RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 CCL15Q16663 113 aa21.13■□□□□ 0.97
SEC11C-205ENST00000588875 CCDC57Q2TAC2 916 aa21.13■□□□□ 0.97
SEC11C-205ENST00000588875 DZIP1LQ8IYY4 767 aaKnown RBP21.13■□□□□ 0.97
SEC11C-205ENST00000588875 FAM43AQ8N2R8 423 aa21.13■□□□□ 0.97
SEC11C-205ENST00000588875 FAM84BQ96KN1 310 aaPredicted RBP21.13■□□□□ 0.97
SEC11C-205ENST00000588875 TMEM39BQ9GZU3 492 aa21.13■□□□□ 0.97
SEC11C-205ENST00000588875 ZFYVE28Q9HCC9 887 aa21.13■□□□□ 0.97
SEC11C-205ENST00000588875 CNNM1Q9NRU3 951 aa21.13■□□□□ 0.97
SEC11C-205ENST00000588875 GYG1P46976 350 aa21.12■□□□□ 0.97
SEC11C-205ENST00000588875 HIBADHP31937 336 aaKnown RBP21.11■□□□□ 0.97
SEC11C-205ENST00000588875 GTF2A2P52657 109 aa21.11■□□□□ 0.97
SEC11C-205ENST00000588875 GRIK5Q16478 980 aa21.11■□□□□ 0.97
SEC11C-205ENST00000588875 SLC9C1Q4G0N8 1177 aa21.11■□□□□ 0.97
SEC11C-205ENST00000588875 TAF7LQ5H9L4 462 aa21.11■□□□□ 0.97
SEC11C-205ENST00000588875 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.11■□□□□ 0.974e-7■■□□□ 11.9
SEC11C-205ENST00000588875 COLQQ9Y215 455 aaPredicted RBP21.11■□□□□ 0.97
SEC11C-205ENST00000588875 A0A1B0GUL6 1792 aa21.1■□□□□ 0.97
SEC11C-205ENST00000588875 FANCIQ9NVI1 1328 aa21.1■□□□□ 0.97
SEC11C-205ENST00000588875 CRKP46108 304 aa21.1■□□□□ 0.97
SEC11C-205ENST00000588875 UBE4AQ14139 1066 aa21.1■□□□□ 0.97
SEC11C-205ENST00000588875 NBPF11Q86T75 865 aa21.1■□□□□ 0.97
SEC11C-205ENST00000588875 OTUD5Q96G74 571 aa21.1■□□□□ 0.97
SEC11C-205ENST00000588875 PUS3Q9BZE2 481 aaKnown RBP21.1■□□□□ 0.97
SEC11C-205ENST00000588875 OTOFQ9HC10 1997 aa21.09■□□□□ 0.97
SEC11C-205ENST00000588875 CEP290O15078 2479 aa21.09■□□□□ 0.97
SEC11C-205ENST00000588875 GRM8O00222 908 aa21.09■□□□□ 0.97
SEC11C-205ENST00000588875 MYCP01106 439 aaPredicted RBP21.09■□□□□ 0.97
SEC11C-205ENST00000588875 ARHGEF6Q15052 776 aa21.09■□□□□ 0.97
SEC11C-205ENST00000588875 EXOSC9Q06265 439 aaKnown RBP21.08■□□□□ 0.97
SEC11C-205ENST00000588875 SLC4A8Q2Y0W8 1093 aa21.08■□□□□ 0.97
SEC11C-205ENST00000588875 ARHGAP39Q9C0H5 1083 aa21.08■□□□□ 0.97
SEC11C-205ENST00000588875 CSADQ9Y600 493 aa21.08■□□□□ 0.97
SEC11C-205ENST00000588875 SPDYE5A6NIY4 337 aa21.07■□□□□ 0.96
SEC11C-205ENST00000588875 TNNI2P48788 182 aa21.07■□□□□ 0.96
SEC11C-205ENST00000588875 SH3TC2Q8TF17 1288 aa21.07■□□□□ 0.96
SEC11C-205ENST00000588875 TLR2O60603 784 aa21.06■□□□□ 0.96
SEC11C-205ENST00000588875 CACNB3P54284 484 aa21.06■□□□□ 0.96
SEC11C-205ENST00000588875 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
SEC11C-205ENST00000588875 SNCAIPQ9Y6H5 919 aa21.06■□□□□ 0.96
SEC11C-205ENST00000588875 BTBD19C9JJ37 291 aa21.05■□□□□ 0.96
SEC11C-205ENST00000588875 H0YGN5 161 aa21.05■□□□□ 0.96
SEC11C-205ENST00000588875 LACTBP83111 547 aaPredicted RBP21.05■□□□□ 0.96
SEC11C-205ENST00000588875 FBXO33Q7Z6M2 555 aa21.05■□□□□ 0.96
SEC11C-205ENST00000588875 ZKSCAN4Q969J2 545 aaPredicted RBP21.05■□□□□ 0.96
SEC11C-205ENST00000588875 KAZALD1Q96I82 304 aa21.05■□□□□ 0.96
SEC11C-205ENST00000588875 IQSEC3Q9UPP2 1182 aaPredicted RBP21.05■□□□□ 0.96
SEC11C-205ENST00000588875 RIPOR2Q9Y4F9 1068 aa21.05■□□□□ 0.96
SEC11C-205ENST00000588875 CETPP11597 493 aa21.04■□□□□ 0.96
SEC11C-205ENST00000588875 ERO1BQ86YB8 467 aa21.04■□□□□ 0.96
SEC11C-205ENST00000588875 C9orf78Q9NZ63 289 aaPredicted RBP21.04■□□□□ 0.96
SEC11C-205ENST00000588875 TRIOBPQ9H2D6 2365 aa21.03■□□□□ 0.96
SEC11C-205ENST00000588875 IRF6O14896 467 aa21.03■□□□□ 0.96
SEC11C-205ENST00000588875 ANP32CO43423 234 aa21.03■□□□□ 0.96
SEC11C-205ENST00000588875 HDLBPQ00341 1268 aaKnown RBP21.03■□□□□ 0.96
SEC11C-205ENST00000588875 CHAF1AQ13111 956 aaPredicted RBP21.03■□□□□ 0.96
SEC11C-205ENST00000588875 SUCLG2Q96I99 432 aa21.03■□□□□ 0.96
SEC11C-205ENST00000588875 WDR63Q8IWG1 891 aa21.02■□□□□ 0.96
SEC11C-205ENST00000588875 WRNIP1Q96S55 665 aa21.02■□□□□ 0.96
SEC11C-205ENST00000588875 ZCCHC17Q9NP64 241 aaKnown RBP21.02■□□□□ 0.96
SEC11C-205ENST00000588875 SALL2Q9Y467 1007 aaPredicted RBP21.02■□□□□ 0.96
SEC11C-205ENST00000588875 WDHD1O75717 1129 aaPredicted RBP21.01■□□□□ 0.95
SEC11C-205ENST00000588875 ALDH1L1O75891 902 aa21.01■□□□□ 0.95
SEC11C-205ENST00000588875 ECM2O94769 699 aaPredicted RBP21.01■□□□□ 0.95
SEC11C-205ENST00000588875 CTGFP29279 349 aa21.01■□□□□ 0.95
SEC11C-205ENST00000588875 SNAPC2Q13487 334 aa21.01■□□□□ 0.95
SEC11C-205ENST00000588875 KIF22Q14807 665 aa21.01■□□□□ 0.95
SEC11C-205ENST00000588875 SPINK5Q9NQ38 1064 aaPredicted RBP21.01■□□□□ 0.95
SEC11C-205ENST00000588875 SZT2Q5T011 3432 aa21■□□□□ 0.95
SEC11C-205ENST00000588875 PPIL2Q13356 520 aa21■□□□□ 0.95
SEC11C-205ENST00000588875 LRRC24Q50LG9 513 aa21■□□□□ 0.95
SEC11C-205ENST00000588875 APOBEC3HQ6NTF7 200 aaKnown RBP21■□□□□ 0.95
SEC11C-205ENST00000588875 C17orf99Q6UX52 265 aa21■□□□□ 0.95
SEC11C-205ENST00000588875 VPS37DQ86XT2 251 aa21■□□□□ 0.95
SEC11C-205ENST00000588875 TEKT1Q969V4 418 aa21■□□□□ 0.95
SEC11C-205ENST00000588875 ZDHHC15Q96MV8 337 aa21■□□□□ 0.95
SEC11C-205ENST00000588875 MRIQ9BWK5 157 aa21■□□□□ 0.95
SEC11C-205ENST00000588875 MROH5Q6ZUA9 1318 aa21■□□□□ 0.95
SEC11C-205ENST00000588875 ZSWIM8A7E2V4 1837 aa20.99■□□□□ 0.95
SEC11C-205ENST00000588875 ARAP2Q8WZ64 1704 aa20.99■□□□□ 0.95
SEC11C-205ENST00000588875 GNRH1P01148 92 aa20.99■□□□□ 0.95
SEC11C-205ENST00000588875 NBPF7P0C2Y1 421 aaPredicted RBP20.99■□□□□ 0.95
SEC11C-205ENST00000588875 MTFR1Q15390 333 aa20.99■□□□□ 0.95
SEC11C-205ENST00000588875 SLC4A10Q6U841 1118 aa20.99■□□□□ 0.95
SEC11C-205ENST00000588875 FAM83AQ86UY5 434 aa20.99■□□□□ 0.95
SEC11C-205ENST00000588875 TBC1D22AQ8WUA7 517 aa20.99■□□□□ 0.95
SEC11C-205ENST00000588875 SHISA4Q96DD7 197 aa20.99■□□□□ 0.95
SEC11C-205ENST00000588875 SRCIN1Q9C0H9 1055 aa20.99■□□□□ 0.95
SEC11C-205ENST00000588875 CACNA1FO60840 1977 aa20.99■□□□□ 0.95
SEC11C-205ENST00000588875 PRMT2P55345 433 aa20.98■□□□□ 0.95
SEC11C-205ENST00000588875 FKBP1CQ5VVH2 108 aa20.98■□□□□ 0.95
SEC11C-205ENST00000588875 CPA4Q9UI42 421 aa20.98■□□□□ 0.95
SEC11C-205ENST00000588875 FRAT2O75474 233 aaPredicted RBP20.97■□□□□ 0.95
SEC11C-205ENST00000588875 INPP5BP32019 993 aa20.97■□□□□ 0.95
SEC11C-205ENST00000588875 BCAMP50895 628 aa20.97■□□□□ 0.95
SEC11C-205ENST00000588875 MIGA2Q7L4E1 593 aa20.97■□□□□ 0.95
SEC11C-205ENST00000588875 VGLL2Q8N8G2 317 aa20.97■□□□□ 0.95
SEC11C-205ENST00000588875 TRIM47Q96LD4 638 aa20.97■□□□□ 0.95
SEC11C-205ENST00000588875 RANBP2P49792 3224 aaKnown RBP20.97■□□□□ 0.95
SEC11C-205ENST00000588875 PSMC4P43686 418 aa20.96■□□□□ 0.95
SEC11C-205ENST00000588875 PPATQ06203 517 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms