RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 RPAP1Q9BWH6 1393 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-212ENST00000591126 HOXC6P09630 235 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 PARP1P09874 1014 aaKnown RBP7.26□□□□□ -1.25
SMAD4-212ENST00000591126 MFSD14CQ5VZR4 134 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 PRR36Q9H6K5 1346 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 VPS37CA5D8V6 355 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-212ENST00000591126 NOP56O00567 594 aaKnown RBP7.26□□□□□ -1.25
SMAD4-212ENST00000591126 CCDC82Q8N4S0 544 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 MRPL50Q8N5N7 158 aaKnown RBP7.26□□□□□ -1.25
SMAD4-212ENST00000591126 MRPL11Q9Y3B7 192 aaKnown RBP7.26□□□□□ -1.25
SMAD4-212ENST00000591126 NEBLO76041 1014 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 IARSP41252 1262 aaKnown RBP7.26□□□□□ -1.25
SMAD4-212ENST00000591126 RBM46Q8TBY0 533 aaKnown RBP7.26□□□□□ -1.25
SMAD4-212ENST00000591126 CDHR1Q96JP9 859 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 SPINK5Q9NQ38 1064 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-212ENST00000591126 ASAP1Q9ULH1 1129 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 SAMM50Q9Y512 469 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 IQGAP1P46940 1657 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 PSDA5PKW4 1024 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-212ENST00000591126 TLR3O15455 904 aaKnown RBP7.26□□□□□ -1.25
SMAD4-212ENST00000591126 SASS6Q6UVJ0 657 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 GADL1Q6ZQY3 521 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 SMARCE1Q969G3 411 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 CCDC8Q9H0W5 538 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-212ENST00000591126 IL1RAPL2Q9NP60 686 aa7.26□□□□□ -1.25
SMAD4-212ENST00000591126 PHLPP2Q6ZVD8 1323 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 KINO60870 393 aaKnown RBP7.25□□□□□ -1.25
SMAD4-212ENST00000591126 CDHR2Q9BYE9 1310 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 H0YCG3 227 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 SNX16P57768 344 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 TAF12Q16514 161 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 LRSAM1Q6UWE0 723 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 DPP9Q86TI2 863 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 ANKRD44Q8N8A2 993 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 FERMT1Q9BQL6 677 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 CARD14Q9BXL6 1004 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 TSPYL2Q9H2G4 693 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-212ENST00000591126 ADGRB2O60241 1585 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 F6X3S4 739 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 KANK3Q6NY19 840 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 FAM160B2Q86V87 743 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 EXOC4Q96A65 974 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 CFAP65Q6ZU64 1925 aaKnown RBP7.25□□□□□ -1.25
SMAD4-212ENST00000591126 FMNL1O95466 1100 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-212ENST00000591126 CASTP20810 708 aaKnown RBP7.25□□□□□ -1.25
SMAD4-212ENST00000591126 ZBTB1Q9Y2K1 713 aa7.25□□□□□ -1.25
SMAD4-212ENST00000591126 VWDEQ8N2E2 1590 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 DNTTIP2Q5QJE6 756 aaKnown RBP7.24□□□□□ -1.25
SMAD4-212ENST00000591126 CWC27Q6UX04 472 aaKnown RBP7.24□□□□□ -1.25
SMAD4-212ENST00000591126 RETREG2Q8NC44 543 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 LGR6Q9HBX8 967 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 EXOC6BQ9Y2D4 811 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 LRRC7Q96NW7 1537 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 EPB41L2O43491 1005 aaKnown RBP7.24□□□□□ -1.25
SMAD4-212ENST00000591126 RPLP2P05387 115 aaKnown RBP7.24□□□□□ -1.25
SMAD4-212ENST00000591126 INHBEP58166 350 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 CHMP4BP1P59074 171 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 NKX1-1Q15270 411 aaPredicted RBP7.24□□□□□ -1.25
SMAD4-212ENST00000591126 AGBL3Q8NEM8 1001 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 ARHGEF1Q92888 912 aaKnown RBP7.24□□□□□ -1.25
SMAD4-212ENST00000591126 TMEM87BQ96K49 555 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 SDF4Q9BRK5 362 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 ZNHIT6Q9NWK9 470 aaKnown RBP7.24□□□□□ -1.25
SMAD4-212ENST00000591126 WDR33Q9C0J8 1336 aaKnown RBP7.24□□□□□ -1.25
SMAD4-212ENST00000591126 CCDC172P0C7W6 258 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 GNAT1P11488 350 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 CAPN2P17655 700 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 NOP2P46087 812 aaKnown RBP7.24□□□□□ -1.25
SMAD4-212ENST00000591126 RAB3GAP1Q15042 981 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 SLC4A8Q2Y0W8 1093 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 MAGEB6Q8N7X4 407 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 SPATA5Q8NB90 893 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 PARK7Q99497 189 aaKnown RBP7.24□□□□□ -1.25
SMAD4-212ENST00000591126 ATP8A2Q9NTI2 1148 aa7.24□□□□□ -1.25
SMAD4-212ENST00000591126 CLTCL1P53675 1640 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 CARNS1A5YM72 827 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 CA12O43570 354 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 TBCAO75347 108 aaKnown RBP7.23□□□□□ -1.25
SMAD4-212ENST00000591126 ASNSP08243 561 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 KRT26Q7Z3Y9 468 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 ZNF526Q8TF50 670 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-212ENST00000591126 APPBP2Q92624 585 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 LBHD1Q9BQE6 289 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-212ENST00000591126 HOXC10Q9NYD6 342 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 NEURL1BA8MQ27 555 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 VAMP4O75379 141 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 NUTM1Q86Y26 1132 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 GOLGA6L1Q8N7Z2 621 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 MSANTD4Q8NCY6 345 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 HAUS2Q9NVX0 235 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 EZH2Q15910 746 aaKnown RBP7.23□□□□□ -1.25
SMAD4-212ENST00000591126 JAKMIP1Q96N16 626 aaKnown RBP7.23□□□□□ -1.25
SMAD4-212ENST00000591126 ZHX3Q9H4I2 956 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 hCG_1984214I3L0E3 225 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 C21orf2O43822 256 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 PPP1R2P41236 205 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 SLC1A4P43007 532 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 ZNF713Q8N859 430 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-212ENST00000591126 HELBQ8NG08 1087 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-212ENST00000591126 EXOC6Q8TAG9 804 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms