RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 GOLIM4O00461 696 aa18.18■□□□□ 0.5
MBD1-222ENST00000590208 YEATS4O95619 227 aa18.18■□□□□ 0.5
MBD1-222ENST00000590208 MYL5Q02045 173 aa18.18■□□□□ 0.5
MBD1-222ENST00000590208 KARSQ15046 597 aaKnown RBP18.18■□□□□ 0.5
MBD1-222ENST00000590208 HAUS7Q99871 368 aa18.18■□□□□ 0.5
MBD1-222ENST00000590208 TMEM2Q9UHN6 1383 aa18.18■□□□□ 0.5
MBD1-222ENST00000590208 ARHGAP6O43182 974 aa18.17■□□□□ 0.5
MBD1-222ENST00000590208 MYL6BP14649 208 aa18.17■□□□□ 0.5
MBD1-222ENST00000590208 ADKP55263 362 aaKnown RBP18.17■□□□□ 0.5
MBD1-222ENST00000590208 PTPN12Q05209 780 aaKnown RBP18.17■□□□□ 0.5
MBD1-222ENST00000590208 SYNE3Q6ZMZ3 975 aa18.17■□□□□ 0.5
MBD1-222ENST00000590208 ZNF274Q96GC6 653 aaPredicted RBP18.17■□□□□ 0.5
MBD1-222ENST00000590208 AMOTL2Q9Y2J4 779 aa18.17■□□□□ 0.5
MBD1-222ENST00000590208 MED1Q15648 1581 aaPredicted RBP18.17■□□□□ 0.5
MBD1-222ENST00000590208 FBXO18Q8NFZ0 1043 aa18.17■□□□□ 0.5
MBD1-222ENST00000590208 KIFC2Q96AC6 838 aa18.17■□□□□ 0.5
MBD1-222ENST00000590208 ANO1Q5XXA6 986 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 KBTBD3Q8NAB2 608 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 AK7Q96M32 723 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 BAG1Q99933 345 aaPredicted RBP18.16■□□□□ 0.5
MBD1-222ENST00000590208 ATG3Q9NT62 314 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 NEURL1BA8MQ27 555 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 HSPD1P10809 573 aaKnown RBP18.16■□□□□ 0.5
MBD1-222ENST00000590208 CMA1P23946 247 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 SYKP43405 635 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 MCM6Q14566 821 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 MYD88Q99836 296 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 RNMTO43148 476 aaKnown RBP18.16■□□□□ 0.5
MBD1-222ENST00000590208 CBFA2T2O43439 604 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 DDX58O95786 925 aaKnown RBP18.16■□□□□ 0.5
MBD1-222ENST00000590208 GCKRQ14397 625 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 AKAP4Q5JQC9 854 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 SRLQ86TD4 932 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 GOLGA5Q8TBA6 731 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 RABGGTAQ92696 567 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 EXOC4Q96A65 974 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 PDE11AQ9HCR9 933 aa18.16■□□□□ 0.5
MBD1-222ENST00000590208 RRP15Q9Y3B9 282 aaKnown RBP18.16■□□□□ 0.5
MBD1-222ENST00000590208 RFX5P48382 616 aaPredicted RBP18.15■□□□□ 0.5
MBD1-222ENST00000590208 PDIA6Q15084 440 aa18.15■□□□□ 0.5
MBD1-222ENST00000590208 FOXR1Q6PIV2 292 aa18.15■□□□□ 0.5
MBD1-222ENST00000590208 COPRSQ9NQ92 184 aa18.15■□□□□ 0.5
MBD1-222ENST00000590208 CDC27P30260 824 aa18.15■□□□□ 0.5
MBD1-222ENST00000590208 HAND2P61296 217 aa18.15■□□□□ 0.5
MBD1-222ENST00000590208 PDE4BQ07343 736 aa18.15■□□□□ 0.5
MBD1-222ENST00000590208 SUGCTQ9HAC7 445 aa18.15■□□□□ 0.5
MBD1-222ENST00000590208 VPS18Q9P253 973 aa18.15■□□□□ 0.5
MBD1-222ENST00000590208 TUBE1Q9UJT0 475 aa18.15■□□□□ 0.5
MBD1-222ENST00000590208 N4BP1O75113 896 aaKnown RBP18.14■□□□□ 0.49
MBD1-222ENST00000590208 PIP4K2AP48426 406 aaPredicted RBP18.14■□□□□ 0.49
MBD1-222ENST00000590208 FOXP4Q8IVH2 680 aaPredicted RBP18.14■□□□□ 0.49
MBD1-222ENST00000590208 CCDC12Q8WUD4 166 aaPredicted RBP18.14■□□□□ 0.49
MBD1-222ENST00000590208 SH3TC1Q8TE82 1336 aa18.14■□□□□ 0.49
MBD1-222ENST00000590208 MTF1Q14872 753 aa18.14■□□□□ 0.49
MBD1-222ENST00000590208 FCHSD1Q86WN1 690 aa18.14■□□□□ 0.49
MBD1-222ENST00000590208 GOLGA1Q92805 767 aa18.14■□□□□ 0.49
MBD1-222ENST00000590208 DDX21Q9NR30 783 aaKnown RBP eCLIP18.14■□□□□ 0.49
MBD1-222ENST00000590208 CWC15Q9P013 229 aaKnown RBP18.14■□□□□ 0.49
MBD1-222ENST00000590208 PUF60Q9UHX1 559 aaKnown RBP18.14■□□□□ 0.49
MBD1-222ENST00000590208 A0A0U1RQJ8 604 aa18.13■□□□□ 0.49
MBD1-222ENST00000590208 ACTN2P35609 894 aa18.13■□□□□ 0.49
MBD1-222ENST00000590208 TXLNAP40222 546 aa18.13■□□□□ 0.49
MBD1-222ENST00000590208 WWC2Q6AWC2 1192 aa18.13■□□□□ 0.49
MBD1-222ENST00000590208 TC2NQ8N9U0 490 aa18.13■□□□□ 0.49
MBD1-222ENST00000590208 ATRIPQ8WXE1 791 aa18.13■□□□□ 0.49
MBD1-222ENST00000590208 NEUROD6Q96NK8 337 aa18.13■□□□□ 0.49
MBD1-222ENST00000590208 AIFM3Q96NN9 605 aa18.13■□□□□ 0.49
MBD1-222ENST00000590208 CLIC6Q96NY7 704 aa18.13■□□□□ 0.49
MBD1-222ENST00000590208 SHC4Q6S5L8 630 aa18.13■□□□□ 0.49
MBD1-222ENST00000590208 THEMISQ8N1K5 641 aaPredicted RBP18.13■□□□□ 0.49
MBD1-222ENST00000590208 DSCC1Q9BVC3 393 aa18.13■□□□□ 0.49
MBD1-222ENST00000590208 MRPL44Q9H9J2 332 aaKnown RBP18.13■□□□□ 0.49
MBD1-222ENST00000590208 MAP2K7O14733 419 aa18.12■□□□□ 0.49
MBD1-222ENST00000590208 FOXN1O15353 648 aa18.12■□□□□ 0.49
MBD1-222ENST00000590208 TFRCP02786 760 aaKnown RBP18.12■□□□□ 0.49
MBD1-222ENST00000590208 NOP2P46087 812 aaKnown RBP18.12■□□□□ 0.49
MBD1-222ENST00000590208 DHX16O60231 1041 aaKnown RBP18.12■□□□□ 0.49
MBD1-222ENST00000590208 BMP6P22004 513 aa18.12■□□□□ 0.49
MBD1-222ENST00000590208 KIF23Q02241 960 aaPredicted RBP18.12■□□□□ 0.49
MBD1-222ENST00000590208 NEXNQ0ZGT2 675 aa18.12■□□□□ 0.49
MBD1-222ENST00000590208 UBE3BQ7Z3V4 1068 aa18.12■□□□□ 0.49
MBD1-222ENST00000590208 MRC1P22897 1456 aa18.12■□□□□ 0.49
MBD1-222ENST00000590208 UBR1Q8IWV7 1749 aa18.12■□□□□ 0.49
MBD1-222ENST00000590208 KLF18A0A0U1RQI7 1052 aa18.12■□□□□ 0.49
MBD1-222ENST00000590208 CCDC151A5D8V7 595 aa18.12■□□□□ 0.49
MBD1-222ENST00000590208 SLC39A6Q13433 755 aa18.12■□□□□ 0.49
MBD1-222ENST00000590208 XAGE3Q8WTP9 111 aa18.12■□□□□ 0.49
MBD1-222ENST00000590208 PAG1Q9NWQ8 432 aa18.12■□□□□ 0.49
MBD1-222ENST00000590208 GOLGA8BA8MQT2 603 aa18.11■□□□□ 0.49
MBD1-222ENST00000590208 TIMM10P62072 90 aa18.11■□□□□ 0.49
MBD1-222ENST00000590208 TBX2Q13207 712 aaPredicted RBP18.11■□□□□ 0.49
MBD1-222ENST00000590208 SLC39A14Q15043 492 aa18.11■□□□□ 0.49
MBD1-222ENST00000590208 COPS6Q7L5N1 327 aa18.11■□□□□ 0.49
MBD1-222ENST00000590208 METTL16Q86W50 562 aaKnown RBP18.11■□□□□ 0.49
MBD1-222ENST00000590208 IP6K1Q92551 441 aa18.11■□□□□ 0.49
MBD1-222ENST00000590208 LZTFL1Q9NQ48 299 aa18.11■□□□□ 0.49
MBD1-222ENST00000590208 PSD3Q9NYI0 1048 aa18.11■□□□□ 0.49
MBD1-222ENST00000590208 HPS5Q9UPZ3 1129 aa18.11■□□□□ 0.49
MBD1-222ENST00000590208 PCDHA5Q9Y5H7 936 aa18.11■□□□□ 0.49
MBD1-222ENST00000590208 MAST3O60307 1309 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms