RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 TNFAIP1Q13829 316 aa20.45■□□□□ 0.86
MBD3-206ENST00000589901 PKN2Q16513 984 aaKnown RBP20.45■□□□□ 0.86
MBD3-206ENST00000589901 CAVIN4Q5BKX8 364 aa20.45■□□□□ 0.86
MBD3-206ENST00000589901 ECM29Q5VYK3 1845 aa20.44■□□□□ 0.86
MBD3-206ENST00000589901 UNCXA6NJT0 531 aa20.44■□□□□ 0.86
MBD3-206ENST00000589901 TCP10L2B9ZVM9 353 aa20.44■□□□□ 0.86
MBD3-206ENST00000589901 IGF2BP3O00425 579 aaKnown RBP eCLIP20.44■□□□□ 0.86
MBD3-206ENST00000589901 FKTNO75072 461 aa20.44■□□□□ 0.86
MBD3-206ENST00000589901 FRAT2O75474 233 aaPredicted RBP20.44■□□□□ 0.86
MBD3-206ENST00000589901 ALDH1A1P00352 501 aa20.44■□□□□ 0.86
MBD3-206ENST00000589901 TEPSINQ96N21 525 aa20.44■□□□□ 0.86
MBD3-206ENST00000589901 ANKRD13AQ8IZ07 590 aa20.43■□□□□ 0.86
MBD3-206ENST00000589901 TMEM39BQ9GZU3 492 aa20.43■□□□□ 0.86
MBD3-206ENST00000589901 RFX5P48382 616 aaPredicted RBP20.42■□□□□ 0.86
MBD3-206ENST00000589901 ALDH1L2Q3SY69 923 aa20.42■□□□□ 0.86
MBD3-206ENST00000589901 SMC4Q9NTJ3 1288 aa20.42■□□□□ 0.86
MBD3-206ENST00000589901 FGFR2P21802 821 aa20.41■□□□□ 0.86
MBD3-206ENST00000589901 PUM3Q15397 648 aaKnown RBP20.41■□□□□ 0.86
MBD3-206ENST00000589901 TBC1D22AQ8WUA7 517 aa20.41■□□□□ 0.86
MBD3-206ENST00000589901 ELP3Q9H9T3 547 aa20.41■□□□□ 0.86
MBD3-206ENST00000589901 HTTP42858 3142 aa20.41■□□□□ 0.86
MBD3-206ENST00000589901 CACNB3P54284 484 aa20.4■□□□□ 0.86
MBD3-206ENST00000589901 HDLBPQ00341 1268 aaKnown RBP20.4■□□□□ 0.86
MBD3-206ENST00000589901 FBXO46Q6PJ61 603 aaPredicted RBP20.4■□□□□ 0.86
MBD3-206ENST00000589901 EYA2O00167 538 aa20.39■□□□□ 0.85
MBD3-206ENST00000589901 IFIT1P09914 478 aaKnown RBP20.39■□□□□ 0.85
MBD3-206ENST00000589901 TNNI2P48788 182 aa20.39■□□□□ 0.85
MBD3-206ENST00000589901 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.39■□□□□ 0.85
MBD3-206ENST00000589901 TRMT2AQ8IZ69 625 aaKnown RBP20.39■□□□□ 0.85
MBD3-206ENST00000589901 CNKSR2Q8WXI2 1034 aa20.39■□□□□ 0.85
MBD3-206ENST00000589901 TEKT1Q969V4 418 aa20.39■□□□□ 0.85
MBD3-206ENST00000589901 OPTNQ96CV9 577 aa20.39■□□□□ 0.85
MBD3-206ENST00000589901 PTPN18Q99952 460 aa20.39■□□□□ 0.85
MBD3-206ENST00000589901 ARAP2Q8WZ64 1704 aa20.39■□□□□ 0.85
MBD3-206ENST00000589901 KIF16BQ96L93 1317 aa20.38■□□□□ 0.85
MBD3-206ENST00000589901 ATG9AQ7Z3C6 839 aa20.38■□□□□ 0.85
MBD3-206ENST00000589901 TESPA1A2RU30 521 aaPredicted RBP20.37■□□□□ 0.85
MBD3-206ENST00000589901 CRHR2Q13324 411 aa20.37■□□□□ 0.85
MBD3-206ENST00000589901 VGLL4Q14135 290 aa20.37■□□□□ 0.85
MBD3-206ENST00000589901 APOBEC3HQ6NTF7 200 aaKnown RBP20.37■□□□□ 0.85
MBD3-206ENST00000589901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.37■□□□□ 0.85
MBD3-206ENST00000589901 ZDHHC15Q96MV8 337 aa20.37■□□□□ 0.85
MBD3-206ENST00000589901 NOB1Q9ULX3 412 aaKnown RBP20.37■□□□□ 0.85
MBD3-206ENST00000589901 UBTFL1P0CB47 393 aaPredicted RBP20.36■□□□□ 0.85
MBD3-206ENST00000589901 SLC5A1P13866 664 aa20.36■□□□□ 0.85
MBD3-206ENST00000589901 MAP3K9P80192 1104 aa20.36■□□□□ 0.85
MBD3-206ENST00000589901 OTUD7BQ6GQQ9 843 aa20.36■□□□□ 0.85
MBD3-206ENST00000589901 LPIN2Q92539 896 aa20.36■□□□□ 0.85
MBD3-206ENST00000589901 MS4A4AQ96JQ5 239 aa20.36■□□□□ 0.85
MBD3-206ENST00000589901 MRIQ9BWK5 157 aa20.36■□□□□ 0.85
MBD3-206ENST00000589901 SIL1Q9H173 461 aa20.36■□□□□ 0.85
MBD3-206ENST00000589901 TRIM17Q9Y577 477 aa20.36■□□□□ 0.85
MBD3-206ENST00000589901 OTOP1Q7RTM1 612 aa20.35■□□□□ 0.85
MBD3-206ENST00000589901 SUGT1Q9Y2Z0 365 aa20.35■□□□□ 0.85
MBD3-206ENST00000589901 TMOD2Q9NZR1 351 aa20.34■□□□□ 0.85
MBD3-206ENST00000589901 OTOFQ9HC10 1997 aa20.34■□□□□ 0.85
MBD3-206ENST00000589901 MAST3O60307 1309 aa20.33■□□□□ 0.85
MBD3-206ENST00000589901 HHIPL2Q6UWX4 724 aa20.33■□□□□ 0.85
MBD3-206ENST00000589901 WDR66Q8TBY9 1149 aa20.33■□□□□ 0.85
MBD3-206ENST00000589901 CD99L2Q8TCZ2 262 aa20.33■□□□□ 0.85
MBD3-206ENST00000589901 BRI3BPQ8WY22 251 aa20.33■□□□□ 0.85
MBD3-206ENST00000589901 OTUD5Q96G74 571 aa20.33■□□□□ 0.85
MBD3-206ENST00000589901 CSADQ9Y600 493 aa20.33■□□□□ 0.85
MBD3-206ENST00000589901 CENPFP49454 3210 aa20.33■□□□□ 0.84
MBD3-206ENST00000589901 CT47B1P0C2W7 299 aaPredicted RBP20.32■□□□□ 0.84
MBD3-206ENST00000589901 FAM83AQ86UY5 434 aa20.32■□□□□ 0.84
MBD3-206ENST00000589901 LRRFIP2Q9Y608 721 aaKnown RBP20.32■□□□□ 0.84
MBD3-206ENST00000589901 LAMB1P07942 1786 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 CCL15-CCL14A0A0B4J2E2 113 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 CIAO1O76071 339 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 GTF2A2P52657 109 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 CAP1Q01518 475 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 CCL15Q16663 113 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 ATP2B3Q16720 1220 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 FKBP1CQ5VVH2 108 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 ZKSCAN4Q969J2 545 aaPredicted RBP20.31■□□□□ 0.84
MBD3-206ENST00000589901 ERO1AQ96HE7 468 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 WRNIP1Q96S55 665 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 API5Q9BZZ5 524 aaKnown RBP20.31■□□□□ 0.84
MBD3-206ENST00000589901 CEP126Q9P2H0 1117 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 FBXO3Q9UK99 471 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 PA2G4Q9UQ80 394 aaKnown RBP20.31■□□□□ 0.84
MBD3-206ENST00000589901 SNCAIPQ9Y6H5 919 aa20.31■□□□□ 0.84
MBD3-206ENST00000589901 SLC34A2O95436 690 aa20.3■□□□□ 0.84
MBD3-206ENST00000589901 PRDX5P30044 214 aa20.3■□□□□ 0.84
MBD3-206ENST00000589901 SP3Q02447 781 aa20.3■□□□□ 0.84
MBD3-206ENST00000589901 DIXDC1Q155Q3 683 aa20.3■□□□□ 0.84
MBD3-206ENST00000589901 FAM43AQ8N2R8 423 aa20.3■□□□□ 0.84
MBD3-206ENST00000589901 DAGLAQ9Y4D2 1042 aa20.3■□□□□ 0.84
MBD3-206ENST00000589901 PDE4DIPQ5VU43 2346 aa20.29■□□□□ 0.84
MBD3-206ENST00000589901 SPDYE5A6NIY4 337 aa20.29■□□□□ 0.84
MBD3-206ENST00000589901 MIGA2Q7L4E1 593 aa20.29■□□□□ 0.84
MBD3-206ENST00000589901 MEIS3Q99687 375 aa20.29■□□□□ 0.84
MBD3-206ENST00000589901 PTPN22Q9Y2R2 807 aa20.29■□□□□ 0.84
MBD3-206ENST00000589901 IL15P40933 162 aaPredicted RBP20.28■□□□□ 0.84
MBD3-206ENST00000589901 PHKA1P46020 1223 aa20.28■□□□□ 0.84
MBD3-206ENST00000589901 RARSP54136 660 aaKnown RBP20.28■□□□□ 0.84
MBD3-206ENST00000589901 TAF1CQ15572 869 aaPredicted RBP20.28■□□□□ 0.84
MBD3-206ENST00000589901 CDC42EP5Q6NZY7 148 aa20.28■□□□□ 0.84
MBD3-206ENST00000589901 ERO1BQ86YB8 467 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms