RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 EAPPQ56P03 285 aaPredicted RBP23.32■■□□□ 1.32
DDX39A-214ENST00000590556 ERICH6Q7L0X2 663 aa23.32■■□□□ 1.32
DDX39A-214ENST00000590556 TRPM4Q8TD43 1214 aa23.32■■□□□ 1.32
DDX39A-214ENST00000590556 DNAJC2Q99543 621 aaKnown RBP23.32■■□□□ 1.32
DDX39A-214ENST00000590556 HAUS7Q99871 368 aa23.32■■□□□ 1.32
DDX39A-214ENST00000590556 LRP2BPQ9P2M1 347 aa23.32■■□□□ 1.32
DDX39A-214ENST00000590556 KIF3CO14782 793 aa23.31■■□□□ 1.32
DDX39A-214ENST00000590556 KIF4BQ2VIQ3 1234 aa23.31■■□□□ 1.32
DDX39A-214ENST00000590556 RAI14Q9P0K7 980 aa23.31■■□□□ 1.32
DDX39A-214ENST00000590556 STAP2Q9UGK3 403 aa23.31■■□□□ 1.32
DDX39A-214ENST00000590556 EGFRP00533 1210 aa23.3■■□□□ 1.32
DDX39A-214ENST00000590556 RBM5P52756 815 aaKnown RBP eCLIP23.3■■□□□ 1.324e-7■□□□□ 8.1
DDX39A-214ENST00000590556 PDE1AP54750 535 aa23.3■■□□□ 1.32
DDX39A-214ENST00000590556 HDLBPQ00341 1268 aaKnown RBP23.3■■□□□ 1.32
DDX39A-214ENST00000590556 DZIP1Q86YF9 867 aaKnown RBP23.3■■□□□ 1.32
DDX39A-214ENST00000590556 PIH1D3Q9NQM4 214 aaKnown RBP23.3■■□□□ 1.32
DDX39A-214ENST00000590556 SERPINA10Q9UK55 444 aa23.3■■□□□ 1.32
DDX39A-214ENST00000590556 GOLIM4O00461 696 aa23.29■■□□□ 1.32
DDX39A-214ENST00000590556 GLRX3O76003 335 aaKnown RBP23.29■■□□□ 1.32
DDX39A-214ENST00000590556 HIRAP54198 1017 aaPredicted RBP23.29■■□□□ 1.32
DDX39A-214ENST00000590556 TTF1Q15361 905 aaPredicted RBP23.29■■□□□ 1.32
DDX39A-214ENST00000590556 DLGAP5Q15398 846 aa23.29■■□□□ 1.32
DDX39A-214ENST00000590556 CFAP100Q494V2 611 aa23.29■■□□□ 1.32
DDX39A-214ENST00000590556 MRIQ9BWK5 157 aa23.29■■□□□ 1.32
DDX39A-214ENST00000590556 ANTXR1Q9H6X2 564 aa23.29■■□□□ 1.32
DDX39A-214ENST00000590556 PAG1Q9NWQ8 432 aa23.29■■□□□ 1.32
DDX39A-214ENST00000590556 CLEC11AQ9Y240 323 aa23.29■■□□□ 1.32
DDX39A-214ENST00000590556 CRKP46108 304 aa23.28■■□□□ 1.32
DDX39A-214ENST00000590556 PLEKHM2Q8IWE5 1019 aa23.28■■□□□ 1.32
DDX39A-214ENST00000590556 MTMR14Q8NCE2 650 aa23.28■■□□□ 1.32
DDX39A-214ENST00000590556 PI4K2BQ8TCG2 481 aa23.28■■□□□ 1.32
DDX39A-214ENST00000590556 TEKT1Q969V4 418 aa23.28■■□□□ 1.32
DDX39A-214ENST00000590556 MECOMQ03112 1051 aa23.27■■□□□ 1.32
DDX39A-214ENST00000590556 DIXDC1Q155Q3 683 aa23.27■■□□□ 1.32
DDX39A-214ENST00000590556 SLF2Q8IX21 1173 aa23.27■■□□□ 1.32
DDX39A-214ENST00000590556 EDC3Q96F86 508 aaKnown RBP23.27■■□□□ 1.32
DDX39A-214ENST00000590556 MYO5AQ9Y4I1 1855 aaKnown RBP23.26■■□□□ 1.31
DDX39A-214ENST00000590556 IDH1O75874 414 aaKnown RBP23.26■■□□□ 1.31
DDX39A-214ENST00000590556 POTEIP0CG38 1075 aa23.26■■□□□ 1.31
DDX39A-214ENST00000590556 POTEJP0CG39 1038 aa23.26■■□□□ 1.31
DDX39A-214ENST00000590556 PDE4AP27815 886 aa23.26■■□□□ 1.31
DDX39A-214ENST00000590556 GSTO1P78417 241 aa23.26■■□□□ 1.31
DDX39A-214ENST00000590556 HHIPL2Q6UWX4 724 aa23.26■■□□□ 1.31
DDX39A-214ENST00000590556 LDHDQ86WU2 507 aa23.26■■□□□ 1.31
DDX39A-214ENST00000590556 PCDHAC2Q9Y5I4 1007 aa23.26■■□□□ 1.31
DDX39A-214ENST00000590556 AOX1Q06278 1338 aa23.26■■□□□ 1.31
DDX39A-214ENST00000590556 SPDYE2BA6NHP3 402 aa23.25■■□□□ 1.31
DDX39A-214ENST00000590556 WNT10BO00744 389 aa23.25■■□□□ 1.31
DDX39A-214ENST00000590556 IGSF3O75054 1194 aa23.25■■□□□ 1.31
DDX39A-214ENST00000590556 SPDYE6P0CI01 402 aa23.25■■□□□ 1.31
DDX39A-214ENST00000590556 MAP3K12Q12852 859 aa23.25■■□□□ 1.31
DDX39A-214ENST00000590556 NBPF9Q3BBW0 867 aa23.25■■□□□ 1.31
DDX39A-214ENST00000590556 NSUN4Q96CB9 384 aaKnown RBP23.25■■□□□ 1.31
DDX39A-214ENST00000590556 ZBED3Q96IU2 234 aaPredicted RBP23.25■■□□□ 1.31
DDX39A-214ENST00000590556 MYH2Q9UKX2 1941 aa23.24■■□□□ 1.31
DDX39A-214ENST00000590556 MAP4K4O95819 1239 aaPredicted RBP23.24■■□□□ 1.31
DDX39A-214ENST00000590556 LDHCP07864 332 aa23.24■■□□□ 1.31
DDX39A-214ENST00000590556 ZC3H15Q8WU90 426 aaKnown RBP23.24■■□□□ 1.31
DDX39A-214ENST00000590556 PRMT6Q96LA8 375 aaPredicted RBP23.24■■□□□ 1.31
DDX39A-214ENST00000590556 ZDHHC15Q96MV8 337 aa23.24■■□□□ 1.31
DDX39A-214ENST00000590556 OSBPL3Q9H4L5 887 aa23.24■■□□□ 1.31
DDX39A-214ENST00000590556 ADAMTSL1Q8N6G6 1762 aa23.24■■□□□ 1.31
DDX39A-214ENST00000590556 TOMM70O94826 608 aa23.23■■□□□ 1.31
DDX39A-214ENST00000590556 NAA16Q6N069 864 aaPredicted RBP23.23■■□□□ 1.31
DDX39A-214ENST00000590556 ZNF384Q8TF68 577 aa23.23■■□□□ 1.31
DDX39A-214ENST00000590556 DAGLAQ9Y4D2 1042 aa23.23■■□□□ 1.31
DDX39A-214ENST00000590556 DOCK2Q92608 1830 aa23.23■■□□□ 1.31
DDX39A-214ENST00000590556 MYO1BO43795 1136 aa23.22■■□□□ 1.31
DDX39A-214ENST00000590556 CHADLQ6NUI6 762 aa23.22■■□□□ 1.31
DDX39A-214ENST00000590556 FAM163AQ96GL9 167 aaPredicted RBP23.22■■□□□ 1.31
DDX39A-214ENST00000590556 PGAP2Q9UHJ9 254 aa23.22■■□□□ 1.31
DDX39A-214ENST00000590556 ASTN2O75129 1339 aaPredicted RBP23.22■■□□□ 1.31
DDX39A-214ENST00000590556 ANGEL2Q5VTE6 544 aaKnown RBP23.21■■□□□ 1.31
DDX39A-214ENST00000590556 APOBEC3HQ6NTF7 200 aaKnown RBP23.21■■□□□ 1.31
DDX39A-214ENST00000590556 MAGEB6Q8N7X4 407 aa23.21■■□□□ 1.31
DDX39A-214ENST00000590556 RBM46Q8TBY0 533 aaKnown RBP23.21■■□□□ 1.31
DDX39A-214ENST00000590556 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.21■■□□□ 1.311e-7■□□□□ 9.8
DDX39A-214ENST00000590556 GGA3Q9NZ52 723 aa23.21■■□□□ 1.31
DDX39A-214ENST00000590556 MROH7-TTC4A0A0A0MT08 1334 aa23.21■■□□□ 1.31
DDX39A-214ENST00000590556 GAKO14976 1311 aa23.21■■□□□ 1.31
DDX39A-214ENST00000590556 MAST2Q6P0Q8 1798 aa23.21■■□□□ 1.31
DDX39A-214ENST00000590556 SLC9C2Q5TAH2 1124 aa23.2■■□□□ 1.3
DDX39A-214ENST00000590556 TMED8Q6PL24 325 aaPredicted RBP23.2■■□□□ 1.3
DDX39A-214ENST00000590556 DCPSQ96C86 337 aaKnown RBP23.2■■□□□ 1.3
DDX39A-214ENST00000590556 TDRD3Q9H7E2 651 aaKnown RBP23.2■■□□□ 1.3
DDX39A-214ENST00000590556 CYP7A1P22680 504 aa23.19■■□□□ 1.3
DDX39A-214ENST00000590556 MAP1SQ66K74 1059 aaPredicted RBP23.19■■□□□ 1.3
DDX39A-214ENST00000590556 KBTBD3Q8NAB2 608 aa23.19■■□□□ 1.3
DDX39A-214ENST00000590556 SMC1BQ8NDV3 1235 aa23.19■■□□□ 1.3
DDX39A-214ENST00000590556 POLR2AP24928 1970 aaKnown RBP23.19■■□□□ 1.3
DDX39A-214ENST00000590556 ECM29Q5VYK3 1845 aa23.18■■□□□ 1.3
DDX39A-214ENST00000590556 GPR75-ASB3A0A0A6YYF3 556 aa23.18■■□□□ 1.3
DDX39A-214ENST00000590556 CLRN2A0PK11 232 aa23.18■■□□□ 1.3
DDX39A-214ENST00000590556 PDE6AP16499 860 aa23.18■■□□□ 1.3
DDX39A-214ENST00000590556 BTDP43251 543 aa23.18■■□□□ 1.3
DDX39A-214ENST00000590556 ZSCAN25Q6NSZ9 544 aa23.18■■□□□ 1.3
DDX39A-214ENST00000590556 NOL10Q9BSC4 688 aaKnown RBP23.18■■□□□ 1.3
DDX39A-214ENST00000590556 ZNF70Q9UC06 446 aaPredicted RBP23.18■■□□□ 1.3
DDX39A-214ENST00000590556 PITPNM2Q9BZ72 1349 aa23.17■■□□□ 1.3
DDX39A-214ENST00000590556 TRIM6-TRIM34B2RNG4 842 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms