ 0.26
PRKCSH-212ENST00000591462 SLU7O95391 586 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-212ENST00000591462 POLR3DP05423 398 aaPredicted RBP16.65■□□□□ 0.26
PRKCSH-212ENST00000591462 ZNF771Q7L3S4 317 aaPredicted RBP16.65■□□□□ 0.26
PRKCSH-212ENST00000591462 IFNL2Q8IZJ0 200 aa16.65■□□□□ 0.26
PRKCSH-212ENST00000591462 ZNF446Q9NWS9 450 aa16.65■□□□□ 0.26
PRKCSH-212ENST00000591462 IMPACTQ9P2X3 320 aa16.65■□□□□ 0.26
PRKCSH-212ENST00000591462 FOXP2O15409 715 aa16.64■□□□□ 0.25
PRKCSH-212ENST00000591462 EVCP57679 992 aa16.64■□□□□ 0.25
PRKCSH-212ENST00000591462 NCAPHQ15003 741 aa16.64■□□□□ 0.25
PRKCSH-212ENST00000591462 TMC6Q7Z403 805 aa16.64■□□□□ 0.25
PRKCSH-212ENST00000591462 BPIFA3Q9BQP9 254 aa16.64■□□□□ 0.25
PRKCSH-212ENST00000591462 BIN1O00499 593 aa16.64■□□□□ 0.25
PRKCSH-212ENST00000591462 DEFB132Q7Z7B7 95 aa16.64■□□□□ 0.25
PRKCSH-212ENST00000591462 L2HGDHQ9H9P8 463 aa16.64■□□□□ 0.25
PRKCSH-212ENST00000591462 DOT1LQ8TEK3 1739 aa16.63■□□□□ 0.25
PRKCSH-212ENST00000591462 TOGARAM1Q9Y4F4 1720 aa16.63■□□□□ 0.25
PRKCSH-212ENST00000591462 SBF2Q86WG5 1849 aa16.63■□□□□ 0.25
PRKCSH-212ENST00000591462 KIF28PB7ZC32 967 aa16.63■□□□□ 0.25
PRKCSH-212ENST00000591462 RNF113AO15541 343 aaKnown RBP16.63■□□□□ 0.25
PRKCSH-212ENST00000591462 SMC2O95347 1197 aa16.63■□□□□ 0.25
PRKCSH-212ENST00000591462 STK38Q15208 465 aa16.63■□□□□ 0.25
PRKCSH-212ENST00000591462 LRRC24Q50LG9 513 aa16.63■□□□□ 0.25
PRKCSH-212ENST00000591462 KRT222Q8N1A0 295 aa16.63■□□□□ 0.25
PRKCSH-212ENST00000591462 OSBP2Q969R2 916 aa16.63■□□□□ 0.25
PRKCSH-212ENST00000591462 NPHP1O15259 732 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 FBXL16Q8N461 479 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 HPS5Q9UPZ3 1129 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 H7C1W4 665 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 TERF2Q15554 542 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 CCDC93Q567U6 631 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 SYT10Q6XYQ8 523 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 RAB11FIP4Q86YS3 637 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 PLBD2Q8NHP8 589 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 ZNF594Q96JF6 807 aaPredicted RBP16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 FMNL2Q96PY5 1086 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 HSD3B7Q9H2F3 369 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 ST7Q9NRC1 585 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 POLR3EQ9NVU0 708 aa16.62■□□□□ 0.25
PRKCSH-212ENST00000591462 KIF2AO00139 706 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 SPTLC2O15270 562 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 IFIT1P09914 478 aaKnown RBP16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 HAND2P61296 217 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 SF3A1Q15459 793 aaKnown RBP16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 ERCC6LQ2NKX8 1250 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 AXDND1Q5T1B0 1012 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 MYSM1Q5VVJ2 828 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 TTC5Q8N0Z6 440 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 FBXO18Q8NFZ0 1043 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 KCNG4Q8TDN1 519 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 C8orf76Q96K31 380 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 GPR108Q9NPR9 543 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 MROH7-TTC4A0A0A0MT08 1334 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 SOCS7O14512 581 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 ZNF202O95125 648 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 YEATS4O95619 227 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 NLRP12P59046 1061 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 CCDC150Q8NCX0 1101 aa16.61■□□□□ 0.25
PRKCSH-212ENST00000591462 SLC3A2P08195 630 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 H2AFXP16104 143 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 NKX1-1Q15270 411 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 A0A1B0GUL7 405 aa16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 PSDA5PKW4 1024 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 NBPF26B4DH59 902 aa16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 APBA3O96018 575 aa16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 ATP1A3P13637 1013 aa16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 SFPQP23246 707 aaKnown RBP eCLIP16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 IL15P40933 162 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 ANTXR2P58335 489 aa16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 NBPF14Q5TI25 921 aa16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 ISM2Q6H9L7 571 aa16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 NBPF10Q6P3W6 841 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-212ENST00000591462 NBPF15Q8N660 670 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms