RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ZAP70P43403 619 aa23.82■■□□□ 1.4
CIRBP-220ENST00000588917 ZNF280AP59817 542 aaPredicted RBP23.82■■□□□ 1.4
CIRBP-220ENST00000588917 HDLBPQ00341 1268 aaKnown RBP23.82■■□□□ 1.4
CIRBP-220ENST00000588917 ERICH6Q7L0X2 663 aa23.82■■□□□ 1.4
CIRBP-220ENST00000588917 SLF2Q8IX21 1173 aa23.82■■□□□ 1.4
CIRBP-220ENST00000588917 HAUS7Q99871 368 aa23.82■■□□□ 1.4
CIRBP-220ENST00000588917 BOLA2Q9H3K6 86 aa23.82■■□□□ 1.4
CIRBP-220ENST00000588917 LRP2BPQ9P2M1 347 aa23.82■■□□□ 1.4
CIRBP-220ENST00000588917 TTF2Q9UNY4 1162 aaKnown RBP23.82■■□□□ 1.4
CIRBP-220ENST00000588917 CYP2E1P05181 493 aaPredicted RBP23.81■■□□□ 1.4
CIRBP-220ENST00000588917 EPS15P42566 896 aa23.81■■□□□ 1.4
CIRBP-220ENST00000588917 PDE1AP54750 535 aa23.81■■□□□ 1.4
CIRBP-220ENST00000588917 TMED8Q6PL24 325 aaPredicted RBP23.81■■□□□ 1.4
CIRBP-220ENST00000588917 USP50Q70EL3 339 aaPredicted RBP23.81■■□□□ 1.4
CIRBP-220ENST00000588917 SALL3Q9BXA9 1300 aa23.81■■□□□ 1.4
CIRBP-220ENST00000588917 PSME4Q14997 1843 aa23.8■■□□□ 1.4
CIRBP-220ENST00000588917 F8W031 263 aaPredicted RBP23.8■■□□□ 1.4
CIRBP-220ENST00000588917 EPHX2P34913 555 aa23.8■■□□□ 1.4
CIRBP-220ENST00000588917 PI16Q6UXB8 463 aa23.8■■□□□ 1.4
CIRBP-220ENST00000588917 OSBPL3Q9H4L5 887 aa23.8■■□□□ 1.4
CIRBP-220ENST00000588917 SERPINA10Q9UK55 444 aa23.8■■□□□ 1.4
CIRBP-220ENST00000588917 EAPPQ56P03 285 aaPredicted RBP23.79■■□□□ 1.4
CIRBP-220ENST00000588917 OTUD7AQ8TE49 926 aaPredicted RBP23.79■■□□□ 1.4
CIRBP-220ENST00000588917 MYOZ2Q9NPC6 264 aa23.79■■□□□ 1.4
CIRBP-220ENST00000588917 MKRN1Q9UHC7 482 aaKnown RBP23.79■■□□□ 1.4
CIRBP-220ENST00000588917 AOX1Q06278 1338 aa23.79■■□□□ 1.4
CIRBP-220ENST00000588917 PASKQ96RG2 1323 aa23.79■■□□□ 1.4
CIRBP-220ENST00000588917 GSTO1P78417 241 aa23.78■■□□□ 1.4
CIRBP-220ENST00000588917 TBC1D9Q6ZT07 1266 aa23.78■■□□□ 1.4
CIRBP-220ENST00000588917 TNS4Q8IZW8 715 aa23.78■■□□□ 1.4
CIRBP-220ENST00000588917 DNAJC2Q99543 621 aaKnown RBP23.78■■□□□ 1.4
CIRBP-220ENST00000588917 PAG1Q9NWQ8 432 aa23.78■■□□□ 1.4
CIRBP-220ENST00000588917 RAI14Q9P0K7 980 aa23.78■■□□□ 1.4
CIRBP-220ENST00000588917 COL1A1P02452 1464 aaPredicted RBP23.78■■□□□ 1.4
CIRBP-220ENST00000588917 SCN4AP35499 1836 aa23.77■■□□□ 1.4
CIRBP-220ENST00000588917 ITGBL1O95965 494 aaPredicted RBP23.77■■□□□ 1.4
CIRBP-220ENST00000588917 LDHCP07864 332 aa23.77■■□□□ 1.4
CIRBP-220ENST00000588917 PRDX5P30044 214 aa23.77■■□□□ 1.4
CIRBP-220ENST00000588917 MAP3K12Q12852 859 aa23.77■■□□□ 1.4
CIRBP-220ENST00000588917 DLGAP5Q15398 846 aa23.77■■□□□ 1.4
CIRBP-220ENST00000588917 HHIPL2Q6UWX4 724 aa23.77■■□□□ 1.4
CIRBP-220ENST00000588917 DZIP1Q86YF9 867 aaKnown RBP23.77■■□□□ 1.4
CIRBP-220ENST00000588917 PLEKHM2Q8IWE5 1019 aa23.77■■□□□ 1.4
CIRBP-220ENST00000588917 MTMR14Q8NCE2 650 aa23.77■■□□□ 1.4
CIRBP-220ENST00000588917 PI4K2BQ8TCG2 481 aa23.77■■□□□ 1.4
CIRBP-220ENST00000588917 TEKT1Q969V4 418 aa23.77■■□□□ 1.4
CIRBP-220ENST00000588917 CLEC11AQ9Y240 323 aa23.77■■□□□ 1.4
CIRBP-220ENST00000588917 GOLIM4O00461 696 aa23.76■■□□□ 1.39
CIRBP-220ENST00000588917 RBM5P52756 815 aaKnown RBP eCLIP23.76■■□□□ 1.392e-7■□□□□ 11
CIRBP-220ENST00000588917 GRIK5Q16478 980 aa23.75■■□□□ 1.39
CIRBP-220ENST00000588917 LRRFIP1Q32MZ4 808 aaKnown RBP23.75■■□□□ 1.39
CIRBP-220ENST00000588917 RBM26Q5T8P6 1007 aaKnown RBP23.75■■□□□ 1.39
CIRBP-220ENST00000588917 SAMD7Q7Z3H4 446 aa23.75■■□□□ 1.39
CIRBP-220ENST00000588917 ZC3H15Q8WU90 426 aaKnown RBP23.75■■□□□ 1.39
CIRBP-220ENST00000588917 FAM163AQ96GL9 167 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-220ENST00000588917 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.75■■□□□ 1.392e-6■■■□□ 14.6
CIRBP-220ENST00000588917 TMEM88BA6NKF7 163 aa23.74■■□□□ 1.39
CIRBP-220ENST00000588917 MYO1BO43795 1136 aa23.74■■□□□ 1.39
CIRBP-220ENST00000588917 IDH1O75874 414 aaKnown RBP23.74■■□□□ 1.39
CIRBP-220ENST00000588917 KIF4BQ2VIQ3 1234 aa23.74■■□□□ 1.39
CIRBP-220ENST00000588917 CFAP100Q494V2 611 aa23.74■■□□□ 1.39
CIRBP-220ENST00000588917 TBC1D10BQ4KMP7 808 aaPredicted RBP23.74■■□□□ 1.39
CIRBP-220ENST00000588917 TSHZ3Q63HK5 1081 aa23.74■■□□□ 1.39
CIRBP-220ENST00000588917 ZSCAN25Q6NSZ9 544 aa23.74■■□□□ 1.39
CIRBP-220ENST00000588917 ANTXR1Q9H6X2 564 aa23.74■■□□□ 1.39
CIRBP-220ENST00000588917 MYH13Q9UKX3 1938 aa23.74■■□□□ 1.39
CIRBP-220ENST00000588917 CRKP46108 304 aa23.73■■□□□ 1.39
CIRBP-220ENST00000588917 MECOMQ03112 1051 aa23.73■■□□□ 1.39
CIRBP-220ENST00000588917 TICAM2Q86XR7 235 aa23.73■■□□□ 1.39
CIRBP-220ENST00000588917 NSUN4Q96CB9 384 aaKnown RBP23.73■■□□□ 1.39
CIRBP-220ENST00000588917 PIH1D3Q9NQM4 214 aaKnown RBP23.73■■□□□ 1.39
CIRBP-220ENST00000588917 NDUFB9Q9Y6M9 179 aa23.73■■□□□ 1.39
CIRBP-220ENST00000588917 CNTNAP1P78357 1384 aa23.73■■□□□ 1.39
CIRBP-220ENST00000588917 SHTN1A0MZ66 631 aa23.72■■□□□ 1.39
CIRBP-220ENST00000588917 PDE4AP27815 886 aa23.72■■□□□ 1.39
CIRBP-220ENST00000588917 NAA16Q6N069 864 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-220ENST00000588917 CNTROBQ8N137 903 aa23.72■■□□□ 1.39
CIRBP-220ENST00000588917 ZDHHC15Q96MV8 337 aa23.72■■□□□ 1.39
CIRBP-220ENST00000588917 ZNF646O15015 1829 aaPredicted RBP23.71■■□□□ 1.39
CIRBP-220ENST00000588917 EVI5LQ96CN4 794 aa23.71■■□□□ 1.39
CIRBP-220ENST00000588917 NOL10Q9BSC4 688 aaKnown RBP23.71■■□□□ 1.39
CIRBP-220ENST00000588917 AKAP11Q9UKA4 1901 aa23.71■■□□□ 1.39
CIRBP-220ENST00000588917 SPDYE2BA6NHP3 402 aa23.7■■□□□ 1.38
CIRBP-220ENST00000588917 WNT10BO00744 389 aa23.7■■□□□ 1.38
CIRBP-220ENST00000588917 SPDYE6P0CI01 402 aa23.7■■□□□ 1.38
CIRBP-220ENST00000588917 MAP1SQ66K74 1059 aaPredicted RBP23.7■■□□□ 1.38
CIRBP-220ENST00000588917 KBTBD3Q8NAB2 608 aa23.7■■□□□ 1.38
CIRBP-220ENST00000588917 ZBED3Q96IU2 234 aaPredicted RBP23.7■■□□□ 1.38
CIRBP-220ENST00000588917 PGAP2Q9UHJ9 254 aa23.7■■□□□ 1.38
CIRBP-220ENST00000588917 BAG3O95817 575 aa23.69■■□□□ 1.38
CIRBP-220ENST00000588917 MAP4K4O95819 1239 aaPredicted RBP23.69■■□□□ 1.38
CIRBP-220ENST00000588917 HIRAP54198 1017 aaPredicted RBP23.69■■□□□ 1.38
CIRBP-220ENST00000588917 SLC9C2Q5TAH2 1124 aa23.69■■□□□ 1.38
CIRBP-220ENST00000588917 CERS3Q8IU89 383 aa23.69■■□□□ 1.38
CIRBP-220ENST00000588917 TRPM4Q8TD43 1214 aa23.69■■□□□ 1.38
CIRBP-220ENST00000588917 PRMT6Q96LA8 375 aaPredicted RBP23.69■■□□□ 1.38
CIRBP-220ENST00000588917 ZFYP08048 801 aaPredicted RBP23.68■■□□□ 1.38
CIRBP-220ENST00000588917 DIXDC1Q155Q3 683 aa23.68■■□□□ 1.38
CIRBP-220ENST00000588917 DCPSQ96C86 337 aaKnown RBP23.68■■□□□ 1.38
CIRBP-220ENST00000588917 EDC3Q96F86 508 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms